FFCP PHASE1:Hg19::chr3:196366587..196366604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375387 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24613 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_ENST00000461791_5end | |||
|coexpression_cluster_id=C2737 | |||
|description=CAGE_peak_3_at_LRRC33_5end | |||
|id=chr3:196366587..196366604,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.12e-63!172;CL:0000566!4.12e-63!172;CL:0000988!4.54e-60!182;CL:0002032!1.70e-58!165;CL:0000837!1.70e-58!165;CL:0000738!4.72e-50!140;CL:0000763!8.73e-42!112;CL:0000049!8.73e-42!112;CL:0002087!2.00e-41!119;CL:0002031!2.22e-41!124;CL:0000557!4.74e-29!71;CL:0000766!1.27e-28!76;CL:0000839!2.46e-26!70;CL:0002009!4.44e-26!65;CL:0002194!3.39e-25!63;CL:0000576!3.39e-25!63;CL:0000040!3.39e-25!63;CL:0000559!3.39e-25!63;CL:0002057!3.65e-20!42;CL:0000860!2.62e-17!45;CL:0000542!3.50e-14!53;CL:0000051!3.50e-14!53;CL:0000134!3.80e-14!358;CL:0000838!1.30e-13!52;CL:0002320!4.42e-13!365;CL:0000219!3.15e-12!390;CL:0000034!1.35e-10!444;CL:0000048!1.21e-09!430;CL:0000723!5.41e-09!436;CL:0000945!1.14e-07!24;CL:0000826!1.14e-07!24;CL:0000451!1.58e-07!10;CL:0002393!2.05e-07!9;CL:0002397!2.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.76e-20;48!CL:0000473;2.54e-19;39!CL:0000234;2.54e-19;39!CL:0000766;3.26e-18;69!CL:0000763;8.76e-18;100!CL:0000860;6.70e-17;33!CL:0002057;6.70e-17;33!CL:0000738;1.99e-15;136!CL:0002087;3.17e-13;104!CL:0000988;5.07e-13;177!CL:0000451;1.46e-11;10!CL:0000990;9.98e-10;8!CL:0002393;2.43e-08;6!CL:0002397;2.43e-08;6!CL:0000235;3.86e-08;6!CL:0000945;9.12e-08;24!CL:0000840;2.02e-07;5!CL:0000542;4.23e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.50e-85,168;CL:0000988,7.44e-83,177;CL:0002032,7.72e-78,161;CL:0000837,7.72e-78,161;CL:0000738,1.54e-67,136;CL:0000763,1.29e-64,108;CL:0000049,1.29e-64,108;CL:0002087,9.31e-55,115;CL:0002031,1.40e-53,120;CL:0000557,5.01e-47,67;CL:0000766,2.02e-46,72;CL:0002009,1.72e-43,61;CL:0000839,2.56e-42,66;CL:0002194,5.14e-42,59;CL:0000576,5.14e-42,59;CL:0000040,5.14e-42,59;CL:0000559,5.14e-42,59;CL:0000473,3.01e-34,48;CL:0000234,3.01e-34,48;CL:0000860,7.72e-28,42;CL:0002057,7.72e-28,42;CL:0000134,1.72e-23,354;CL:0002320,2.92e-22,361;CL:0000219,3.52e-20,386;CL:0000034,8.17e-14,441;CL:0000048,9.13e-14,427;CL:0000723,4.57e-13,433;CL:0000542,2.07e-12,53;CL:0000051,2.07e-12,53;CL:0000838,1.17e-11,52;CL:0000451,1.76e-11,10;CL:0002393,2.73e-11,9;CL:0002397,2.73e-11,9;CL:0000990,1.24e-09,8;CL:0000235,4.39e-08,6;CL:0000945,6.77e-08,24;CL:0000826,6.77e-08,24;CL:0000840,2.11e-07,5;CL:0001029,2.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-20;42!CL:0000049;5.47e-18;108!CL:0000051;4.23e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.91e-18!51;DOID:0060083!1.91e-18!51;DOID:1240!2.04e-16!39;DOID:8692!1.55e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.02e-16;39!DOID:8692;5.79e-16;31!DOID:2531;1.90e-13;51!DOID:0060083;1.90e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.16e-23,51;DOID:0060083,2.16e-23,51;DOID:1240,5.15e-22,39;DOID:8692,1.43e-16,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.25e-36!102;UBERON:0003061!9.25e-36!102;UBERON:0002193!4.29e-33!112;UBERON:0002371!4.84e-26!80;UBERON:0001474!1.51e-22!86;UBERON:0002405!4.02e-18!115;UBERON:0004765!9.79e-17!101;UBERON:0001434!9.79e-17!101;UBERON:0003081!1.27e-14!216;UBERON:0002384!2.92e-12!375;UBERON:0002204!7.40e-08!167;UBERON:0000178!2.55e-07!15;UBERON:0000179!2.55e-07!15;UBERON:0000463!2.55e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-10;15!UBERON:0000179;2.34e-10;15!UBERON:0000463;2.34e-10;15!UBERON:0002390;3.61e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-57,98;UBERON:0003061,1.09e-57,98;UBERON:0002193,7.15e-51,108;UBERON:0002371,3.62e-42,76;UBERON:0002405,7.45e-41,93;UBERON:0001474,1.86e-37,82;UBERON:0004765,3.47e-32,90;UBERON:0001434,7.80e-27,100;UBERON:0002384,9.76e-22,371;UBERON:0003081,4.43e-18,203;UBERON:0000178,2.02e-10,15;UBERON:0000179,2.02e-10,15;UBERON:0000463,2.02e-10,15;UBERON:0002204,4.93e-10,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0,6.80079311156766,4.59763300919696,5.90330859852594,7.86728553697808,3.0706351847777,7.7408061658038,0,0,0,0,1.70603078984906,2.34880351467878,7.75593571944628,7.01905566145496,6.07630438004385,3.35873211359887,3.2389366601898,1.80302897343931,1.74477886535478,1.51150377475524,1.94067248950253,1.39457422143411,2.46700732813095,1.85823822537062,0.863077176966451,2.30544635876191,3.78371567821736,4.13694816883942,3.22742341791913,1.35426486594342,1.88242339542605,2.18324920046277,1.12361742222542,0.612167784741805,2.24650318953266,3.19668562899521,2.63881040149373,1.99463657621632,1.70489900213078,0.290209238628584,3.40431134814684,1.24564449799115,2.76373531782418,6.77927793946262,3.69221035998698,1.21079900526674,1.47311054395026,0.949387162322653,4.43636101255078,5.52771179909113,6.9187353017764,11.0082058523565,5.55654503513573,5.30394436100364,6.27028036230747,3.18266683518544,4.56660384411585,0,0.546138611262131,0,0.426730222566507,2.00197993518006,1.72425731986345,2.64417949113945,0.954053754535364,5.12291672198504,7.04684627245127,7.26319133437935,5.28685314316103,2.24203425192614,7.11137028892708,0.786839080455332,0.393010762749165,0.822405995998037,4.17966238476695,0.32592226663359,0.473447805734733,0,3.00808233589969,0.589211814949674,1.32920336750173,0.541607727530031,2.0494611156108,3.77172107923647,3.61763390128087,1.93445012450094,1.15921234294021,0.741432815810302,0.267540828089713,3.1360657141493,4.19244567980995,1.53288197440768,1.71813722741315,1.01207876807801,1.27426165729639,0.651083453856419,3.8018081777935,1.20460095262218,1.91979916731628,0,1.4206635122641,0.821127996921047,0.80642697289893,0,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,11.0346113842592,8.88061660226263,8.64226743372624,3.33886874027479,6.86393892936153,2.60020250930695,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0.302714855289863,0,0,0.936480230490962,1.71141546463335,1.49448680551801,0.352303495931295,0,0,0.408308342509787,0.245668634623536,0.309977343527296,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.662648841607426,0.813357600086629,0.518305275076852,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,0,0,0,0,3.97316789473185,0,0.171567810298526,0.109750285408626,0,0,0,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,4.18568910348575,9.82817913584798,4.60756603095058,0,0,0.141775097242386,0,0,0.383382679165211,0.985326475791887,1.05658120815871,3.52457796419313,3.89123874225796,3.66103056936502,0.380987365753014,0.763976851116555,0,1.71072446022705,1.02827492703324,0.901029173531752,0.285826432630578,0.336393253036082,0,0.1466765716419,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,9.72990245129524,5.02257091432126,4.21667878966063,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,2.35378802386407,1.57624608161542,0.431255149719035,1.66845947163673,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,2.68798433959754,4.96142661882819,3.52200940751366,0,1.66435439510497,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.164254312027618,2.07701771673448,0.464841513839837,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0.451199612907412,0.385076685522074,0,1.46139224653261,0,0,0,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0.512900250232778,0.984043937099117,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.340906509664404,0,0,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0,0.511795582622668,0,0.95460974377781,0,0.179872457583315,0.54907405947211,0,0.202182481573316,0,1.26377536871694,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0.143411352204052,0,0.35667105148125,1.06428319221179,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.188287601553558,0,0,0,0,1.01489521846434,3.0585488285695,2.27858874869665,3.33524485640905,1.64544909234478,1.29694662238543,2.70015718619057,3.17250070517708,1.28188885352968,0,2.20536194382929,5.38829207864584,0.432807638929335,8.75044673185494,2.71024663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| |||
|short_description=p3@LRRC33 | |||
}} |
Revision as of 23:34, 21 January 2014
Short description: | p3@LRRC33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC33_5end |
Coexpression cluster: | C2737_Monocytederived_granulocyte_chronic_Dendritic_Basophils_Macrophage_CD14 |
Association with transcript: | -23bp_to_ENST00000461791_5end |
EntrezGene: | LRRC33 |
HGNC: | 24613 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-57 | 98 |
blood island | 1.09e-57 | 98 |
hemolymphoid system | 7.15e-51 | 108 |
bone marrow | 3.62e-42 | 76 |
immune system | 7.45e-41 | 93 |
bone element | 1.86e-37 | 82 |
skeletal element | 3.47e-32 | 90 |
skeletal system | 7.80e-27 | 100 |
connective tissue | 9.76e-22 | 371 |
lateral plate mesoderm | 4.43e-18 | 203 |
blood | 2.02e-10 | 15 |
haemolymphatic fluid | 2.02e-10 | 15 |
organism substance | 2.02e-10 | 15 |
musculoskeletal system | 4.93e-10 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.16e-23 | 51 |
immune system cancer | 2.16e-23 | 51 |
leukemia | 5.15e-22 | 39 |
myeloid leukemia | 1.43e-16 | 31 |