FFCP PHASE1:Hg19::chr20:37353236..37353237,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=140679 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11018 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H598 | |||
|association_with_transcript=131bp_to_ENST00000217420,NM_080552,uc002xjc.2_5end | |||
|description=CAGE_peak_5_at_SLC32A1_5end | |||
|id=chr20:37353236..37353237,+ | |||
|ontology_enrichment_celltype=CL:0000557!4.41e-26!71;CL:0000839!1.47e-24!70;CL:0002057!7.58e-23!42;CL:0002009!6.26e-22!65;CL:0000766!6.62e-22!76;CL:0000860!8.13e-21!45;CL:0002194!1.86e-19!63;CL:0000576!1.86e-19!63;CL:0000040!1.86e-19!63;CL:0000559!1.86e-19!63;CL:0000763!6.22e-18!112;CL:0000049!6.22e-18!112;CL:0002031!4.70e-13!124;CL:0000738!4.91e-12!140;CL:0002032!6.00e-10!165;CL:0000837!6.00e-10!165;CL:0000988!2.92e-09!182;CL:0000037!4.10e-09!172;CL:0000566!4.10e-09!172;CL:0002087!7.31e-08!119;CL:0002274!3.30e-07!5;CL:0000457!3.30e-07!5;CL:0002191!3.30e-07!5;CL:0000097!3.30e-07!5;CL:0000831!3.30e-07!5;CL:0002028!3.30e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.97e-11;39!CL:0000234;3.97e-11;39!CL:0000342;9.82e-11;1!CL:0002565;9.82e-11;1!CL:0000228;2.50e-10;1!CL:0002372;2.50e-10;1!CL:0000860;1.50e-08;33!CL:0002057;1.50e-08;33!CL:0000097;1.76e-08;5!CL:0000235;3.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.64e-14,67;CL:0000839,4.04e-12,66;CL:0000473,4.32e-11,48;CL:0000234,4.32e-11,48;CL:0000766,5.33e-11,72;CL:0000342,1.19e-10,1;CL:0002565,1.19e-10,1;CL:0002009,1.34e-10,61;CL:0000228,1.57e-10,1;CL:0002372,1.57e-10,1;CL:0002194,1.13e-08,59;CL:0000576,1.13e-08,59;CL:0000040,1.13e-08,59;CL:0000559,1.13e-08,59;CL:0000097,1.70e-08,5;CL:0002028,1.70e-08,5;CL:0000763,2.12e-08,108;CL:0000049,2.12e-08,108;CL:0002031,2.15e-07,120;CL:0000235,3.04e-07,6;CL:0000860,3.08e-07,42;CL:0002057,3.08e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.78e-22!80;UBERON:0001474!1.05e-19!86;UBERON:0004765!2.00e-17!101;UBERON:0001434!2.00e-17!101;UBERON:0002390!5.21e-16!102;UBERON:0003061!5.21e-16!102;UBERON:0002193!1.30e-14!112;UBERON:0002405!5.79e-14!115;UBERON:0002204!1.63e-11!167;UBERON:0003081!6.56e-08!216;UBERON:0001737!6.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;9.82e-11;1!UBERON:0001769;9.82e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-12,76;UBERON:0001474,1.41e-11,82;UBERON:0002506,1.19e-10,1;UBERON:0001769,1.19e-10,1;UBERON:0004765,2.09e-10,90;UBERON:0002405,5.10e-10,93;UBERON:0002390,2.00e-09,98;UBERON:0003061,2.00e-09,98;UBERON:0001434,3.33e-09,100;UBERON:0002193,2.12e-08,108;UBERON:0002204,4.91e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.436194716338694,0,0.970336244751265,0,0.822335776043652,0.619412741790207,0.28769239232215,1.0246428261164,0.47296445977717,0.689491361473237,1.29096936716765,0,0.376484679085209,1.36453075028923,0.224723484445085,0,0,1.27867425159808,0.329851300186716,0.598390972864896,0,0.870627715885752,0.56738522469114,1.24564449799115,0,1.0429658368404,0.868755378820466,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19409231913646,0,0,0,0.80823028409406,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.441175890929576,0.653638332277218,0.71181185733329,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,2.05881372358231,0,0,0,0,0,0,0,2.08674728955138,0.70445216541493,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,4.57851856868775,2.28060927094849,0.576479813667846,0.6312121671319,0.761974731506028,0,0,0,0.102827492703324,0.901029173531752,1.14330573052231,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,2.51128545716063,6.32501818449095,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.24900292158013,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.920771839728375,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.286822704408103,0.88424136911809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24411862352257,0,1.04349012362347,0,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SLC32A1 | |||
}} |
Revision as of 11:13, 21 January 2014
Short description: | p5@SLC32A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC32A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_ENST00000217420, NM_080552, uc002xjc.2_5end |
EntrezGene: | SLC32A1 |
HGNC: | 11018 |
UniProt: | Q9H598 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.64e-14 | 67 |
myeloid lineage restricted progenitor cell | 4.04e-12 | 66 |
defensive cell | 4.32e-11 | 48 |
phagocyte | 4.32e-11 | 48 |
myeloid leukocyte | 5.33e-11 | 72 |
pigment cell (sensu Vertebrata) | 1.19e-10 | 1 |
iris pigment epithelial cell | 1.19e-10 | 1 |
macrophage dendritic cell progenitor | 1.34e-10 | 61 |
multinucleate cell | 1.57e-10 | 1 |
myotube | 1.57e-10 | 1 |
monopoietic cell | 1.13e-08 | 59 |
monocyte | 1.13e-08 | 59 |
monoblast | 1.13e-08 | 59 |
promonocyte | 1.13e-08 | 59 |
mast cell | 1.70e-08 | 5 |
basophil mast progenitor cell | 1.70e-08 | 5 |
myeloid cell | 2.12e-08 | 108 |
common myeloid progenitor | 2.12e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.15e-07 | 120 |
macrophage | 3.04e-07 | 6 |
classical monocyte | 3.08e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-12 | 76 |
bone element | 1.41e-11 | 82 |
iris epithelium | 1.19e-10 | 1 |
iris | 1.19e-10 | 1 |
skeletal element | 2.09e-10 | 90 |
immune system | 5.10e-10 | 93 |
hematopoietic system | 2.00e-09 | 98 |
blood island | 2.00e-09 | 98 |
skeletal system | 3.33e-09 | 100 |
hemolymphoid system | 2.12e-08 | 108 |
musculoskeletal system | 4.91e-07 | 167 |