FFCP PHASE1:Hg19::chr2:216236789..216236803,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=358bp_to_ENST00000485567_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_64_at_FN1_5end | |||
|id=chr2:216236789..216236803,- | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-31!180;CL:0000057!6.11e-22!75;CL:0000680!7.11e-19!57;CL:0000056!7.11e-19!57;CL:0000355!7.11e-19!57;CL:0000183!5.98e-18!59;CL:0000187!3.21e-17!54;CL:0000048!2.49e-15!430;CL:0002371!1.11e-14!591;CL:0000723!2.03e-14!436;CL:0000393!5.55e-14!60;CL:0000211!5.55e-14!60;CL:0000034!2.93e-13!444;CL:0000192!1.20e-12!42;CL:0000514!1.20e-12!42;CL:0000144!2.50e-12!625;CL:0000359!4.76e-12!32;CL:0002620!2.51e-11!23;CL:0002494!1.83e-09!16;CL:0000548!1.58e-08!679;CL:0000004!1.58e-08!679;CL:0000255!1.58e-08!679;CL:0000012!3.28e-08!682;CL:0002570!3.09e-07!8;CL:0002334!4.00e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.26e-11;12!CL:1000306;9.89e-10;4!CL:0002547;9.89e-10;4!CL:0002620;3.80e-09;23!CL:0002580;2.16e-08;3!CL:0002541;3.73e-08;3!CL:0000723;5.06e-08;61!CL:0000134;5.95e-08;55!CL:0002559;7.57e-08;5!CL:0002579;1.08e-07;3!CL:0000057;1.44e-07;73!CL:0000034;1.82e-07;69!CL:0000048;5.99e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-19,76;CL:0002334,9.93e-12,12;CL:0000048,2.04e-11,427;CL:0000723,5.20e-11,433;CL:0000034,1.73e-10,441;CL:1000306,9.12e-10,4;CL:0002547,9.12e-10,4;CL:0002620,3.91e-09,23;CL:0002580,1.79e-08,3;CL:0002320,2.99e-08,361;CL:0000134,3.71e-08,354;CL:0002541,5.46e-08,3;CL:0002559,5.57e-08,5;CL:0002579,9.49e-08,3;CL:0000219,3.06e-07,386;CL:0002570,5.45e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.66e-23!83;UBERON:0002329!6.66e-23!83;UBERON:0003077!6.66e-23!83;UBERON:0003059!6.66e-23!83;UBERON:0007282!6.66e-23!83;UBERON:0009618!6.66e-23!83;UBERON:0007285!6.66e-23!83;UBERON:0004290!5.32e-21!70;UBERON:0000486!1.01e-17!82;UBERON:0001134!1.01e-17!61;UBERON:0002036!1.01e-17!61;UBERON:0003082!1.01e-17!61;UBERON:0002385!1.26e-16!63;UBERON:0001015!1.26e-16!63;UBERON:0000383!1.26e-16!63;UBERON:0005256!1.91e-16!143;UBERON:0002100!5.54e-12!216;UBERON:0004573!7.79e-12!33;UBERON:0004571!7.79e-12!33;UBERON:0001637!1.53e-11!42;UBERON:0003509!1.53e-11!42;UBERON:0004572!1.53e-11!42;UBERON:0004872!3.37e-10!84;UBERON:0000490!1.10e-08!138;UBERON:0004923!1.72e-08!57;UBERON:0002049!2.04e-08!79;UBERON:0007798!2.04e-08!79;UBERON:0004535!2.26e-08!110;UBERON:0001009!3.31e-08!113;UBERON:0003914!4.17e-08!118;UBERON:0000475!1.04e-07!365;UBERON:0002097!1.13e-07!40;UBERON:0000948!1.37e-07!24;UBERON:0005498!1.37e-07!24;UBERON:0004140!1.37e-07!24;UBERON:0009881!1.37e-07!24;UBERON:0004141!1.37e-07!24;UBERON:0003084!1.37e-07!24;UBERON:0007005!1.37e-07!24;UBERON:0004139!1.37e-07!24;UBERON:0004291!1.37e-07!24;UBERON:0002199!1.71e-07!45;UBERON:0002416!1.71e-07!45;UBERON:0001981!2.32e-07!60;UBERON:0007500!2.32e-07!60;UBERON:0004537!2.32e-07!60;UBERON:0006965!2.32e-07!60;UBERON:0003102!4.19e-07!95;UBERON:0007100!6.34e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.89e-10;4!UBERON:0000415;9.89e-10;4!UBERON:0007240;9.89e-10;4!UBERON:0005742;9.89e-10;4!UBERON:0005734;9.89e-10;4!UBERON:0004664;9.89e-10;4!UBERON:0004663;9.89e-10;4!UBERON:0003688;1.40e-09;6!UBERON:0002358;1.40e-09;6!UBERON:0003684;1.40e-09;6!UBERON:0001178;1.40e-09;6!UBERON:0004457;1.28e-08;9!UBERON:0000042;1.28e-08;9!UBERON:0003124;3.73e-08;3!UBERON:0000920;3.73e-08;3!UBERON:0005631;5.42e-08;10!UBERON:0000158;5.42e-08;10!UBERON:0002097;6.16e-08;41!UBERON:0002073;7.57e-08;5!UBERON:0002199;1.44e-07;46!UBERON:0002416;1.44e-07;46!UBERON:0002384;2.66e-07;198!UBERON:0001013;4.25e-07;14!UBERON:0000947;4.31e-07;21!UBERON:0010191;4.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.58e-10,41;UBERON:0000415,9.12e-10,4;UBERON:0007240,9.12e-10,4;UBERON:0005742,9.12e-10,4;UBERON:0005734,9.12e-10,4;UBERON:0004664,9.12e-10,4;UBERON:0004663,9.12e-10,4;UBERON:0002199,9.27e-10,46;UBERON:0002416,9.27e-10,46;UBERON:0004923,1.38e-09,66;UBERON:0003688,1.94e-09,6;UBERON:0002358,1.94e-09,6;UBERON:0003684,1.94e-09,6;UBERON:0001178,1.94e-09,6;UBERON:0002384,2.61e-09,371;UBERON:0001637,3.33e-08,42;UBERON:0003509,3.33e-08,42;UBERON:0004572,3.33e-08,42;UBERON:0000920,5.46e-08,3;UBERON:0002073,5.57e-08,5;UBERON:0005086,5.57e-08,5;UBERON:0001013,2.30e-07,14;UBERON:0005631,2.52e-07,14;UBERON:0000158,2.52e-07,14;UBERON:0000947,3.67e-07,21;UBERON:0010191,3.67e-07,21 | |||
|phase1_expression=2.72517568905835,1.71280419112787,1.12763523276777,2.00146596706261,0,6.10636966870258,0,0,0,0,0,0.436882744260345,1.31883489114227,0.618831764800233,0.994192127183747,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0.50133791063589,0.289693037921647,14.3151470469198,21.411934293316,0.0945348171640679,0.443458794925128,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,1.77282716330412,3.83986624358335,5.16305917347865,1.06400514659507,0.560677600142307,1.06748995729705,2.4666754841716,0.311211035399766,0.808264032418128,0.980771418680752,0.605429710579726,2.88087962239999,0,1.24864030732128,0.570471821544449,0.896692083310806,0.23486899728753,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.841680569770331,0,0.277064115484183,0.438977620880838,0,0.45071417671979,1.02088964844019,1.61450672119976,0.640672166455702,3.60284231971255,1.20036438433761,0.309157587715317,2.06112432036503,1.67505170698431,1.35021065793013,1.16924406193438,1.7670364197088,0.368199594569197,1.13152239773168,1.06502877754984,0.503760491138201,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0.462985512576611,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0.87192013766656,0.07333828582095,0.517086863031111,3.57656445851882,0.845302752556,0.531876233169741,0,0.771622122786426,0,1.0656887160644,0.142977993658148,1.08524321078289,0.823240336780769,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,1.01346914667305,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0,0.623912584592421,1.60586089917446,0,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.783204629850962,0.343143423810856,0,0,0,0,1.66435439510497,0,2.97729369382532,4.29693525206575,4.49056151092918,2.30650468660262,1.53512174720011,2.2519548960105,2.96836132889982,0.771048469013278,1.24293207719189,0,0,0.232420756919918,0.604297247958111,1.00253235151642,0,0.229628896329213,0.910455840033585,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.924291702687866,1.07452572308291,0.413509717453592,0.966782203814463,1.30515024522806,0.681813019328807,0.178064071293475,0.661139661443912,0,1.14851441245126,0.2023155617111,0,5.03699754929024,0,0.308033580176089,1.59691809095107,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,0.949138274156178,0.38126038784765,0.511795582622668,0.855877976067841,0.636406495851874,0.78494864019923,0.359744915166629,0.274537029736055,0.589062011728432,0.404364963146632,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.272999822815972,0.282810863907425,3.39024349860728,0.551365343546124,0.66343897524122,0.438450885253763,0,0.655894752046633,1.01455188481352,0,0,0,0.392996164052485,1.78335525740625,0,1.05553817648832,0.987884678879706,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0.296964680832639,1.84296421259539,0,0,1.8922479853894,0,0,0.398495976502139,0,0,0,0,7.15391051622157,0,0,0,0.295930216910801,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,25.8390939382855,1.09917112082235,52.2374080498262,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0,0.429226048136571,0,0,1.08089965062721,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,1.19403842309499,1.8697064787778,1.66441758450784,1.7046270474758,2.0125432140206,0.889811221596536,0.457680136793847,2.57092570397506,0.310874401165561,0.147855149989634,0.318593534327405,0.449803112163605,0.621051827505038,0.414706207840855,1.32920857278997,1.04349012362347,0.150257608997218,0.380805212168795,0,0.727394636810238,0.107410557042488,1.39210127963548,1.19428766609585,0.400027764663154,0.686791410365586,1.6837474438296,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,2.20172318598255,0,0,0.212574920101683,0.123935764259002,0,2.22603045457393,0,0,1.76337971845342,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0.354809480650555,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,1.27016115057279,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p64@FN1 | |||
}} |
Revision as of 08:19, 21 January 2014
Short description: | p64@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_64_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 358bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-19 | 76 |
preadipocyte | 9.93e-12 | 12 |
multi fate stem cell | 2.04e-11 | 427 |
somatic stem cell | 5.20e-11 | 433 |
stem cell | 1.73e-10 | 441 |
fibroblast of tunica adventitia of artery | 9.12e-10 | 4 |
fibroblast of the aortic adventitia | 9.12e-10 | 4 |
skin fibroblast | 3.91e-09 | 23 |
preadipocyte of the breast | 1.79e-08 | 3 |
connective tissue cell | 2.99e-08 | 361 |
mesenchymal cell | 3.71e-08 | 354 |
chorionic membrane mesenchymal stem cell | 5.46e-08 | 3 |
hair follicle cell | 5.57e-08 | 5 |
omentum preadipocyte | 9.49e-08 | 3 |
motile cell | 3.06e-07 | 386 |
mesenchymal stem cell of adipose | 5.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.58e-10 | 41 |
artery wall | 9.12e-10 | 4 |
tunica adventitia of artery | 9.12e-10 | 4 |
adventitia | 9.12e-10 | 4 |
tunica adventitia of blood vessel | 9.12e-10 | 4 |
aorta tunica adventitia | 9.12e-10 | 4 |
aorta wall | 9.12e-10 | 4 |
integument | 9.27e-10 | 46 |
integumental system | 9.27e-10 | 46 |
organ component layer | 1.38e-09 | 66 |
omentum | 1.94e-09 | 6 |
peritoneum | 1.94e-09 | 6 |
abdominal cavity | 1.94e-09 | 6 |
visceral peritoneum | 1.94e-09 | 6 |
connective tissue | 2.61e-09 | 371 |
artery | 3.33e-08 | 42 |
arterial blood vessel | 3.33e-08 | 42 |
arterial system | 3.33e-08 | 42 |
egg chorion | 5.46e-08 | 3 |
hair follicle | 5.57e-08 | 5 |
hair follicle placode | 5.57e-08 | 5 |
adipose tissue | 2.30e-07 | 14 |
extraembryonic membrane | 2.52e-07 | 14 |
membranous layer | 2.52e-07 | 14 |
aorta | 3.67e-07 | 21 |
aortic system | 3.67e-07 | 21 |