FFCP PHASE1:Hg19::chr3:142315294..142315315,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9090 | |||
|TSSclassifier=strong | |||
|UniProt=C9J0F3 | |||
|association_with_transcript=0bp_to_ENST00000464320_5end | |||
|description=CAGE_peak_3_at_PLS1_5end | |||
|id=chr3:142315294..142315315,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.43e-20!254;CL:0000223!1.52e-12!59;CL:0002076!7.50e-10!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.43e-15,253;CL:0000223,7.40e-13,58;CL:0002076,5.95e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.09e-16;30!UBERON:0006595;1.04e-09;86!UBERON:0009497;2.28e-09;13!UBERON:0008947;8.46e-07;29 | |||
|ontology_enrichment_disease=DOID:305!6.52e-39!106;DOID:0050687!1.34e-27!143;DOID:162!1.17e-21!235;DOID:14566!6.25e-21!239;DOID:299!2.69e-13!25;DOID:0050686!2.35e-09!137;DOID:1749!1.60e-08!14;DOID:7!5.85e-07!39;DOID:0050615!5.85e-07!16;DOID:3119!6.67e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;5.85e-17;25!DOID:305;1.87e-10;106!DOID:3119;4.40e-09;14!DOID:0050615;1.62e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-32,106;DOID:0050687,1.87e-24,143;DOID:299,7.00e-17,25;DOID:162,5.59e-13,235;DOID:14566,2.01e-12,239;DOID:3119,5.05e-09,14;DOID:0050615,1.77e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!4.09e-20!155;UBERON:0001555!4.09e-20!155;UBERON:0007026!4.09e-20!155;UBERON:0004921!4.87e-20!129;UBERON:0004185!4.87e-20!129;UBERON:0004119!9.13e-20!169;UBERON:0000925!9.13e-20!169;UBERON:0006595!9.13e-20!169;UBERON:0000077!1.35e-15!130;UBERON:0001041!4.87e-12!98;UBERON:0001004!1.21e-10!72;UBERON:0005911!2.38e-10!82;UBERON:0005153!8.32e-10!37;UBERON:0008947!2.89e-09!38;UBERON:0003258!2.89e-09!38;UBERON:0000466!3.39e-09!126;UBERON:0000065!3.99e-09!53;UBERON:0005409!2.33e-08!35;UBERON:0005177!6.92e-08!107;UBERON:0000481!7.97e-08!347;UBERON:0000344!1.42e-07!12;UBERON:0000464!3.05e-07!104;UBERON:0002048!3.99e-07!22;UBERON:0000117!3.99e-07!22;UBERON:0000171!3.99e-07!22;UBERON:0000170!3.99e-07!22;UBERON:0005597!3.99e-07!22;UBERON:0000118!3.99e-07!22;UBERON:0000063!4.33e-07!97;UBERON:0000160!6.96e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.35e-19;22!UBERON:0004921;8.47e-19;33!UBERON:0000160;6.22e-16;17!UBERON:0002423;3.62e-11;25!UBERON:0002294;1.01e-10;7!UBERON:0001173;1.01e-10;7!UBERON:0002048;1.70e-09;22!UBERON:0000117;1.70e-09;22!UBERON:0000171;1.70e-09;22!UBERON:0000170;1.70e-09;22!UBERON:0000059;2.22e-09;11!UBERON:0001007;1.86e-08;81!UBERON:0002108;7.16e-08;4!UBERON:0001555;7.68e-08;54!UBERON:0005178;1.26e-07;34!UBERON:0002224;1.26e-07;34!UBERON:0004907;4.57e-07;5!UBERON:0001041;6.05e-07;14!UBERON:0005181;6.06e-07;35!UBERON:0002110;8.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.98e-27,118;UBERON:0001007,5.37e-26,145;UBERON:0001555,5.37e-26,145;UBERON:0007026,5.37e-26,145;UBERON:0004119,3.11e-22,160;UBERON:0000925,3.11e-22,160;UBERON:0006595,3.11e-22,160;UBERON:0005911,3.54e-17,82;UBERON:0005409,1.15e-16,25;UBERON:0000160,5.59e-16,17;UBERON:0001041,9.37e-14,87;UBERON:0011216,9.69e-12,223;UBERON:0005177,3.80e-11,101;UBERON:0009497,4.74e-11,25;UBERON:0000015,4.74e-11,25;UBERON:0002423,4.74e-11,25;UBERON:0006235,4.74e-11,25;UBERON:0004161,4.74e-11,25;UBERON:0005153,1.08e-10,37;UBERON:0003929,4.15e-10,54;UBERON:0002048,1.57e-09,22;UBERON:0000117,1.57e-09,22;UBERON:0000171,1.57e-09,22;UBERON:0000170,1.57e-09,22;UBERON:0005597,1.57e-09,22;UBERON:0000118,1.57e-09,22;UBERON:0000059,2.02e-09,11;UBERON:0009856,4.00e-09,26;UBERON:0005178,7.19e-09,34;UBERON:0002224,7.19e-09,34;UBERON:0009854,9.67e-09,23;UBERON:0005181,1.60e-08,35;UBERON:0002294,3.56e-08,9;UBERON:0001173,3.56e-08,9;UBERON:0004912,3.56e-08,9;UBERON:0007499,7.02e-08,25;UBERON:0009569,7.73e-08,112;UBERON:0002108,8.28e-08,4;UBERON:0005157,1.34e-07,47;UBERON:0008835,1.82e-07,22;UBERON:0003894,1.82e-07,22;UBERON:0001046,3.16e-07,19;UBERON:0004907,4.09e-07,5;UBERON:0002110,6.85e-07,3;UBERON:0006242,6.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.441175890929576,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,2.95172252503473,0.171567810298526,0.219500570817251,0,0.201057944823262,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0.93733833986777,0.335964256397719,0.567100388969546,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.40101294060657,1.84161977871793,0,0,0,0.451199612907412,0.770153371044148,0,0,0.527758144464379,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0,0.877039506583738,0.522870902049801,2.82095137628028,0,1.62689197332152,2.16386124460217,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.826424576804891,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,21.1468810661288,0.146508179271894,0.242721043499027,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0.211125408127993,0.597743964753209,4.42054264849836,2.77126022639704,0.306806047506464,0,0,4.31368085507169,17.1860327688585,0,0.986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,2.0990399999087,0,2.84483620713749,5.84783395673362,2.12748913591143,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0.557694977114413,0.230850775511391,0,0.23056390438806,11.3992208400411,1.3037684630641,0.31900115973192,0,0,1.02193298195737,0,0.498635045700469,0,0.392125068635479,0.335643173951685,0.189753732724185,0.317873157960757,11.3938954845135,4.57051862845614,3.25112064298064,0.865554558968364,8.95735737970654,26.1834390929884,16.4978139132079,0,0,0,0.067401132980677,0,0.234264445725339,0,0.978323094660449,0,0,3.62972148145992,0,0,0.60129367765797,0.72581733978073,0,0,0,0,3.41531455235751,0,2.08271686002157,2.54780233277382,0.609414446062818,0.34945333648406,0.343972064943233,0.290268993867255,0.438535902517113,0.492692742319255,1.06687918137261,0,0,0.274083849293502,0,0.126621591911757,1.17330829640882,1.92381168603681,3.84215390530835,0.19980960958213,14.2649512982565,0.687219576995494,2.74551996579143,3.31326035372744,0.124252535565433,1.41416420770077,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,2.1964690054889,0,0,0,0,0,1.41809728153003,1.15382201733633,1.3480708770837,1.08270229666224,0.0846733320657845,0,0.136203406111576,0.643012593860077,0.962776056180637,1.66176135211674,0,0,0.0607495566580247,0.335434687599266,4.96475955984948,0.786818822024972,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,3.07759690723973,0,0.387848869084652,0,4.10608410922391,2.11444506695002,1.49502377594773,1.57204305099666,2.07119527673598,0,0,0.365377795142688,1.27668251554036,0,0,0,0,1.41348686625211,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,1.12482367165896,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,5.07149096060705,0,0.213383459388282,0.172214979660816,0,0,0.839277046316667,0,0,0,0.157265941855896,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,4.2203518955441,0.943757786781923,0.366857197043358,0.346576998451015,0,0,0,0.150420656698515,0,0.781514011233092,1.83334686136996,0,1.33070477595341,0,0,0.206686796501184,0.0634158101939068,0,3.83780436800028,0.496211178389294,0,1.91643641459393,0.535701835878287,0.336283722218824,1.82089681270989,1.82129753081038,0.0887023701626388,0.115233987555779,0.171488009437418,0.679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| |||
|short_description=p3@PLS1 | |||
}} |
Revision as of 21:45, 21 January 2014
Short description: | p3@PLS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464320_5end |
EntrezGene: | PLS1 |
HGNC: | 9090 |
UniProt: | C9J0F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.43e-15 | 253 |
endodermal cell | 7.40e-13 | 58 |
endo-epithelial cell | 5.95e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-32 | 106 |
cell type cancer | 1.87e-24 | 143 |
adenocarcinoma | 7.00e-17 | 25 |
cancer | 5.59e-13 | 235 |
disease of cellular proliferation | 2.01e-12 | 239 |
gastrointestinal system cancer | 5.05e-09 | 14 |
respiratory system cancer | 1.77e-07 | 16 |