FFCP PHASE1:Hg19::chr2:182521855..182521867,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21699 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000476070_5end | |||
|coexpression_cluster_id=C2673 | |||
|description=CAGE_peak_4_at_CERKL_5end | |||
|id=chr2:182521855..182521867,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.24e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.54e-66;3!UBERON:0003056;1.30e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.77e-18!94;UBERON:0001016!1.77e-18!94;UBERON:0000955!5.80e-17!69;UBERON:0006238!5.80e-17!69;UBERON:0001049!1.41e-16!57;UBERON:0005068!1.41e-16!57;UBERON:0006241!1.41e-16!57;UBERON:0007135!1.41e-16!57;UBERON:0002616!7.88e-16!59;UBERON:0007023!2.43e-15!115;UBERON:0005743!4.21e-15!86;UBERON:0001017!1.17e-14!82;UBERON:0003075!5.52e-14!86;UBERON:0007284!5.52e-14!86;UBERON:0002346!4.51e-13!90;UBERON:0004733!9.51e-11!12;UBERON:0002028!9.51e-11!12;UBERON:0007277!9.51e-11!12;UBERON:0002780!2.03e-10!41;UBERON:0001890!2.03e-10!41;UBERON:0006240!2.03e-10!41;UBERON:0003080!4.28e-10!42;UBERON:0004732!7.86e-10!13;UBERON:0001893!1.66e-09!34;UBERON:0000153!1.80e-09!129;UBERON:0007811!1.80e-09!129;UBERON:0000033!2.01e-09!123;UBERON:0002619!2.17e-09!22;UBERON:0003056!2.68e-09!61;UBERON:0001869!9.81e-09!32;UBERON:0001950!1.69e-08!20;UBERON:0003076!2.30e-08!15;UBERON:0003057!2.30e-08!15;UBERON:0002791!3.19e-08!33;UBERON:0000956!4.45e-08!25;UBERON:0000203!4.45e-08!25;UBERON:0002020!5.69e-08!34;UBERON:0003528!5.69e-08!34;UBERON:0004121!1.06e-07!169;UBERON:0002680!1.25e-07!9;UBERON:0001895!1.25e-07!9;UBERON:0010092!1.25e-07!9;UBERON:0000924!2.33e-07!173;UBERON:0006601!2.33e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.39e-34;6!UBERON:0002680;8.68e-23;9!UBERON:0001895;8.68e-23;9!UBERON:0004733;2.75e-17;12!UBERON:0002028;2.75e-17;12!UBERON:0004732;5.15e-16;13!UBERON:0001905;1.85e-12;2!UBERON:0002757;1.85e-12;2!UBERON:0010134;1.85e-12;2!UBERON:0005408;1.85e-12;2!UBERON:0001899;1.85e-12;2!UBERON:0006955;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0003296;7.27e-07;4!UBERON:0010133;7.27e-07;4!UBERON:0002784;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.40e-34,6;UBERON:0006215,8.40e-34,6;UBERON:0002680,8.06e-23,9;UBERON:0001895,8.06e-23,9;UBERON:0010092,8.06e-23,9;UBERON:0004733,2.60e-17,12;UBERON:0002028,2.60e-17,12;UBERON:0007277,2.60e-17,12;UBERON:0004732,4.90e-16,13;UBERON:0003076,5.39e-14,15;UBERON:0003057,5.39e-14,15;UBERON:0001905,2.07e-12,2;UBERON:0002757,2.07e-12,2;UBERON:0010134,2.07e-12,2;UBERON:0005408,2.07e-12,2;UBERON:0001899,2.07e-12,2;UBERON:0006955,3.24e-12,2;UBERON:0004801,3.24e-12,2;UBERON:0000073,5.92e-07,53;UBERON:0002616,5.92e-07,53;UBERON:0003296,7.70e-07,4;UBERON:0010133,7.70e-07,4;UBERON:0002784,7.70e-07,4;UBERON:0003075,8.29e-07,82;UBERON:0007284,8.29e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,1.25966373927138,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0.347249989866585,0,0,1.52581736317083,3.75969483766164,2.06883333267483,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0.124252535565433,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.709251365692784,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.665574309221114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0.184105950251841,0,0,1.66262682694747,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.19024743058172,0,0,0,0,0,0,2.01770233331294,0,0.227662191351298,0,0,0,0.0679697329768317,0.263091094251396,0,0,0,0,0,0,0,0,1.1436247068265,0.94808167039636,0.697448552208751,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0.782988022584546,0,0.243835849964539,0,0,0,0,0,1.39265542612958,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p4@CERKL | |||
}} |
Revision as of 07:21, 21 January 2014
Short description: | p4@CERKL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CERKL_5end |
Coexpression cluster: | C2673_cerebellum_small_pineal_retinoblastoma_retina_eye_neuroblastoma |
Association with transcript: | -12bp_to_ENST00000476070_5end |
EntrezGene: | CERKL |
HGNC: | 21699 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.40e-34 | 6 |
rhombic lip | 8.40e-34 | 6 |
regional part of metencephalon | 8.06e-23 | 9 |
metencephalon | 8.06e-23 | 9 |
future metencephalon | 8.06e-23 | 9 |
segmental subdivision of hindbrain | 2.60e-17 | 12 |
hindbrain | 2.60e-17 | 12 |
presumptive hindbrain | 2.60e-17 | 12 |
segmental subdivision of nervous system | 4.90e-16 | 13 |
posterior neural tube | 5.39e-14 | 15 |
chordal neural plate | 5.39e-14 | 15 |
pineal body | 2.07e-12 | 2 |
regional part of epithalamus | 2.07e-12 | 2 |
secretory circumventricular organ | 2.07e-12 | 2 |
circumventricular organ | 2.07e-12 | 2 |
epithalamus | 2.07e-12 | 2 |
uterine epithelium | 3.24e-12 | 2 |
cervix epithelium | 3.24e-12 | 2 |
regional part of nervous system | 5.92e-07 | 53 |
regional part of brain | 5.92e-07 | 53 |
gland of diencephalon | 7.70e-07 | 4 |
neuroendocrine gland | 7.70e-07 | 4 |
regional part of diencephalon | 7.70e-07 | 4 |
neural plate | 8.29e-07 | 82 |
presumptive neural plate | 8.29e-07 | 82 |