FFCP PHASE1:Hg19::chr3:61547212..61547223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9671 | |||
|TSSclassifier=strong | |||
|UniProt=P23470,Q49A02 | |||
|association_with_transcript=-19bp_to_ENST00000495879,NM_002841,uc003dla.3,uc003dlb.2,uc003dlc.2_5end | |||
|description=CAGE_peak_4_at_PTPRG_5end | |||
|id=chr3:61547212..61547223,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.00e-20!82;UBERON:0000924!2.82e-20!173;UBERON:0006601!2.82e-20!173;UBERON:0005743!2.83e-20!86;UBERON:0000073!2.23e-19!94;UBERON:0001016!2.23e-19!94;UBERON:0004121!2.68e-19!169;UBERON:0002346!3.89e-19!90;UBERON:0000475!2.08e-18!365;UBERON:0003075!3.70e-18!86;UBERON:0007284!3.70e-18!86;UBERON:0001049!6.76e-18!57;UBERON:0005068!6.76e-18!57;UBERON:0006241!6.76e-18!57;UBERON:0007135!6.76e-18!57;UBERON:0002616!1.10e-17!59;UBERON:0000955!7.02e-17!69;UBERON:0006238!7.02e-17!69;UBERON:0000033!3.07e-16!123;UBERON:0003080!3.11e-15!42;UBERON:0002780!4.22e-15!41;UBERON:0001890!4.22e-15!41;UBERON:0006240!4.22e-15!41;UBERON:0002020!6.30e-15!34;UBERON:0003528!6.30e-15!34;UBERON:0000153!8.10e-15!129;UBERON:0007811!8.10e-15!129;UBERON:0003056!8.50e-15!61;UBERON:0001893!1.07e-14!34;UBERON:0001869!1.68e-14!32;UBERON:0007023!1.89e-14!115;UBERON:0002791!2.40e-14!33;UBERON:0002619!2.23e-13!22;UBERON:0000481!5.73e-13!347;UBERON:0001950!4.22e-12!20;UBERON:0000956!6.16e-12!25;UBERON:0000203!6.16e-12!25;UBERON:0000119!6.51e-12!312;UBERON:0000483!7.33e-12!309;UBERON:0000468!2.21e-11!659;UBERON:0000922!4.38e-09!612;UBERON:0000062!5.51e-08!511;UBERON:0000477!1.44e-07!286;UBERON:0002050!2.28e-07!605;UBERON:0005423!2.28e-07!605;UBERON:0000064!2.61e-07!219;UBERON:0000923!3.54e-07!604;UBERON:0005291!3.54e-07!604;UBERON:0006598!3.54e-07!604;UBERON:0002532!3.54e-07!604;UBERON:0000480!4.01e-07!626;UBERON:0000467!7.48e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.24e-15;22!UBERON:0001950;4.54e-14;20!UBERON:0001869;1.48e-13;32!UBERON:0003528;1.75e-13;34!UBERON:0002020;1.75e-13;34!UBERON:0002791;3.10e-13;32!UBERON:0001893;7.74e-13;34!UBERON:0000956;1.59e-12;25!UBERON:0000203;1.59e-12;25!UBERON:0000922;3.31e-12;49!UBERON:0002780;4.42e-12;41!UBERON:0001890;4.42e-12;41!UBERON:0000073;1.28e-09;53!UBERON:0002616;1.28e-09;53!UBERON:0001017;1.48e-09;75!UBERON:0000955;7.79e-09;68!UBERON:0001016;9.87e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.67e-20,81;UBERON:0001049,2.55e-18,56;UBERON:0005068,2.55e-18,56;UBERON:0006241,2.55e-18,56;UBERON:0007135,2.55e-18,56;UBERON:0001016,3.39e-18,89;UBERON:0002346,1.59e-17,86;UBERON:0004121,4.34e-17,171;UBERON:0000924,4.34e-17,171;UBERON:0006601,4.34e-17,171;UBERON:0003075,1.23e-16,82;UBERON:0007284,1.23e-16,82;UBERON:0010371,1.25e-16,104;UBERON:0000073,1.68e-16,53;UBERON:0002616,1.68e-16,53;UBERON:0002780,2.70e-16,41;UBERON:0001890,2.70e-16,41;UBERON:0003080,2.70e-16,41;UBERON:0006240,2.70e-16,41;UBERON:0000955,3.56e-16,68;UBERON:0006238,3.56e-16,68;UBERON:0002619,1.02e-15,22;UBERON:0003528,1.16e-15,34;UBERON:0002020,1.16e-15,34;UBERON:0001893,2.11e-15,34;UBERON:0001869,3.94e-15,32;UBERON:0002791,7.39e-15,32;UBERON:0007023,8.88e-15,114;UBERON:0001950,3.46e-14,20;UBERON:0010314,5.58e-14,132;UBERON:0003056,5.86e-14,61;UBERON:0000956,1.31e-12,25;UBERON:0000203,1.31e-12,25;UBERON:0011216,6.83e-12,223;UBERON:0000922,2.65e-07,592 | |||
|phase1_expression=2.18014055124668,2.14100523890983,2.11431606143957,1.0007329835313,1.34088328328186,1.74467704820074,0,1.26343974685366,0.783556884599516,0.245733936501509,0,0.218441372130172,1.05506791291381,2.35156070624089,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0.61560529038394,0.408001382488506,0.626909442956176,0.572471974262113,0.958120975510189,0.502170558379211,5.8074188368443,5.17233713534658,4.72264687882075,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,4.87613732627923,1.34140171940727,1.15076305659177,0.722878304769133,0,0.869079113764942,0.795285947051099,0.973269740605272,2.55244006342983,1.55210578223795,1.58102614247627,2.94702919869853,0,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0.417989933073621,0.258416759169329,1.42306505074684,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.714397826272638,0.22452937262617,0.788280363383256,0,0.949265659568129,1.46561395144326,0,0,0.436094052142534,3.97577561356255,0.759783069987479,0.662045904066094,2.86836620748814,1.41867352879343,2.80338800071154,0,0.49333509683432,0.933633106199299,0.808264032418128,0.980771418680752,1.05950199351452,4.60940739583999,0.70296429550139,1.24864030732128,0.570471821544449,0.896692083310806,1.996386476944,0.809364721840658,1.12360645361799,1.02077085627447,1.59684612505298,3.40975077880026,2.37600571456411,3.4617370098998,0,0,0.505008341862199,1.25118519871964,1.10825646193673,2.63386572528503,1.22595118319608,5.55880817954408,0.340296549480063,1.07633781413317,2.13557388818567,1.27159140695737,0.600182192168805,1.95799805553034,1.03056216018252,1.48893485065272,2.02531598689519,0.292311015483596,1.7670364197088,1.28869858099219,1.13152239773168,3.90510551768276,1.5112814734146,0.339121184620975,1.15956511897978,1.36373060295417,1.14721838155602,5.3668430697022,4.37348235460901,3.95059405756363,5.07939169575315,4.03713361401005,6.20461510428911,1.56449532329816,3.21620469096443,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0,0.590789906681404,0,1.35287282397425,0.857839051492628,1.09750285408626,0,1.10581869652794,1.66659201285353,0.977424915930974,1.03993478527958,0,2.31860809950154,1.76113041353732,0.288732895522148,0,0,0,0,0,0,0,0,1.84780341018745,0.425325291727159,0.716468181622786,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0.444485260045183,0.763976851116555,0,0,0.308482478109971,0,0,1.23344192779897,0.43596006883328,0.95339771567235,1.29271715757778,0,2.535908257668,0.797814349754612,2.08014873822732,0.257207374262142,1.41849132023278,1.3321108950805,2.57360388584666,0.542621605391443,0,0,0.710783897485092,0,0,0,0.699810938274399,0,0,0,2.15662369942424,2.29723871668228,1.42636905040718,1.01346914667305,2.05476322550383,1.43248770591916,0,0,0,0.128343036279748,4.8277978602268,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,2.69921281782108,3.50119364741774,1.35632511849868,2.28767947683888,1.60586089917446,2.52323864054295,3.86566669475954,2.40756879782175,0,2.0694614258501,1.32845119707087,0.921845842708516,1.65078867489357,0.979005787313703,0.686286847621712,0,0,0,0,1.66435439510497,0,1.73675465473144,1.53461973288062,1.12264037773229,2.30650468660262,0,1.12597744800525,0,0.616838775210622,0.710246901252508,0.492762936082855,1.55776328755086,0.464841513839837,1.57117284469109,1.80455823272956,1.28913384510255,1.03333003348146,0.910455840033585,1.04899531967539,0.451199612907412,0.847168708148562,1.56869953835371,0,1.26661954671451,0,0.170093705276516,2.15915916102139,0,0.270946437543853,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,0.769350375349168,0.328014645699706,0.976135183992909,0.824328093181778,1.00726411300178,0.907604499126468,1.72279661398852,1.95018073810956,0,2.32009723901093,0.770243085573222,0.767518373630648,1.10269257987624,2.68550612170684,2.32026710262766,1.27839941124151,0.712256285173899,1.4875642382488,1.15314040419064,2.4246415373971,0.809262246844399,0,2.83331112147576,0.6970372701606,1.84820148105653,0,0.869932992075073,1.48259375283136,0.286249773483982,2.232950216158,1.2655176988749,3.24071329670502,0.255897791311334,6.41908482050881,0.636406495851874,0,0.899362287916574,1.92175920815238,0.942499218765491,0.808729926293264,0,0.421258456238981,0,0.731140468893853,0,0.9554993798559,1.69686518344455,2.26016233240486,0.551365343546124,0,0.438450885253763,0.578775534266688,1.9676842561399,0.202910376962704,0,0,0.286822704408103,0.88424136911809,0,0,0.422215270595328,1.31717957183961,1.13841952129715,1.39973888097993,0.577332676353072,1.34060455107157,0,0.941438007767792,0.86101074534246,0,0,1.60806380144872,0,0,0,0,0,0,0,0,0.320472213382419,5.77487913158015,0,0,0,0,0.79713136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| |||
|short_description=p4@PTPRG | |||
}} |
Revision as of 19:31, 21 January 2014
Short description: | p4@PTPRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTPRG_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000495879, NM_002841, uc003dla.3, uc003dlb.2, uc003dlc.2_5end |
EntrezGene: | PTPRG |
HGNC: | 9671 |
UniProt: | P23470Q49A02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data