FFCP PHASE1:Hg19::chr3:9439419..9439439,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25566 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C0A6,C9JLA7 | |||
|association_with_transcript=16bp_to_ENST00000402198,ENST00000402466,ENST00000450326,NM_001080517,uc003brs.1,uc003brt.2_5end | |||
|description=CAGE_peak_3_at_SETD5_5end | |||
|id=chr3:9439419..9439439,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.37e-19!182;CL:0000037!2.00e-18!172;CL:0000566!2.00e-18!172;CL:0002057!5.68e-18!42;CL:0000738!2.11e-17!140;CL:0002032!7.99e-17!165;CL:0000837!7.99e-17!165;CL:0000860!3.70e-16!45;CL:0000763!6.83e-14!112;CL:0000049!6.83e-14!112;CL:0002031!1.59e-12!124;CL:0000766!3.88e-12!76;CL:0000557!5.82e-11!71;CL:0002087!1.16e-10!119;CL:0000839!1.98e-09!70;CL:0002009!1.13e-08!65;CL:0000219!5.54e-08!390;CL:0002194!6.11e-08!63;CL:0000576!6.11e-08!63;CL:0000040!6.11e-08!63;CL:0000559!6.11e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-19;33!CL:0002057;1.97e-19;33!CL:0000473;5.08e-11;39!CL:0000234;5.08e-11;39!CL:0000576;6.38e-11;48!CL:0000766;9.19e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.57e-22,177;CL:0000037,5.09e-21,168;CL:0000738,8.21e-21,136;CL:0002032,2.91e-19,161;CL:0000837,2.91e-19,161;CL:0000860,1.22e-18,42;CL:0002057,1.22e-18,42;CL:0000763,8.05e-16,108;CL:0000049,8.05e-16,108;CL:0002031,4.97e-15,120;CL:0000766,5.43e-15,72;CL:0000557,1.82e-13,67;CL:0000473,2.22e-13,48;CL:0000234,2.22e-13,48;CL:0002087,5.31e-13,115;CL:0000839,1.54e-11,66;CL:0002009,7.84e-11,61;CL:0002194,5.57e-10,59;CL:0000576,5.57e-10,59;CL:0000040,5.57e-10,59;CL:0000559,5.57e-10,59;CL:0000219,2.11e-09,386;CL:0000134,1.89e-07,354;CL:0002320,7.46e-07,361;CL:0000034,9.44e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.05e-09!80;UBERON:0002405!2.06e-08!115;UBERON:0001474!2.48e-08!86;UBERON:0002390!2.29e-07!102;UBERON:0003061!2.29e-07!102;UBERON:0002193!2.98e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-11,76;UBERON:0002405,1.82e-10,93;UBERON:0001474,2.35e-10,82;UBERON:0002390,9.52e-09,98;UBERON:0003061,9.52e-09,98;UBERON:0002193,1.62e-08,108;UBERON:0004765,3.56e-08,90;UBERON:0001434,4.66e-07,100;UBERON:0002384,8.15e-07,371 | |||
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| |||
|short_description=p3@SETD5 | |||
}} |
Revision as of 17:11, 21 January 2014
Short description: | p3@SETD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SETD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000402198, ENST00000402466, ENST00000450326, NM_001080517, uc003brs.1, uc003brt.2_5end |
EntrezGene: | SETD5 |
HGNC: | 25566 |
UniProt: | Q9C0A6C9JLA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.57e-22 | 177 |
hematopoietic stem cell | 5.09e-21 | 168 |
leukocyte | 8.21e-21 | 136 |
hematopoietic oligopotent progenitor cell | 2.91e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-19 | 161 |
classical monocyte | 1.22e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-18 | 42 |
myeloid cell | 8.05e-16 | 108 |
common myeloid progenitor | 8.05e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 4.97e-15 | 120 |
myeloid leukocyte | 5.43e-15 | 72 |
granulocyte monocyte progenitor cell | 1.82e-13 | 67 |
defensive cell | 2.22e-13 | 48 |
phagocyte | 2.22e-13 | 48 |
nongranular leukocyte | 5.31e-13 | 115 |
myeloid lineage restricted progenitor cell | 1.54e-11 | 66 |
macrophage dendritic cell progenitor | 7.84e-11 | 61 |
monopoietic cell | 5.57e-10 | 59 |
monocyte | 5.57e-10 | 59 |
monoblast | 5.57e-10 | 59 |
promonocyte | 5.57e-10 | 59 |
motile cell | 2.11e-09 | 386 |
mesenchymal cell | 1.89e-07 | 354 |
connective tissue cell | 7.46e-07 | 361 |
stem cell | 9.44e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-11 | 76 |
immune system | 1.82e-10 | 93 |
bone element | 2.35e-10 | 82 |
hematopoietic system | 9.52e-09 | 98 |
blood island | 9.52e-09 | 98 |
hemolymphoid system | 1.62e-08 | 108 |
skeletal element | 3.56e-08 | 90 |
skeletal system | 4.66e-07 | 100 |
connective tissue | 8.15e-07 | 371 |