FFCP PHASE1:Hg19::chr3:34226238..34226247,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr3:34226238..34226247,+ | |||
|id=chr3:34226238..34226247,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.88e-19;1!CL:0000164;1.88e-19;1!CL:0000502;1.88e-19;1!CL:0000172;1.88e-19;1!CL:0000173;1.88e-19;1!CL:0000123;2.72e-10;2!CL:0000242;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.88e-19,1;CL:0000164,1.88e-19,1;CL:0000502,1.88e-19,1;CL:0000172,1.88e-19,1;CL:0000173,1.88e-19,1;CL:0002351,1.88e-19,1;CL:0000242,2.72e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.88e-19;1 | |||
|ontology_enrichment_disease=DOID:5409!1.18e-10!4;DOID:3119!5.53e-08!14;DOID:171!2.64e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.88e-19;1!DOID:0050619;2.25e-19;1!DOID:1357;2.25e-19;1!DOID:5409;5.39e-19;4!DOID:3119;2.68e-12;14!DOID:1325;2.76e-11;7!DOID:3904;2.76e-11;7!DOID:0050615;8.53e-11;16!DOID:3905;5.53e-09;9!DOID:171;4.04e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.88e-19,1;DOID:0050619,2.25e-19,1;DOID:1357,2.25e-19,1;DOID:5409,5.15e-19,4;DOID:3119,2.74e-12,14;DOID:1325,2.69e-11,7;DOID:3904,2.69e-11,7;DOID:0050615,8.39e-11,16;DOID:3905,5.42e-09,9;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:171,4.04e-08,10;DOID:0050687,1.30e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.22e-11!6;UBERON:0001950!6.35e-09!20;UBERON:0001872!4.54e-08!5;UBERON:0002619!4.55e-08!22;UBERON:0000956!4.95e-07!25;UBERON:0000203!4.95e-07!25;UBERON:0001869!5.96e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.25e-19;1!UBERON:0001825;2.25e-19;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.25e-19,1;UBERON:0001825,2.25e-19,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,6.89458085164684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,223.792932615673,0,0.552567831062295,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33283690706603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53859662001125,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,0,1.93458368795583,0,0,0,0,0,0,0.230467975111559,0,0.883606528698812,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,41.580712008726,0,2.59775988689608,0.109940516745429,45.1378902264354,0,0,49.8536334143214,0,31.3449807645163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,0.248298857183432,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr3:34226238..34226247,+ | |||
}} |
Revision as of 18:07, 21 January 2014
Short description: | p@chr3:34226238..34226247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:34226238..34226247, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.88e-19 | 1 |
enteroendocrine cell | 1.88e-19 | 1 |
type D enteroendocrine cell | 1.88e-19 | 1 |
somatostatin secreting cell | 1.88e-19 | 1 |
pancreatic D cell | 1.88e-19 | 1 |
progenitor cell of endocrine pancreas | 1.88e-19 | 1 |
Merkel cell | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.25e-19 | 1 |
paranasal sinus | 2.25e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.88e-19 | 1 |
paranasal sinus cancer | 2.25e-19 | 1 |
maxillary sinus cancer | 2.25e-19 | 1 |
lung small cell carcinoma | 5.15e-19 | 4 |
gastrointestinal system cancer | 2.74e-12 | 14 |
bronchus cancer | 2.69e-11 | 7 |
bronchogenic carcinoma | 2.69e-11 | 7 |
respiratory system cancer | 8.39e-11 | 16 |
lung carcinoma | 5.42e-09 | 9 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
neuroectodermal tumor | 4.04e-08 | 10 |
cell type cancer | 1.30e-07 | 143 |