FFCP PHASE1:Hg19::chr3:97483675..97483686,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13210 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENST00000496713_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_5_at_ARL6_5end | |||
|id=chr3:97483675..97483686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.41e-09;6!CL:0000404;3.41e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.03e-09,6;CL:0000031,4.03e-09,6;CL:0000404,4.03e-09,6;CL:0000047,4.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;3.41e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.18e-18!94;UBERON:0001016!1.18e-18!94;UBERON:0001017!9.20e-18!82;UBERON:0005743!2.12e-17!86;UBERON:0001049!3.82e-17!57;UBERON:0005068!3.82e-17!57;UBERON:0006241!3.82e-17!57;UBERON:0007135!3.82e-17!57;UBERON:0000955!1.16e-16!69;UBERON:0006238!1.16e-16!69;UBERON:0002616!2.24e-16!59;UBERON:0001869!2.41e-14!32;UBERON:0002020!2.66e-14!34;UBERON:0003528!2.66e-14!34;UBERON:0002780!1.50e-13!41;UBERON:0001890!1.50e-13!41;UBERON:0006240!1.50e-13!41;UBERON:0001893!4.00e-13!34;UBERON:0003080!4.73e-13!42;UBERON:0003075!7.84e-13!86;UBERON:0007284!7.84e-13!86;UBERON:0002346!1.46e-12!90;UBERON:0002791!3.41e-12!33;UBERON:0002619!3.01e-11!22;UBERON:0003056!6.72e-11!61;UBERON:0004121!8.32e-11!169;UBERON:0000924!9.19e-11!173;UBERON:0006601!9.19e-11!173;UBERON:0000033!8.45e-10!123;UBERON:0001950!1.97e-09!20;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000153!8.71e-09!129;UBERON:0007811!8.71e-09!129;UBERON:0007023!1.63e-08!115;UBERON:0000475!2.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;7.50e-11;5!UBERON:0002619;7.35e-09;22!UBERON:0000956;7.34e-08;25!UBERON:0000203;7.34e-08;25!UBERON:0001905;1.70e-07;2!UBERON:0002360;1.70e-07;2!UBERON:0001954;1.70e-07;2!UBERON:0002757;1.70e-07;2!UBERON:0010134;1.70e-07;2!UBERON:0000094;1.70e-07;2!UBERON:0003022;1.70e-07;2!UBERON:0005408;1.70e-07;2!UBERON:0002421;1.70e-07;2!UBERON:0001899;1.70e-07;2!UBERON:0002600;1.70e-07;2!UBERON:0010743;1.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-12,89;UBERON:0001017,4.60e-11,81;UBERON:0002021,5.57e-11,5;UBERON:0002619,6.63e-09,22;UBERON:0000956,6.70e-08,25;UBERON:0000203,6.70e-08,25;UBERON:0011216,1.25e-07,223;UBERON:0001954,1.36e-07,2;UBERON:0003022,1.36e-07,2;UBERON:0002421,1.36e-07,2;UBERON:0002600,1.36e-07,2;UBERON:0001905,1.64e-07,2;UBERON:0002757,1.64e-07,2;UBERON:0010134,1.64e-07,2;UBERON:0005408,1.64e-07,2;UBERON:0001899,1.64e-07,2;UBERON:0002360,2.12e-07,2;UBERON:0000094,2.12e-07,2;UBERON:0010743,2.12e-07,2;UBERON:0002780,2.45e-07,41;UBERON:0001890,2.45e-07,41;UBERON:0003080,2.45e-07,41;UBERON:0006240,2.45e-07,41;UBERON:0003056,6.63e-07,61 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.89515962028049,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,1.05562704063997,0,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0.709163045303809,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,1.09692698576986,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0,1.58186518546373,0.137041924646751,0,0.379864775735272,0,0.0801588202515337,0,0.39961921916426,0,0,0.686379991447858,0,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0,1.24632101408756,0,0,0.242998226632099,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.854183854313742,0.250381861413,0.573409195690071,0.221858103073705,0.124192805882767,0.415045904808692,0,0,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,31.4848449278311,0.157265941855896,0.327628914576042,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0.321146125482298,1.41696576325585,0.159633859057151,0,1.76450187355203,0.0691572524642179,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0.405225507710368,0,0,0.253663240775627,1.09394961803644,0.548257766857182,0,0.175871244359621,0,0,1.3451348888753,0,0,0,0,0.342976018874837,0.611727596791485,0,0.118193840883968,0.222462803784138,0.078493092850514,0.314231179832004,0,0,0,0,0.285906176706625,2.3702041759909,0,0,0,0.207216164163037,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,0.994753875806841,0,0,2.30875085165401,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,2.61810414204226,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@ARL6 | |||
}} |
Revision as of 20:02, 21 January 2014
Short description: | p5@ARL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARL6_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 64bp_to_ENST00000496713_5end |
EntrezGene: | ARL6 |
HGNC: | 13210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.03e-09 | 6 |
neuroblast | 4.03e-09 | 6 |
electrically signaling cell | 4.03e-09 | 6 |
neuronal stem cell | 4.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-12 | 89 |
central nervous system | 4.60e-11 | 81 |
occipital lobe | 5.57e-11 | 5 |
regional part of cerebral cortex | 6.63e-09 | 22 |
cerebral cortex | 6.70e-08 | 25 |
pallium | 6.70e-08 | 25 |
organ system subdivision | 1.25e-07 | 223 |
Ammon's horn | 1.36e-07 | 2 |
lobe parts of cerebral cortex | 1.36e-07 | 2 |
hippocampal formation | 1.36e-07 | 2 |
limbic lobe | 1.36e-07 | 2 |
pineal body | 1.64e-07 | 2 |
regional part of epithalamus | 1.64e-07 | 2 |
secretory circumventricular organ | 1.64e-07 | 2 |
circumventricular organ | 1.64e-07 | 2 |
epithalamus | 1.64e-07 | 2 |
meninx | 2.12e-07 | 2 |
membrane organ | 2.12e-07 | 2 |
meningeal cluster | 2.12e-07 | 2 |
regional part of forebrain | 2.45e-07 | 41 |
forebrain | 2.45e-07 | 41 |
anterior neural tube | 2.45e-07 | 41 |
future forebrain | 2.45e-07 | 41 |
pre-chordal neural plate | 6.63e-07 | 61 |