FFCP PHASE1:Hg19::chr18:23806437..23806449,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11538 | |||
|TSSclassifier=strong | |||
|UniProt=Q92750,F5H0K4 | |||
|association_with_transcript=28bp_to_ENST00000269142,ENST00000400466,ENST00000418698,NM_005640,uc002kvs.3,uc002kvt.3,uc002kvu.3_5end | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_2_at_TAF4B_5end | |||
|id=chr18:23806437..23806449,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.31e-36!172;CL:0000566!3.31e-36!172;CL:0000988!7.10e-35!182;CL:0002032!1.55e-33!165;CL:0000837!1.55e-33!165;CL:0000738!2.03e-30!140;CL:0002087!2.55e-29!119;CL:0002031!2.65e-29!124;CL:0000860!2.32e-19!45;CL:0002057!1.26e-18!42;CL:0000763!6.28e-17!112;CL:0000049!6.28e-17!112;CL:0000542!2.27e-16!53;CL:0000051!2.27e-16!53;CL:0000838!4.41e-16!52;CL:0000557!2.21e-13!71;CL:0002009!4.17e-13!65;CL:0000945!1.35e-12!24;CL:0000826!1.35e-12!24;CL:0000839!1.62e-12!70;CL:0002194!4.11e-12!63;CL:0000576!4.11e-12!63;CL:0000040!4.11e-12!63;CL:0000559!4.11e-12!63;CL:0000766!3.90e-11!76;CL:0000236!1.08e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.40e-17;33!CL:0002057;6.40e-17;33!CL:0000945;3.27e-14;24!CL:0000576;1.23e-11;48!CL:0002087;2.13e-11;104!CL:0000542;5.24e-11;53!CL:0000473;1.70e-10;39!CL:0000234;1.70e-10;39!CL:0000738;4.08e-08;136!CL:0000236;4.66e-08;13!CL:0000988;4.68e-08;177!CL:0000763;8.18e-07;100!CL:0000766;9.84e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.79e-40,168;CL:0000988,1.81e-38,177;CL:0002032,3.66e-37,161;CL:0000837,3.66e-37,161;CL:0000738,1.02e-34,136;CL:0002031,1.19e-32,120;CL:0002087,4.35e-32,115;CL:0000860,1.36e-19,42;CL:0002057,1.36e-19,42;CL:0000763,9.20e-19,108;CL:0000049,9.20e-19,108;CL:0000542,7.05e-18,53;CL:0000051,7.05e-18,53;CL:0000838,1.48e-17,52;CL:0000473,3.85e-15,48;CL:0000234,3.85e-15,48;CL:0000557,5.37e-15,67;CL:0002009,3.33e-14,61;CL:0000839,5.29e-14,66;CL:0000945,6.73e-14,24;CL:0000826,6.73e-14,24;CL:0002194,4.40e-13,59;CL:0000576,4.40e-13,59;CL:0000040,4.40e-13,59;CL:0000559,4.40e-13,59;CL:0000766,4.76e-13,72;CL:0000236,2.04e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-14;42!CL:0000051;5.24e-11;53 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.03e-09,51;DOID:0060083,6.03e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.15e-15!102;UBERON:0003061!4.15e-15!102;UBERON:0002193!7.22e-13!112;UBERON:0002371!2.30e-11!80;UBERON:0001474!1.13e-10!86;UBERON:0004765!1.65e-08!101;UBERON:0001434!1.65e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-16,98;UBERON:0003061,1.55e-16,98;UBERON:0002193,3.64e-14,108;UBERON:0002371,1.41e-12,76;UBERON:0002405,1.49e-12,93;UBERON:0001474,6.51e-12,82;UBERON:0004765,1.67e-10,90;UBERON:0001434,3.36e-09,100 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,1.04474251279935,0.982935746006035,0.697801167972428,0.655324116390517,0.263766978228454,0.495065411840187,0,0.672325146451775,0.602694528023977,1.46062018077475,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,5.42535180810454,5.66494067204626,4.64393609750708,4.32700704533794,1.91914699048606,5.57338043937874,0.919421224478927,2.409647350226,1.10926203050036,51.5931555864809,58.8580622497925,4.40400659002271,12.1878989877013,7.62068900386538,7.16135873362311,0.895661896959697,3.88672399222775,1.03030227053675,3.34415949192999,4.1566353805769,5.09426528494414,4.18372266430232,8.63452564845834,15.7950249156503,11.7953880852082,16.1381245113333,15.371344942758,7.23965929546899,12.9096936716765,18.9597081232078,4.51781614902251,4.09359225086769,6.29225756446237,6.12167784741805,6.73950956859797,15.344091019177,9.89553900560148,15.159237979244,11.9342930149154,8.70627715885752,17.5889419654253,23.0444232128363,16.0799145764316,14.6015217157656,19.5469960234605,7.87019353423379,21.3601028872788,22.1523671208619,1.90129757680748,5.31510749912609,3.77385561915077,0.898629049171961,1.95229960693958,2.4108838004562,1.99508920618874,0.99458338599545,1.0959849225878,5.27988733383968,3.27683166757279,7.11607403090844,15.3622880123943,4.80475184443215,5.17277195959035,7.93253847341835,7.63243003628291,6.83055562931338,18.2043528704991,11.8504700718821,3.96513985737078,17.3757654524276,3.95076127162616,11.80258620683,4.71612915298998,6.99045096598331,0.334372990781356,1.30368906653436,3.31413464014313,0,0.445641827540694,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.390178042679635,0.493313713811028,1.93445012450094,0.869409257205157,5.6348894001583,2.94294910898684,2.09071047609954,1.0197840842781,4.98186641682498,3.09264700934367,2.27717722817553,1.27426165729639,0.651083453856419,3.8018081777935,2.86092726247768,2.55973222308837,0,1.65744076430812,0.821127996921047,8.46748321543876,5.88368430723716,8.39981542520234,0,0.670700859703636,0.255725123687061,1.44575660953827,0,0.434539556882471,0,0,0.472674085820339,0,0.351339142772504,3.6019245761871,1.45718115317017,1.11235332835329,1.29818957461873,1.0447784237956,0.398873881556595,4.5313218618015,3.43196946468077,1.85728750664782,1.39133685156694,0,1.04142150482278,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,1.33888245105868,0.805658634218294,0,0,0.367663080345869,0,0.892997282840798,0,0.675668882899933,0,0.949265659568129,0.366403487860815,1.31780417436063,7.75560528296651,0,0,0.25326102332916,1.19168262731897,0.860509862246441,0.709336764396714,0,1.06748995729705,0.24666754841716,0.622422070799533,0.538842688278752,0.653847612453835,0,0,0.234321431833797,0.936480230490962,1.71141546463335,0.298897361103602,0.822041490506354,0.323745888736263,0.280901613404497,0.408308342509787,0.368502951935304,1.85986406116378,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0.300476117813194,0.794025282120147,0.358779271377724,0,0.423863802319124,0,0.206105058476878,0.772921620136887,0.18611685633159,0.843881661206331,0.0974370051611986,0.504867548488229,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,2.31913023795956,1.90922284413584,1.72082757233402,1.70763188581434,0.795178609928912,1.97529702878181,1.45125477021519,1.26160425437814,2.55484151353081,1.56449532329816,0,0,0,0,2.24782920075703,1.68584690078102,2.89213235860178,1.43382164552112,1.96091499683166,1.89816495288877,2.29213223872279,1.96221465125346,1.92373578473195,0,0,0,1.47008711385542,0,0,0,5.73902029239046,0.491953754172454,0.514703430895577,2.30475599358114,4.49607013030478,3.41798506199545,1.48141512253647,0.325808305310325,0,0,0.34779121492523,0.70445216541493,0.577465791044295,0,0,4.74122638775565,4.29243081047436,0.246217006087397,0,0.743155811443641,2.81201501960331,1.34385702559088,2.1266264586358,2.68675568108545,3.77824120068151,1.53353071666084,0,0,6.84182781284548,5.04419836959365,8.71072790642022,4.06386523469882,6.49380323449072,14.0660936652056,3.4214489204541,2.57068731758309,1.50171528921959,15.7204537946818,0.672786506072164,0.87192013766656,0.2933531432838,0.517086863031111,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,0.65147236858747,0.355391948742546,1.58390374586686,1.80863626235752,0,0.799783929456456,0,1.50677127429638,0,0.718874566474748,1.14861935834114,0,0.868687840005475,0.61642896765115,0.179060963239896,4.48340575974109,8.07826116827902,4.31255149719035,5.26206448746968,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,0.623912584592421,0.178428988797162,0,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0.737476674166813,0.173767228936166,0.587403472388222,0.343143423810856,3.92859249633486,6.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| |||
|short_description=p2@TAF4B | |||
}} |
Revision as of 18:51, 20 January 2014
Short description: | p2@TAF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TAF4B_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 28bp_to_ENST00000269142, ENST00000400466, ENST00000418698, NM_005640, uc002kvs.3, uc002kvt.3, uc002kvu.3_5end |
EntrezGene: | TAF4B |
HGNC: | 11538 |
UniProt: | Q92750F5H0K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.79e-40 | 168 |
hematopoietic cell | 1.81e-38 | 177 |
hematopoietic oligopotent progenitor cell | 3.66e-37 | 161 |
hematopoietic multipotent progenitor cell | 3.66e-37 | 161 |
leukocyte | 1.02e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 1.19e-32 | 120 |
nongranular leukocyte | 4.35e-32 | 115 |
classical monocyte | 1.36e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-19 | 42 |
myeloid cell | 9.20e-19 | 108 |
common myeloid progenitor | 9.20e-19 | 108 |
lymphocyte | 7.05e-18 | 53 |
common lymphoid progenitor | 7.05e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.48e-17 | 52 |
defensive cell | 3.85e-15 | 48 |
phagocyte | 3.85e-15 | 48 |
granulocyte monocyte progenitor cell | 5.37e-15 | 67 |
macrophage dendritic cell progenitor | 3.33e-14 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-14 | 66 |
lymphocyte of B lineage | 6.73e-14 | 24 |
pro-B cell | 6.73e-14 | 24 |
monopoietic cell | 4.40e-13 | 59 |
monocyte | 4.40e-13 | 59 |
monoblast | 4.40e-13 | 59 |
promonocyte | 4.40e-13 | 59 |
myeloid leukocyte | 4.76e-13 | 72 |
B cell | 2.04e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-16 | 98 |
blood island | 1.55e-16 | 98 |
hemolymphoid system | 3.64e-14 | 108 |
bone marrow | 1.41e-12 | 76 |
immune system | 1.49e-12 | 93 |
bone element | 6.51e-12 | 82 |
skeletal element | 1.67e-10 | 90 |
skeletal system | 3.36e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.03e-09 | 51 |
immune system cancer | 6.03e-09 | 51 |