FFCP PHASE1:Hg19::chr17:46507625..46507635,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8631 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15605 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WV1 | |||
|association_with_transcript=-31bp_to_ENST00000336915,NM_001075099,NM_003726,uc002ini.1,uc002inj.1,uc010dbd.1,uc010dbe.1_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_SKAP1_5end | |||
|id=chr17:46507625..46507635,- | |||
|ontology_enrichment_celltype=CL:0000542!3.01e-29!53;CL:0000051!3.01e-29!53;CL:0000838!5.30e-28!52;CL:0000738!2.49e-16!140;CL:0002031!1.48e-15!124;CL:0000037!3.40e-15!172;CL:0000566!3.40e-15!172;CL:0000791!7.59e-15!18;CL:0000789!7.59e-15!18;CL:0002420!7.59e-15!18;CL:0002419!7.59e-15!18;CL:0000790!7.59e-15!18;CL:0000988!1.22e-13!182;CL:0000084!1.43e-13!25;CL:0000827!1.43e-13!25;CL:0002087!3.87e-13!119;CL:0002032!8.16e-13!165;CL:0000837!8.16e-13!165;CL:0002274!4.01e-12!5;CL:0000457!4.01e-12!5;CL:0002191!4.01e-12!5;CL:0000097!4.01e-12!5;CL:0000831!4.01e-12!5;CL:0002028!4.01e-12!5;CL:0000945!3.31e-11!24;CL:0000826!3.31e-11!24;CL:0000163!1.06e-08!9;CL:0000624!2.12e-08!6;CL:0000623!1.92e-07!3;CL:0000825!1.92e-07!3;CL:0000625!7.06e-07!11;CL:0000842!7.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.58e-56;5!CL:0000163;2.40e-31;9!CL:0000625;3.22e-16;11!CL:0000623;1.32e-15;3!CL:0000791;3.54e-15;18!CL:0000789;3.54e-15;18!CL:0002419;3.54e-15;18!CL:0002127;2.46e-12;1!CL:0000911;2.46e-12;1!CL:0000814;2.46e-12;1!CL:0000084;6.51e-11;25!CL:0000542;2.79e-09;53!CL:0000151;2.90e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.32e-56,5;CL:0002028,2.32e-56,5;CL:0000163,2.26e-31,9;CL:0000625,3.22e-16,11;CL:0002031,4.73e-16,120;CL:0000838,5.09e-16,52;CL:0000623,7.83e-16,3;CL:0000825,7.83e-16,3;CL:0000542,1.07e-15,53;CL:0000051,1.07e-15,53;CL:0000791,3.54e-15,18;CL:0000789,3.54e-15,18;CL:0002420,3.54e-15,18;CL:0002419,3.54e-15,18;CL:0000790,3.54e-15,18;CL:0000738,6.02e-14,136;CL:0002127,2.46e-12,1;CL:0000914,2.46e-12,1;CL:0000911,2.46e-12,1;CL:0000814,2.46e-12,1;CL:0002042,2.46e-12,1;CL:0002039,2.46e-12,1;CL:0002040,2.46e-12,1;CL:0002041,2.46e-12,1;CL:0002032,1.74e-11,161;CL:0000837,1.74e-11,161;CL:0000037,6.33e-11,168;CL:0000084,6.52e-11,25;CL:0000827,6.52e-11,25;CL:0000988,2.86e-10,177;CL:0000151,8.61e-08,36;CL:0000893,8.52e-07,2;CL:0002489,8.52e-07,2;CL:0000809,8.52e-07,2;CL:0000808,8.52e-07,2;CL:0000894,8.52e-07,2;CL:0000806,8.52e-07,2;CL:0000807,8.52e-07,2;CL:0000805,8.52e-07,2;CL:0002425,8.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.54e-15;18!CL:0000051;2.79e-09;53!CL:0002425;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.67e-09!4;UBERON:0005058!8.67e-09!4;UBERON:0009113!8.67e-09!4;UBERON:0003295!8.67e-09!4;UBERON:0005562!8.67e-09!4;UBERON:0004177!5.17e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.656804715599566,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.802177789880567,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0,0,1.90810750907073,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.205601498999509,0.167186495390678,0.651844533267181,0,0,0.445641827540694,0,0,0,0.768547918354051,0.390178042679635,0.164437904603676,0.276350017785848,0,0.296573126324121,0.535081656179426,1.04535523804977,0,0.383220493601921,0.68725489096526,0,1.91139248594458,0,0,0,0,0,0.710331756132051,1.64225599384209,0.604820229674197,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,1.58487181223807,3.31724984865235,3.17063897517315,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0.394061520403854,1.72502059887614,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0.169291777801603,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0.503865495708552,0,0.861593638227486,0,0.269605053441981,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0,0.345701962667338,0,0.135939465953663,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,1.33982065078089,0,0,0,0,0.387533459016037,0.558672428662721,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | |||
|short_description=p3@SKAP1 | |||
}} |
Revision as of 15:59, 20 January 2014
Short description: | p3@SKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SKAP1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -31bp_to_ENST00000336915, NM_001075099, NM_003726, uc002ini.1, uc002inj.1, uc010dbd.1, uc010dbe.1_5end |
EntrezGene: | SKAP1 |
HGNC: | 15605 |
UniProt: | Q86WV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.54e-07 | 2 |