FFCP PHASE1:Hg19::chr2:228582697..228582708,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16266 | |||
|TSSclassifier=strong | |||
|UniProt=E7EM61,F5H2M8 | |||
|association_with_transcript=6bp_to_ENST00000431622,ENST00000477697,ENST00000541617_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_2_at_SLC19A3_5end | |||
|id=chr2:228582697..228582708,- | |||
|ontology_enrichment_celltype=CL:0000136!5.06e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.57e-21;13!CL:0002563;1.72e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.59e-18,15;CL:0002563,1.78e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.36e-09;1!UBERON:0003124;1.53e-08;1!UBERON:0010227;1.53e-08;1!UBERON:0005062;3.86e-08;4!UBERON:0007284;3.86e-08;4!UBERON:0003104;6.45e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-44!115;UBERON:0001049!2.83e-26!57;UBERON:0005068!2.83e-26!57;UBERON:0006241!2.83e-26!57;UBERON:0007135!2.83e-26!57;UBERON:0002616!1.21e-21!59;UBERON:0003080!1.52e-19!42;UBERON:0003075!4.01e-19!86;UBERON:0007284!4.01e-19!86;UBERON:0001893!5.92e-19!34;UBERON:0002020!1.00e-18!34;UBERON:0003528!1.00e-18!34;UBERON:0000955!3.22e-18!69;UBERON:0006238!3.22e-18!69;UBERON:0002780!3.93e-18!41;UBERON:0001890!3.93e-18!41;UBERON:0006240!3.93e-18!41;UBERON:0002346!8.29e-18!90;UBERON:0002791!1.03e-17!33;UBERON:0001017!1.83e-17!82;UBERON:0005743!2.65e-17!86;UBERON:0001869!2.12e-16!32;UBERON:0000073!9.53e-15!94;UBERON:0001016!9.53e-15!94;UBERON:0000025!1.40e-14!194;UBERON:0004111!1.96e-13!241;UBERON:0003056!1.83e-12!61;UBERON:0002619!7.36e-12!22;UBERON:0002308!1.12e-11!9;UBERON:0000125!1.12e-11!9;UBERON:0000483!1.03e-10!309;UBERON:0002298!1.57e-10!8;UBERON:0000119!1.90e-10!312;UBERON:0000477!2.04e-10!286;UBERON:0000956!4.33e-10!25;UBERON:0000203!4.33e-10!25;UBERON:0001950!2.29e-09!20;UBERON:0002420!3.27e-09!9;UBERON:0007245!3.27e-09!9;UBERON:0010009!3.27e-09!9;UBERON:0010011!3.27e-09!9;UBERON:0000454!3.27e-09!9;UBERON:0009663!4.19e-09!7;UBERON:0000481!1.37e-08!347;UBERON:0000033!1.42e-08!123;UBERON:0000153!2.21e-08!129;UBERON:0007811!2.21e-08!129;UBERON:0000062!5.50e-08!511;UBERON:0003076!6.78e-08!15;UBERON:0003057!6.78e-08!15;UBERON:0000475!7.04e-08!365;UBERON:0004121!1.11e-07!169;UBERON:0000200!1.77e-07!6;UBERON:0000924!2.78e-07!173;UBERON:0006601!2.78e-07!173;UBERON:0000064!9.06e-07!219;UBERON:0009497!9.39e-07!25;UBERON:0000015!9.39e-07!25;UBERON:0002423!9.39e-07!25;UBERON:0006235!9.39e-07!25;UBERON:0004161!9.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.45e-10;3!UBERON:0000946;1.45e-10;3!UBERON:0002079;1.53e-08;1!UBERON:0002135;1.53e-08;1!UBERON:0002146;1.53e-08;1!UBERON:0005623;1.53e-08;1!UBERON:0001242;1.72e-08;4!UBERON:0001262;1.72e-08;4!UBERON:0004786;1.72e-08;4!UBERON:0004808;1.72e-08;4!UBERON:0001277;1.72e-08;4!UBERON:0002423;3.06e-07;25!UBERON:0000160;7.96e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.26e-10,3;UBERON:0009751,1.26e-10,3;UBERON:0000946,1.26e-10,3;UBERON:0002523,1.26e-10,3;UBERON:0005983,1.26e-10,3;UBERON:0002165,1.26e-10,3;UBERON:0002062,1.26e-10,3;UBERON:0007280,1.26e-10,3;UBERON:0002146,1.13e-08,1;UBERON:0005623,1.13e-08,1;UBERON:0002079,1.32e-08,1;UBERON:0002135,1.65e-08,1;UBERON:0001242,1.78e-08,4;UBERON:0001262,1.78e-08,4;UBERON:0004786,1.78e-08,4;UBERON:0004808,1.78e-08,4;UBERON:0001277,1.78e-08,4;UBERON:0003929,1.04e-07,54;UBERON:0009497,2.98e-07,25;UBERON:0000015,2.98e-07,25;UBERON:0002423,2.98e-07,25;UBERON:0006235,2.98e-07,25;UBERON:0004161,2.98e-07,25;UBERON:0000160,8.34e-07,17 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,0,0.893922188854576,0,5.06599756336621,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,0,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4787524930142,0,0,0,0,0.593929361665277,0,0,0.281338832821026,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,15.2249910841307,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,3.91958637459702,0.448788222048861,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65412285735763,0,0,0.265372693510018,5.49927130440263,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0.316553979779393,0,0.0801588202515337,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.11712960508902,1.83328339209347,0,0,0,0.446342914883745,0,0,2.32991899054908,0,0.0824158583811665,0.0674035438541849,0.590564889088493,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.236417121897595,0.209818352539992,0,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0,0,0,2.19828350517124,0,0.129282956361551,0.26446520348538,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0,0,0,0,21.760712134779,37.1021043153596,25.7330284481308,22.2953388882667,0,0.886068179966986,0,0.500763722825999,0,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,3.55924488638614,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,1.68534503309014,0,0,0.271878931907327,0.0657727735628491,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.098150233615243,0.487671699929078,0,0,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,1.09279780251979,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p2@SLC19A3 | |||
}} |
Revision as of 09:01, 21 January 2014
Short description: | p2@SLC19A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC19A3_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 6bp_to_ENST00000431622, ENST00000477697, ENST00000541617_5end |
EntrezGene: | SLC19A3 |
HGNC: | 16266 |
UniProt: | E7EM61F5H2M8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.59e-18 | 15 |
intestinal epithelial cell | 1.78e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
valve | 1.26e-10 | 3 |
cardiac mesenchyme | 1.26e-10 | 3 |
cardial valve | 1.26e-10 | 3 |
tunica intima | 1.26e-10 | 3 |
heart layer | 1.26e-10 | 3 |
endocardium | 1.26e-10 | 3 |
endocardial cushion | 1.26e-10 | 3 |
presumptive endocardium | 1.26e-10 | 3 |
pulmonary valve | 1.13e-08 | 1 |
semi-lunar valve | 1.13e-08 | 1 |
left cardiac atrium | 1.32e-08 | 1 |
mitral valve | 1.65e-08 | 1 |
intestinal mucosa | 1.78e-08 | 4 |
wall of intestine | 1.78e-08 | 4 |
gastrointestinal system mucosa | 1.78e-08 | 4 |
gastrointestinal system epithelium | 1.78e-08 | 4 |
intestinal epithelium | 1.78e-08 | 4 |
gut epithelium | 1.04e-07 | 54 |
epithelium of foregut-midgut junction | 2.98e-07 | 25 |
anatomical boundary | 2.98e-07 | 25 |
hepatobiliary system | 2.98e-07 | 25 |
foregut-midgut junction | 2.98e-07 | 25 |
septum transversum | 2.98e-07 | 25 |
intestine | 8.34e-07 | 17 |