FFCP PHASE1:Hg19::chr18:22150956..22150983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1439 | |||
|description=CAGE_peak_at_chr18:22150956..22150983,+ | |||
|id=chr18:22150956..22150983,+ | |||
|ontology_enrichment_celltype=CL:0000153!8.37e-23!9;CL:0000447!8.37e-23!9;CL:0000214!4.26e-18!3;CL:0000135!7.09e-18!3;CL:0000386!7.09e-18!3;CL:0000388!7.09e-18!3;CL:0002582!4.10e-17!3;CL:0000499!1.39e-16!27;CL:0000327!8.92e-15!14;CL:0000667!2.56e-09!6;CL:0000058!2.56e-09!6;CL:0000138!2.56e-09!6;CL:0000151!5.97e-09!35;CL:0000136!4.02e-08!15;CL:0002570!3.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.71e-66;3!CL:0000153;6.62e-50;9!CL:0000447;6.62e-50;9!CL:0000327;2.01e-30;15!CL:0000499;5.86e-29;28!CL:0000135;9.46e-18;3!CL:0000388;9.46e-18;3!CL:0000138;1.57e-09;6!CL:0000151;1.94e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.71e-66,3;CL:0000153,6.62e-50,9;CL:0000447,6.62e-50,9;CL:0000327,2.01e-30,15;CL:0000499,5.86e-29,28;CL:0000135,9.46e-18,3;CL:0000388,9.46e-18,3;CL:0000151,2.78e-13,36;CL:0000058,1.57e-09,6;CL:0000138,1.57e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!4.26e-18!3;UBERON:0002018!4.26e-18!3;UBERON:0002217!4.26e-18!3;UBERON:0007616!4.26e-18!3;UBERON:0000043!7.09e-18!3;UBERON:0002135!1.10e-13!1;UBERON:0004905!3.04e-11!5;UBERON:0000982!3.04e-11!5;UBERON:0004770!3.04e-11!5;UBERON:0002133!1.75e-07!2;UBERON:0000341!1.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.71e-66;3!UBERON:0007616;1.71e-66;3!UBERON:0002217;1.71e-66;3!UBERON:0002018;1.71e-66;3!UBERON:0004905;8.65e-26;8!UBERON:0000982;8.65e-26;8!UBERON:0004770;8.65e-26;8!UBERON:0004457;4.59e-23;9!UBERON:0000042;4.59e-23;9!UBERON:0007846;9.46e-18;3!UBERON:0000043;9.46e-18;3!UBERON:0007845;9.46e-18;3!UBERON:0000486;1.33e-17;12!UBERON:0006914;5.06e-09;25!UBERON:0002204;7.33e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.71e-66,3;UBERON:0007616,1.71e-66,3;UBERON:0002217,1.71e-66,3;UBERON:0002018,1.71e-66,3;UBERON:0004905,8.65e-26,8;UBERON:0000982,8.65e-26,8;UBERON:0004770,8.65e-26,8;UBERON:0007846,9.46e-18,3;UBERON:0000043,9.46e-18,3;UBERON:0007845,9.46e-18,3;UBERON:0004457,1.33e-17,12;UBERON:0000042,1.33e-17,12;UBERON:0006914,5.06e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.28873595309722,5.26871828735843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:22150956..22150983,+ | |||
}} |
Revision as of 18:50, 20 January 2014
Short description: | p@chr18:22150956..22150983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:22150956..22150983, + |
Coexpression cluster: | C1439_Synoviocyte_Fibroblast_heart_mesenchymal_Chondrocyte_Hep2_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.71e-66 | 3 |
GAG secreting cell | 6.62e-50 | 9 |
carbohydrate secreting cell | 6.62e-50 | 9 |
extracellular matrix secreting cell | 2.01e-30 | 15 |
stromal cell | 5.86e-29 | 28 |
fibrocyte | 9.46e-18 | 3 |
tendon cell | 9.46e-18 | 3 |
secretory cell | 2.78e-13 | 36 |
chondroblast | 1.57e-09 | 6 |
chondrocyte | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.71e-66 | 3 |
layer of synovial tissue | 1.71e-66 | 3 |
synovial joint | 1.71e-66 | 3 |
synovial membrane of synovial joint | 1.71e-66 | 3 |
articulation | 8.65e-26 | 8 |
skeletal joint | 8.65e-26 | 8 |
articular system | 8.65e-26 | 8 |
dense regular connective tissue | 9.46e-18 | 3 |
tendon | 9.46e-18 | 3 |
regular connective tissue | 9.46e-18 | 3 |
cavity lining | 1.33e-17 | 12 |
serous membrane | 1.33e-17 | 12 |
squamous epithelium | 5.06e-09 | 25 |