FFCP PHASE1:Hg19::chr17:72462766..72462831,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19319 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGN4 | |||
|association_with_transcript=0bp_to_ENST00000310828,ENST00000392625_5end | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_1_at_CD300A_5end | |||
|id=chr17:72462766..72462831,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.14e-61!172;CL:0000566!3.14e-61!172;CL:0002032!1.81e-56!165;CL:0000837!1.81e-56!165;CL:0000988!1.66e-54!182;CL:0000738!2.96e-52!140;CL:0000763!8.54e-52!112;CL:0000049!8.54e-52!112;CL:0000766!6.32e-45!76;CL:0002031!9.71e-43!124;CL:0000557!2.28e-40!71;CL:0002087!1.83e-39!119;CL:0000839!4.19e-39!70;CL:0002009!1.72e-36!65;CL:0002194!3.23e-35!63;CL:0000576!3.23e-35!63;CL:0000040!3.23e-35!63;CL:0000559!3.23e-35!63;CL:0002057!4.45e-34!42;CL:0000860!2.62e-30!45;CL:0002393!9.03e-09!9;CL:0002397!9.03e-09!9;CL:0000094!2.07e-07!8;CL:0000134!4.13e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-26;33!CL:0002057;2.98e-26;33!CL:0000473;2.60e-25;39!CL:0000234;2.60e-25;39!CL:0000576;3.82e-25;48!CL:0000766;6.98e-23;69!CL:0000763;2.38e-17;100!CL:0002087;2.06e-12;104!CL:0000738;5.65e-12;136!CL:0000988;2.69e-10;177!CL:0000094;6.95e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.42e-62,168;CL:0002032,9.38e-57,161;CL:0000837,9.38e-57,161;CL:0000988,6.45e-56,177;CL:0000763,5.62e-55,108;CL:0000049,5.62e-55,108;CL:0000738,2.33e-54,136;CL:0000766,1.50e-53,72;CL:0000557,1.77e-48,67;CL:0002031,3.86e-47,120;CL:0000839,4.79e-47,66;CL:0002009,3.03e-44,61;CL:0002194,7.41e-43,59;CL:0000576,7.41e-43,59;CL:0000040,7.41e-43,59;CL:0000559,7.41e-43,59;CL:0002087,8.05e-43,115;CL:0000473,7.05e-41,48;CL:0000234,7.05e-41,48;CL:0000860,8.41e-37,42;CL:0002057,8.41e-37,42;CL:0002393,2.26e-09,9;CL:0002397,2.26e-09,9;CL:0000094,6.72e-08,8;CL:0000134,6.80e-08,354;CL:0002320,4.16e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-26;42!CL:0000049;1.52e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!1.63e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.27e-45!102;UBERON:0003061!9.27e-45!102;UBERON:0002193!1.15e-39!112;UBERON:0007023!8.01e-38!115;UBERON:0002371!1.00e-33!80;UBERON:0001474!3.19e-29!86;UBERON:0002405!6.67e-26!115;UBERON:0004765!3.67e-21!101;UBERON:0001434!3.67e-21!101;UBERON:0001049!8.25e-14!57;UBERON:0005068!8.25e-14!57;UBERON:0006241!8.25e-14!57;UBERON:0007135!8.25e-14!57;UBERON:0003080!6.58e-12!42;UBERON:0002780!1.58e-11!41;UBERON:0001890!1.58e-11!41;UBERON:0006240!1.58e-11!41;UBERON:0003081!2.06e-10!216;UBERON:0002616!3.17e-10!59;UBERON:0002020!1.91e-09!34;UBERON:0003528!1.91e-09!34;UBERON:0001893!3.63e-09!34;UBERON:0002791!5.26e-09!33;UBERON:0001869!2.84e-08!32;UBERON:0000955!4.56e-08!69;UBERON:0006238!4.56e-08!69;UBERON:0001017!1.02e-07!82;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0002619!2.18e-07!22;UBERON:0003075!2.94e-07!86;UBERON:0007284!2.94e-07!86;UBERON:0005743!3.59e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.68e-09;114!UBERON:0000178;3.48e-08;15!UBERON:0000179;3.48e-08;15!UBERON:0000463;3.48e-08;15!UBERON:0002780;5.05e-08;41!UBERON:0001890;5.05e-08;41!UBERON:0000073;3.48e-07;53!UBERON:0002616;3.48e-07;53!UBERON:0003528;4.38e-07;34!UBERON:0002020;4.38e-07;34!UBERON:0001893;4.79e-07;34!UBERON:0002791;6.66e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.35e-53,98;UBERON:0003061,4.35e-53,98;UBERON:0002193,2.07e-47,108;UBERON:0002371,8.05e-41,76;UBERON:0002405,1.32e-39,93;UBERON:0007023,6.78e-36,114;UBERON:0001474,1.12e-35,82;UBERON:0004765,5.92e-30,90;UBERON:0001434,3.35e-24,100;UBERON:0003081,1.46e-14,203;UBERON:0001049,5.55e-13,56;UBERON:0005068,5.55e-13,56;UBERON:0006241,5.55e-13,56;UBERON:0007135,5.55e-13,56;UBERON:0000073,1.30e-11,53;UBERON:0002616,1.30e-11,53;UBERON:0002780,1.14e-10,41;UBERON:0001890,1.14e-10,41;UBERON:0003080,1.14e-10,41;UBERON:0006240,1.14e-10,41;UBERON:0003528,1.78e-08,34;UBERON:0002020,1.78e-08,34;UBERON:0001893,3.33e-08,34;UBERON:0000178,3.47e-08,15;UBERON:0000179,3.47e-08,15;UBERON:0000463,3.47e-08,15;UBERON:0000955,1.05e-07,68;UBERON:0006238,1.05e-07,68;UBERON:0002791,1.16e-07,32;UBERON:0001017,1.39e-07,81;UBERON:0001869,2.71e-07,32;UBERON:0002204,3.57e-07,167;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,19.9438989002153,12.2329878280419,16.6866856385,61.7581914652779,10.747223146722,30.9632246632152,0,0,0,0,0,22.3136333894484,27.6997704265939,27.0735004084691,30.5985327709351,19.0328153103936,15.546895968911,17.5151385991247,75.170889449035,128.855696797884,162.288736934649,45.3236621966085,75.6548913960159,77.1168863528808,50.3461686563763,97.8533898941164,97.6671609439857,52.0565977912294,53.5752287374576,74.484567626888,61.5552450304317,104.250149322097,117.305658880334,52.0342617030534,77.6648245524147,90.1465347376648,72.8971373412643,117.28463068152,141.080392426322,23.5069483289153,38.0148100543064,33.0095791967655,62.3096689836723,82.915784028812,73.1926406656243,21.1889825921679,40.5105399586321,45.5705837914874,196.88992684273,230.888269762037,183.241656174321,78.1807272779606,107.376478381677,50.146383049489,189.818487331672,249.24259653046,171.156312077462,0,6.00752472388345,0.889509253863555,10.6682555641627,5.60554381850417,5.17277195959035,5.94940385506376,3.81621501814146,0.569212969109448,1.17447437874188,1.52909291250092,17.1822727152734,10.6496626966492,14.2227405778542,1.96709770113833,2.75107533924415,4.72883447698871,0.167186495390678,0,0.473447805734733,0,3.34231370655521,0,1.77227115666897,1.08321545506006,4.09892223122161,7.93362020115257,3.78207180588455,11.0540007114339,3.47763702882063,0.444859689486181,1.87278579662799,2.09071047609954,7.3651072753418,4.21542542962113,7.55980380061786,8.09663014462409,7.00843911513013,3.25541726928209,3.8018081777935,18.6713147656438,11.1348351704344,12.4930726552346,13.2595261144649,4.92676798152628,0.201606743224732,1.87208137048455,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0.263504357079378,2.94702919869853,0,0,3.24547393654683,4.17911369518241,7.17972986801872,25.5184968006716,28.5997455390064,27.1163975970582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.7504462872773,100.822868678565,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,4.13552934676983,5.29755719297581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3534304427132,6.55211942389866,26.7536092119711,0,0,0,0,0,0,17.243213326358,67.1809551520915,27.9892955980042,23.9239122672156,32.4443053905796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.0819878693,29.6331683944955,18.9750545534728,0,0,0,0,0,0,20.5115813508155,5.12279976525011,5.82194452120697,5.00537841491019,0,0,0,1.84267891867784,0,71.9046742989295,158.555573378133,84.1263492275152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7106427429032,29.7685597129691,23.3733351589543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85037839639715,4.44440266742331,0,0,0,7.00678879204511,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,7.90807926524945,0,0,0,0,136.503406883454,142.222520528482,132.72779461158,70.04014198459,78.9815564325493,142.015655151205,120.4270105041,127.693153383378,0,0,0,0.185803175125719,0,4.5530779742985,0,8.18275422874548,58.2176325202395,143.726362669516,18.8280725359242,4.7735520279288,44.7339970905057,1.25343916618419,17.5444133963047,42.4922362282024,0.642352300414798,0.80719882876419,13.2012333684001,20.9538260301016,4.91585222893533,5.5919026973104,7.8419096604597,5.08009048045305,0,1.23087398947712,8.92503738970744,0.99921590399346,0,0,14.9438342857332,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,7.95318118213038,17.4430076349036,0,0,0,3.98495976502139,6.63081397274754,0,0,14.5240070444062,0,0,0,6.65044081294933,3.94573622547734,50.2914493928574,0,3.87733098438087,4.45286871176886,1.99613798001194,0,0,7.24999575434793,0,0,0,0,0,0,7.97167247232455,16.4011156530555,0,2.43274371848694,2.36438095162838,1.97446857438575,0,0,1.84680620409113,0,0,0,0,6.06102203490647,1.00757352742049,8.52855641629816,0,43.9544717906069,10.9699710054103,0,0,0,0,23.8404868470568,0,0,0,0,3.98104772431402,5.39591143470369,14.664723478407,0,0,0,6.33570650018364,4.01288823649394,3.27970224015475,0,0,0,0,4.83962864194656,0.61214552326098,15.2279656904656,0,0,0,0,0,0,0,0,0,0,0,2.44617335538842,0,0,0,0,1.64881328030313,0,5.42353777873278,0,0,1.70939149080872,0,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,16.2113477951643,30.2560887351305,7.66479528401834,0,0,2.23425921017803,1.60412296808179,2.87149209830726,2.59582700648688,2.14613024068285,5.35611497860494,1.41085292222125,0,0,0,0,0,0,7.45125322178903,4.77137813885582,14.3013576417154,0,0,0,14.6233029508475,34.0472860005498,2.49073182297901,0,2.04894838977915,2.09818352539992,0,0,0,4.2881719582402,5.29673576292345,0,0,0,0,0,4.18671855821629,0,0,7.18105945022604,13.2506888912221,4.65418642901582,19.8348902614035,0,0,10.9991034944726,5.65935498358797,11.1844544943743,29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| |||
|short_description=p1@CD300A | |||
}} |
Revision as of 17:11, 20 January 2014
Short description: | p1@CD300A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD300A_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000310828, ENST00000392625_5end |
EntrezGene: | CD300A |
HGNC: | 19319 |
UniProt: | Q9UGN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.42e-62 | 168 |
hematopoietic oligopotent progenitor cell | 9.38e-57 | 161 |
hematopoietic multipotent progenitor cell | 9.38e-57 | 161 |
hematopoietic cell | 6.45e-56 | 177 |
myeloid cell | 5.62e-55 | 108 |
common myeloid progenitor | 5.62e-55 | 108 |
leukocyte | 2.33e-54 | 136 |
myeloid leukocyte | 1.50e-53 | 72 |
granulocyte monocyte progenitor cell | 1.77e-48 | 67 |
hematopoietic lineage restricted progenitor cell | 3.86e-47 | 120 |
myeloid lineage restricted progenitor cell | 4.79e-47 | 66 |
macrophage dendritic cell progenitor | 3.03e-44 | 61 |
monopoietic cell | 7.41e-43 | 59 |
monocyte | 7.41e-43 | 59 |
monoblast | 7.41e-43 | 59 |
promonocyte | 7.41e-43 | 59 |
nongranular leukocyte | 8.05e-43 | 115 |
defensive cell | 7.05e-41 | 48 |
phagocyte | 7.05e-41 | 48 |
classical monocyte | 8.41e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-37 | 42 |
intermediate monocyte | 2.26e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-09 | 9 |
granulocyte | 6.72e-08 | 8 |
mesenchymal cell | 6.80e-08 | 354 |
connective tissue cell | 4.16e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.35e-53 | 98 |
blood island | 4.35e-53 | 98 |
hemolymphoid system | 2.07e-47 | 108 |
bone marrow | 8.05e-41 | 76 |
immune system | 1.32e-39 | 93 |
adult organism | 6.78e-36 | 114 |
bone element | 1.12e-35 | 82 |
skeletal element | 5.92e-30 | 90 |
skeletal system | 3.35e-24 | 100 |
lateral plate mesoderm | 1.46e-14 | 203 |
neural tube | 5.55e-13 | 56 |
neural rod | 5.55e-13 | 56 |
future spinal cord | 5.55e-13 | 56 |
neural keel | 5.55e-13 | 56 |
regional part of nervous system | 1.30e-11 | 53 |
regional part of brain | 1.30e-11 | 53 |
regional part of forebrain | 1.14e-10 | 41 |
forebrain | 1.14e-10 | 41 |
anterior neural tube | 1.14e-10 | 41 |
future forebrain | 1.14e-10 | 41 |
brain grey matter | 1.78e-08 | 34 |
gray matter | 1.78e-08 | 34 |
telencephalon | 3.33e-08 | 34 |
blood | 3.47e-08 | 15 |
haemolymphatic fluid | 3.47e-08 | 15 |
organism substance | 3.47e-08 | 15 |
brain | 1.05e-07 | 68 |
future brain | 1.05e-07 | 68 |
regional part of telencephalon | 1.16e-07 | 32 |
central nervous system | 1.39e-07 | 81 |
cerebral hemisphere | 2.71e-07 | 32 |
musculoskeletal system | 3.57e-07 | 167 |
neural plate | 5.25e-07 | 82 |
presumptive neural plate | 5.25e-07 | 82 |