FFCP PHASE1:Hg19::chr3:58522908..58522935,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=120 | |||
|TSSclassifier=strong | |||
|UniProt=Q99424 | |||
|association_with_transcript=0bp_to_NM_003500,uc003dkl.2_5end | |||
|description=CAGE_peak_1_at_ACOX2_5end | |||
|id=chr3:58522908..58522935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-20!180;CL:0000680!4.60e-16!57;CL:0000056!4.60e-16!57;CL:0000355!4.60e-16!57;CL:0000057!3.61e-15!75;CL:0000187!3.98e-15!54;CL:0000183!6.54e-15!59;CL:0000192!4.35e-12!42;CL:0000514!4.35e-12!42;CL:0000393!2.26e-11!60;CL:0000211!2.26e-11!60;CL:0000359!5.80e-09!32;CL:0000136!1.21e-07!15;CL:0002620!3.03e-07!23;CL:0000222!6.73e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.09e-09;43!CL:0000187;7.71e-09;55!CL:0000359;3.30e-08;32!CL:0000136;6.62e-08;13!CL:0000393;3.53e-07;61!CL:0000211;3.53e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.34e-17,58;CL:0000056,6.34e-17,58;CL:0000355,6.34e-17,58;CL:0000187,6.96e-16,55;CL:0000057,3.34e-13,76;CL:0000192,8.30e-13,43;CL:0000514,8.30e-13,43;CL:0000393,1.78e-12,61;CL:0000211,1.78e-12,61;CL:0000359,6.33e-09,32;CL:0000136,1.62e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.09e-09;43!CL:0000355;2.48e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.99e-20!365;UBERON:0000914!2.38e-18!83;UBERON:0002329!2.38e-18!83;UBERON:0003077!2.38e-18!83;UBERON:0003059!2.38e-18!83;UBERON:0007282!2.38e-18!83;UBERON:0009618!2.38e-18!83;UBERON:0007285!2.38e-18!83;UBERON:0002385!3.99e-18!63;UBERON:0001015!3.99e-18!63;UBERON:0000383!3.99e-18!63;UBERON:0004290!1.01e-17!70;UBERON:0001134!2.38e-17!61;UBERON:0002036!2.38e-17!61;UBERON:0003082!2.38e-17!61;UBERON:0000119!3.01e-16!312;UBERON:0000481!4.83e-16!347;UBERON:0000483!6.79e-16!309;UBERON:0007023!1.18e-15!115;UBERON:0005256!8.85e-15!143;UBERON:0000477!1.96e-13!286;UBERON:0000486!3.16e-13!82;UBERON:0004111!4.62e-13!241;UBERON:0000025!7.52e-13!194;UBERON:0000490!1.78e-12!138;UBERON:0000468!5.16e-11!659;UBERON:0004872!5.32e-11!84;UBERON:0007100!8.92e-11!27;UBERON:0003914!1.30e-10!118;UBERON:0002100!1.36e-10!216;UBERON:0000467!2.03e-09!625;UBERON:0000480!3.05e-09!626;UBERON:0000948!3.77e-09!24;UBERON:0005498!3.77e-09!24;UBERON:0004140!3.77e-09!24;UBERON:0009881!3.77e-09!24;UBERON:0004141!3.77e-09!24;UBERON:0003084!3.77e-09!24;UBERON:0007005!3.77e-09!24;UBERON:0004139!3.77e-09!24;UBERON:0004291!3.77e-09!24;UBERON:0002049!7.57e-09!79;UBERON:0007798!7.57e-09!79;UBERON:0001009!1.07e-08!113;UBERON:0001637!1.23e-08!42;UBERON:0003509!1.23e-08!42;UBERON:0004572!1.23e-08!42;UBERON:0001981!1.75e-08!60;UBERON:0007500!1.75e-08!60;UBERON:0004537!1.75e-08!60;UBERON:0006965!1.75e-08!60;UBERON:0004573!8.96e-08!33;UBERON:0004571!8.96e-08!33;UBERON:0004535!1.08e-07!110;UBERON:0000055!1.31e-07!69;UBERON:0003075!4.29e-07!86;UBERON:0007284!4.29e-07!86;UBERON:0003104!9.78e-07!238;UBERON:0009142!9.78e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.01e-11;25!UBERON:0000948;2.60e-09;22!UBERON:0002385;5.80e-09;31!UBERON:0001015;5.80e-09;31!UBERON:0000383;5.80e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,3.29e-19,64;UBERON:0001015,3.29e-19,64;UBERON:0000383,3.29e-19,64;UBERON:0007524,2.32e-18,73;UBERON:0001134,2.38e-18,62;UBERON:0002036,2.38e-18,62;UBERON:0003082,2.38e-18,62;UBERON:0003077,7.59e-18,72;UBERON:0007285,7.59e-18,72;UBERON:0002329,1.20e-17,71;UBERON:0003059,1.20e-17,71;UBERON:0007282,1.20e-17,71;UBERON:0004290,1.20e-17,71;UBERON:0009618,1.20e-17,71;UBERON:0007023,1.35e-16,114;UBERON:0005256,1.15e-15,122;UBERON:0003104,2.63e-15,160;UBERON:0009142,2.63e-15,160;UBERON:0007503,5.31e-14,78;UBERON:0000486,1.26e-13,83;UBERON:0000119,1.09e-12,309;UBERON:0000483,1.65e-12,306;UBERON:0007100,7.33e-12,27;UBERON:0000490,4.07e-11,148;UBERON:0010314,2.01e-10,132;UBERON:0000948,4.80e-10,24;UBERON:0005498,4.80e-10,24;UBERON:0004140,4.80e-10,24;UBERON:0009881,4.80e-10,24;UBERON:0004141,4.80e-10,24;UBERON:0003084,4.80e-10,24;UBERON:0007005,4.80e-10,24;UBERON:0004139,4.80e-10,24;UBERON:0004291,4.80e-10,24;UBERON:0000025,4.73e-09,192;UBERON:0000479,5.55e-09,773;UBERON:0004111,1.11e-08,240;UBERON:0004872,2.40e-08,83;UBERON:0002100,2.47e-08,199;UBERON:0001637,8.93e-08,42;UBERON:0003509,8.93e-08,42;UBERON:0004572,8.93e-08,42;UBERON:0003914,1.05e-07,117;UBERON:0004573,2.02e-07,33;UBERON:0004571,2.02e-07,33 | |||
|phase1_expression=5.26867299884614,8.99222200342129,5.77913056793482,8.00586386825043,10.2801051718276,7.85104671690332,0,4.42203911398782,11.2309820125931,0.491467873003018,0,0.436882744260345,0.263766978228454,4.57935505952172,6.62794751455832,2.6893005858071,0.602694528023977,2.92124036154949,2.43966399395253,1.35433163884467,1.63200552995402,2.82109249330279,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,8.71911117614727,4.85877735005415,3.2529523714611,4.01070328508712,4.34539556882471,2.3858578411533,1.45990461090791,2.07976597760949,2.88248216701333,0.966182642624386,9.2995143603376,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0,1.25849830862972,0.825354125820202,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0,0.760272105718513,0.24406205754817,0,1.62028389576352,0.803697554556718,0.44905874525234,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,6.46063537203914,3.41902381494365,9.79827938017819,9.46560848471085,5.32002573297536,3.92474320099615,2.1349799145941,3.7000132262574,8.71390899119346,1.0776853765575,2.94231425604226,2.11900398702904,1.15235184896,1.64025002283658,1.87296046098192,1.1409436430889,2.39117888882882,0.469737994575059,0.647491777472526,0.140450806702248,0.816616685019573,0.859840221182376,4.44300859055791,4.75201142912821,5.19260551484969,3.64064544775211,2.15585442544872,0.168336113954066,0.625592599359821,1.6623846929051,5.70670907145089,7.35570709917647,3.75595147266492,1.70148274740032,10.5839885056429,10.2507546632912,9.11307174986116,6.30191301777245,9.17167510222106,11.8514648420989,8.93360910391631,9.78902726999344,7.50264939741229,10.0973509697646,7.82424138459544,14.7097911705119,9.23024940543197,6.14587799188606,3.89989362314122,0.193260853163297,0,0,0,0,0.232387885739037,0.829288440122964,0,0.36497735907583,4.69348596989448,3.21620469096443,6.90674606762403,7.42988684851167,7.94067429836544,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,5.7620361586396,13.2307840246988,31.6887587054577,7.86261773342101,9.45263850690247,0,1.10689594688802,2.23038153388083,0,0,0,0,0.977424915930974,1.03993478527958,4.3299402607582,1.04337364477569,2.46558257895225,0.433099343283221,0.462985512576611,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0.190493682876507,0,0,1.71072446022705,0,0,0,1.34557301214433,6.5394010324992,0.22001485746285,4.52451005152222,14.3062578340753,0,3.72313363218819,5.2003718455683,1.28603687131071,2.83698264046557,1.0656887160644,2.57360388584666,3.25572963234866,0,0.325736184293735,3.55391948742546,0.791951872933429,10.2489388200259,7.84380112740265,7.09808237392605,0,0,0,0,0,7.13184525203592,5.06734573336527,4.72595541865882,4.29746311775749,0,0,0,0,1.77866236955724,2.60279707715243,0,0,0,0,0,0,8.71109591205893,4.00136416847742,5.96783052139418,2.9115920614313,3.21172179834891,1.10391690523754,2.92853537481783,7.52365249319297,0,1.03473071292505,1.32845119707087,3.87175253937577,3.5622281931914,5.48243240895674,6.51972505240626,0,0,0,0,0,0.604780586659361,5.95458738765064,9.20771839728375,5.89386198309454,6.02254001501795,10.7458522304008,1.76939313257968,7.42090332224955,4.00945203886904,7.10246901252508,4.02423064467665,3.11552657510173,5.34567740915813,0.966875596732978,0,0.0920809889358963,2.75554675595056,2.00300284807389,5.50722542829581,0.902399225814824,0.231046011313244,0,0,0,0,0.510281115829547,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,3.25378394664303,21.9477354809648,0,0,0.574265537996172,0,0,3.67348729510063,2.61882649094895,1.99554777143968,0.137836572484531,6.1229539574916,5.36561767482646,1.61930592090592,4.62966585363034,0.165284915360978,0,0,0.10115778085555,9.761756535243,8.49993336442728,7.6674099717666,1.54016790088044,6.38767236380426,6.08953094452551,8.15426564057248,6.15437012990562,2.97726695487734,2.53103539774981,2.85945290885737,5.88564920016068,5.99114583247489,7.00047145437061,2.35484592059769,4.8565563547495,6.03981465419321,2.94531005864216,4.24583211303964,7.92551605865041,3.79132610615083,5.36397112998549,4.38684281336312,5.28250733783777,4.50449707646353,4.66637925447252,10.1707304958219,1.65409603063837,5.30751180192976,6.13831239355268,10.9967351510671,5.24715801637306,2.63783490051515,4.64735247149625,1.97186921772569,0.717056761020258,1.57198465620994,3.5667105148125,2.12856638442359,6.96655196482292,9.87884678879706,1.13841952129715,1.04980416073495,0,0,0,22.0296493817663,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,1.1490322207942,0.211673582723883,0,0,0,0,2.50634477090067,4.40158622284169,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p1@ACOX2 | |||
}} |
Revision as of 19:26, 21 January 2014
Short description: | p1@ACOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003500, uc003dkl.2_5end |
EntrezGene: | ACOX2 |
HGNC: | 120 |
UniProt: | Q99424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.34e-17 | 58 |
myoblast | 6.34e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.34e-17 | 58 |
muscle cell | 6.96e-16 | 55 |
fibroblast | 3.34e-13 | 76 |
smooth muscle cell | 8.30e-13 | 43 |
smooth muscle myoblast | 8.30e-13 | 43 |
electrically responsive cell | 1.78e-12 | 61 |
electrically active cell | 1.78e-12 | 61 |
vascular associated smooth muscle cell | 6.33e-09 | 32 |
fat cell | 1.62e-08 | 15 |