FFCP PHASE1:Hg19::chr2:56149661..56149678,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3218 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-82bp_to_DQ892514,DQ895728_5end | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_10_at_EFEMP1_5end | |||
|id=chr2:56149661..56149678,- | |||
|ontology_enrichment_celltype=CL:0002139!1.92e-23!24;CL:0000213!1.47e-21!57;CL:0000215!1.47e-21!57;CL:0000115!6.75e-18!35;CL:0002078!3.69e-16!44;CL:0000222!1.49e-15!119;CL:0000071!3.00e-14!18;CL:0002546!3.00e-14!18;CL:0005020!1.07e-11!6;CL:0002138!1.07e-11!6;CL:0005022!1.07e-11!6;CL:1000306!3.97e-08!4;CL:0002547!3.97e-08!4;CL:0000076!1.77e-07!62;CL:0000057!3.29e-07!75;CL:0000153!3.87e-07!9;CL:0000447!3.87e-07!9;CL:0002144!7.54e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.86e-36;24!CL:0002138;5.51e-27;6!CL:0002078;5.89e-27;45!CL:0000115;2.18e-26;36!CL:0002144;2.95e-20;3!CL:0000213;4.64e-20;58!CL:0000215;4.64e-20;58!CL:0000135;3.42e-19;3!CL:0000388;3.42e-19;3!CL:0000153;2.20e-17;9!CL:0000447;2.20e-17;9!CL:0000071;2.23e-16;18!CL:1000306;1.10e-14;4!CL:0002547;1.10e-14;4!CL:0000499;3.71e-13;28!CL:0000327;2.35e-10;15!CL:0000138;7.21e-10;6!CL:0000214;1.29e-09;3!CL:1000413;9.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.62e-36,24;CL:0002078,7.53e-33,45;CL:0000213,8.08e-32,58;CL:0000215,8.08e-32,58;CL:0000115,1.10e-31,36;CL:0005020,5.67e-27,6;CL:0002138,5.67e-27,6;CL:0005022,5.67e-27,6;CL:0002144,2.59e-20,3;CL:0000135,3.12e-19,3;CL:0000388,3.12e-19,3;CL:0000153,2.57e-17,9;CL:0000447,2.57e-17,9;CL:0000071,2.13e-16,18;CL:0002546,2.13e-16,18;CL:0000222,4.29e-15,121;CL:1000306,9.81e-15,4;CL:0002547,9.81e-15,4;CL:0000499,3.91e-13,28;CL:0000327,2.58e-10,15;CL:0000058,8.54e-10,6;CL:0000138,8.54e-10,6;CL:0000214,1.23e-09,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.51e-27;6!CL:0002546;2.23e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.47e-21!79;UBERON:0007798!6.47e-21!79;UBERON:0000055!5.13e-20!69;UBERON:0004535!7.73e-18!110;UBERON:0001009!5.14e-17!113;UBERON:0004872!5.47e-15!84;UBERON:0001981!8.59e-15!60;UBERON:0007500!8.59e-15!60;UBERON:0004537!8.59e-15!60;UBERON:0006965!8.59e-15!60;UBERON:0001986!3.00e-14!18;UBERON:0004638!3.00e-14!18;UBERON:0004852!3.00e-14!18;UBERON:0006914!6.30e-13!25;UBERON:0003914!1.03e-11!118;UBERON:0001637!5.52e-11!42;UBERON:0003509!5.52e-11!42;UBERON:0004572!5.52e-11!42;UBERON:0000487!5.55e-11!22;UBERON:0004573!2.38e-09!33;UBERON:0004571!2.38e-09!33;UBERON:0001473!1.76e-08!8;UBERON:0004536!1.76e-08!8;UBERON:0006558!1.76e-08!8;UBERON:0004111!2.54e-08!241;UBERON:0000477!2.56e-08!286;UBERON:0000415!3.97e-08!4;UBERON:0007240!3.97e-08!4;UBERON:0005742!3.97e-08!4;UBERON:0005734!3.97e-08!4;UBERON:0004664!3.97e-08!4;UBERON:0004663!3.97e-08!4;UBERON:0000025!7.95e-08!194;UBERON:0003688!2.49e-07!6;UBERON:0002358!2.49e-07!6;UBERON:0003684!2.49e-07!6;UBERON:0001178!2.49e-07!6;UBERON:0001915!7.54e-07!3;UBERON:0001982!7.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.95e-20;3!UBERON:0001915;2.95e-20;3!UBERON:0001982;2.95e-20;3!UBERON:0001473;3.32e-20;8!UBERON:0004536;3.32e-20;8!UBERON:0006558;3.32e-20;8!UBERON:0007846;3.42e-19;3!UBERON:0000043;3.42e-19;3!UBERON:0007845;3.42e-19;3!UBERON:0006914;4.12e-19;25!UBERON:0004638;2.23e-16;18!UBERON:0001986;2.23e-16;18!UBERON:0004852;2.23e-16;18!UBERON:0002465;3.95e-16;10!UBERON:0004797;1.10e-14;4!UBERON:0000415;1.10e-14;4!UBERON:0007240;1.10e-14;4!UBERON:0005742;1.10e-14;4!UBERON:0005734;1.10e-14;4!UBERON:0004664;1.10e-14;4!UBERON:0004663;1.10e-14;4!UBERON:0000487;3.01e-13;22!UBERON:0000055;4.38e-12;65!UBERON:0004457;1.60e-11;9!UBERON:0000042;1.60e-11;9!UBERON:0006915;1.29e-09;3!UBERON:0007616;1.29e-09;3!UBERON:0002217;1.29e-09;3!UBERON:0002018;1.29e-09;3!UBERON:0000490;7.70e-08;33!UBERON:0002049;1.88e-07;75!UBERON:0007798;1.88e-07;75!UBERON:0000947;3.39e-07;21!UBERON:0010191;3.39e-07;21!UBERON:0007500;5.77e-07;56!UBERON:0001981;5.77e-07;56!UBERON:0004537;5.77e-07;56!UBERON:0003915;9.93e-07;9!UBERON:0004700;9.93e-07;9!UBERON:0001917;9.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.59e-20,3;UBERON:0001915,2.59e-20,3;UBERON:0001982,2.59e-20,3;UBERON:0001473,3.39e-20,8;UBERON:0004536,3.39e-20,8;UBERON:0006558,3.39e-20,8;UBERON:0007846,3.12e-19,3;UBERON:0000043,3.12e-19,3;UBERON:0007845,3.12e-19,3;UBERON:0006914,3.87e-19,25;UBERON:0000055,5.85e-18,68;UBERON:0004638,2.13e-16,18;UBERON:0001986,2.13e-16,18;UBERON:0004852,2.13e-16,18;UBERON:0002465,4.02e-16,10;UBERON:0002049,2.88e-15,78;UBERON:0007798,2.88e-15,78;UBERON:0000415,9.81e-15,4;UBERON:0007240,9.81e-15,4;UBERON:0005742,9.81e-15,4;UBERON:0005734,9.81e-15,4;UBERON:0004664,9.81e-15,4;UBERON:0004663,9.81e-15,4;UBERON:0004535,2.45e-13,109;UBERON:0000487,2.90e-13,22;UBERON:0001009,6.91e-13,112;UBERON:0006915,1.23e-09,3;UBERON:0007616,1.23e-09,3;UBERON:0002217,1.23e-09,3;UBERON:0002018,1.23e-09,3;UBERON:0007500,6.11e-09,59;UBERON:0001981,6.11e-09,59;UBERON:0004537,6.11e-09,59;UBERON:0006965,6.11e-09,59;UBERON:0004872,1.17e-08,83;UBERON:0004797,1.24e-08,7;UBERON:0004457,1.37e-08,12;UBERON:0000042,1.37e-08,12;UBERON:0003914,9.83e-08,117;UBERON:0000947,3.65e-07,21;UBERON:0010191,3.65e-07,21 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.767175371061182,1.44575660953827,2.50668955317945,1.01392563272577,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,2.51699661725944,0.550236083880135,0.417989933073621,1.29208379584664,0.71153252537342,6.02497102976406,2.81980521976403,8.36299316290364,3.41686880567437,1.10298924103761,0,1.87529429396568,0,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.886413581652058,1.85372853138506,4.87622255272983,1.06400514659507,0,0,0,1.55605517699883,0.404132016209064,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.226864366320042,0,0.427114777637135,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,3.89789408954899,4.1668696131895,6.08813287150714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0.384417447767103,2.04682899626681,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,1.51141141271498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,2.53329162357197,4.28083360847872,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0.2506898940227,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0.179088841081487,5.86722749605847,0.438568099157414,0.176689145945881,0,1.8583668471838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,1.84870251452567,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@EFEMP1 | |||
}} |
Revision as of 03:17, 21 January 2014
Short description: | p10@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EFEMP1_5end |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | -82bp_to_DQ892514, DQ895728_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.62e-36 | 24 |
meso-epithelial cell | 7.53e-33 | 45 |
lining cell | 8.08e-32 | 58 |
barrier cell | 8.08e-32 | 58 |
endothelial cell | 1.10e-31 | 36 |
lymphangioblast | 5.67e-27 | 6 |
endothelial cell of lymphatic vessel | 5.67e-27 | 6 |
vascular lymphangioblast | 5.67e-27 | 6 |
capillary endothelial cell | 2.59e-20 | 3 |
fibrocyte | 3.12e-19 | 3 |
tendon cell | 3.12e-19 | 3 |
GAG secreting cell | 2.57e-17 | 9 |
carbohydrate secreting cell | 2.57e-17 | 9 |
blood vessel endothelial cell | 2.13e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.13e-16 | 18 |
mesodermal cell | 4.29e-15 | 121 |
fibroblast of tunica adventitia of artery | 9.81e-15 | 4 |
fibroblast of the aortic adventitia | 9.81e-15 | 4 |
stromal cell | 3.91e-13 | 28 |
extracellular matrix secreting cell | 2.58e-10 | 15 |
chondroblast | 8.54e-10 | 6 |
chondrocyte | 8.54e-10 | 6 |
synovial cell | 1.23e-09 | 3 |