FFCP PHASE1:Hg19::chr4:26321361..26321377,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |||
|TSSclassifier=strong | |||
|UniProt=Q06330 | |||
|association_with_transcript=29bp_to_ENST00000342295,ENST00000345843,NM_005349,NM_203283,uc003grx.1,uc003gry.1_5end | |||
|description=CAGE_peak_6_at_RBPJ_5end | |||
|id=chr4:26321361..26321377,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.68e-52!172;CL:0000566!8.68e-52!172;CL:0000988!4.56e-50!182;CL:0002032!1.58e-48!165;CL:0000837!1.58e-48!165;CL:0000738!2.47e-41!140;CL:0000763!2.10e-35!112;CL:0000049!2.10e-35!112;CL:0002087!1.53e-32!119;CL:0002031!2.77e-32!124;CL:0000766!1.94e-24!76;CL:0000557!3.26e-21!71;CL:0002009!1.48e-20!65;CL:0000839!2.55e-20!70;CL:0002194!8.51e-20!63;CL:0000576!8.51e-20!63;CL:0000040!8.51e-20!63;CL:0000559!8.51e-20!63;CL:0000860!9.41e-16!45;CL:0002057!8.69e-15!42;CL:0000542!1.74e-11!53;CL:0000051!1.74e-11!53;CL:0000838!4.06e-11!52;CL:0000134!6.75e-11!358;CL:0000219!3.41e-10!390;CL:0002320!8.97e-10!365;CL:0000084!7.55e-07!25;CL:0000827!7.55e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-17;33!CL:0002057;1.17e-17;33!CL:0000576;6.82e-16;48!CL:0000473;4.19e-15;39!CL:0000234;4.19e-15;39!CL:0000763;4.08e-13;100!CL:0000738;1.37e-12;136!CL:0000766;4.11e-12;69!CL:0000988;1.86e-11;177!CL:0002087;3.10e-10;104!CL:0000542;2.15e-09;53!CL:0000094;7.18e-09;8!CL:0000945;1.20e-08;24!CL:0002393;2.35e-08;6!CL:0002397;2.35e-08;6!CL:0000081;5.23e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.67e-68,177;CL:0000037,1.66e-67,168;CL:0002032,1.08e-64,161;CL:0000837,1.08e-64,161;CL:0000738,1.67e-53,136;CL:0000763,1.10e-45,108;CL:0000049,1.10e-45,108;CL:0002087,3.50e-44,115;CL:0002031,1.92e-38,120;CL:0000766,3.56e-30,72;CL:0002009,1.79e-26,61;CL:0002194,3.19e-26,59;CL:0000576,3.19e-26,59;CL:0000040,3.19e-26,59;CL:0000559,3.19e-26,59;CL:0000473,2.03e-24,48;CL:0000234,2.03e-24,48;CL:0000557,2.98e-24,67;CL:0000860,1.98e-22,42;CL:0002057,1.98e-22,42;CL:0000839,4.01e-22,66;CL:0000134,5.81e-20,354;CL:0002320,5.43e-19,361;CL:0000542,4.54e-16,53;CL:0000051,4.54e-16,53;CL:0000219,1.31e-15,386;CL:0000838,2.30e-15,52;CL:0000048,4.56e-13,427;CL:0000034,1.12e-12,441;CL:0000723,1.75e-12,433;CL:0000094,2.50e-09,8;CL:0000945,6.66e-09,24;CL:0000826,6.66e-09,24;CL:0000081,2.20e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-16;42!CL:0000049;1.51e-13;108!CL:0000051;2.15e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!1.36e-18!51;DOID:0060083!1.36e-18!51;DOID:1240!9.09e-14!39;DOID:8692!5.98e-10!31;DOID:0050686!8.46e-08!137;DOID:14566!4.25e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.52e-17;39!DOID:2531;1.81e-16;51!DOID:0060083;1.81e-16;51!DOID:8692;6.84e-15;31!DOID:0060058;9.02e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.75e-28,51;DOID:0060083,2.75e-28,51;DOID:1240,1.74e-22,39;DOID:8692,5.73e-16,31;DOID:0060058,5.95e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-25!102;UBERON:0003061!1.57e-25!102;UBERON:0002193!8.40e-22!112;UBERON:0002371!3.74e-18!80;UBERON:0001474!8.51e-18!86;UBERON:0002405!1.01e-14!115;UBERON:0004765!3.46e-13!101;UBERON:0001434!3.46e-13!101;UBERON:0002384!7.75e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.90e-29,98;UBERON:0003061,8.90e-29,98;UBERON:0002193,1.68e-25,108;UBERON:0002371,4.41e-21,76;UBERON:0002405,5.98e-20,93;UBERON:0001474,1.36e-18,82;UBERON:0002384,1.13e-17,371;UBERON:0004765,8.06e-16,90;UBERON:0001434,5.06e-13,100;UBERON:0003081,2.99e-08,203;UBERON:0000178,9.89e-07,15;UBERON:0000179,9.89e-07,15;UBERON:0000463,9.89e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0,0.376627918784408,3.89708369314551,3.9408282935974,3.30585281517453,2.75354993794233,1.91914699048606,2.94150634300544,0,0.30120591877825,0.369754010166788,4.26069603191659,3.41206157969812,0.587200878669695,4.9859586767869,4.01088894940283,2.82114131930607,0.895661896959697,0.647787332037959,0.257575567634187,1.16318591023652,1.13362783106643,2.91100873425379,0.929716147622738,3.70051099219643,0.929119112685311,2.01384674625505,4.09857130446561,3.54723344832878,0.689491361473237,0,0,1.31769637679823,2.45615535052061,1.34834090667051,2.14258724659632,1.28371610830437,0,3.29851300186716,4.18873681005427,4.68847225585964,0.870627715885752,1.13477044938228,1.24564449799115,3.01498398308092,3.65038042894141,3.04064382587163,1.21079900526674,4.05105399586321,1.58231193720442,1.47878700418359,1.4882300997553,1.25795187305026,0.561643155732475,0.300353785683013,1.44653028027372,0.855038231223746,0.59675003159727,0.182664153764634,0,1.09227722252426,1.77901850772711,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,1.31692042387539,0.590129310341499,0.786021525498329,0.822405995998037,0.501559486172034,0.977766799900771,0,0,1.22551502573691,1.17842362989935,1.32920336750173,0.541607727530031,1.28091319725675,1.1705341280389,0.986627427622057,0.276350017785848,1.44901542867526,0.593146252648242,0,0,2.49280553934646,1.53288197440768,1.71813722741315,0.506039384039006,1.59282707162048,0,0,0.752875595388864,0.895906278080929,0,0.236777252044017,2.46338399076314,2.41928091869679,3.7441627409691,1.44824403882799,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0.364295288292542,0,2.27183175558278,1.21890816109487,1.59549552622638,0.238490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,1.53316637465883,0,0,5.27121669744253,7.75560528296651,0,0.496971951695318,0,0.264818361626438,0,0,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0.149448680551801,0.469737994575059,0.323745888736263,0.421352420106746,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.505008341862199,0.625592599359821,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.545492241181669,0,0.121973706129595,0.530119073285941,0.348581828608555,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0.842923450390509,0.482022059766964,0.441175890929576,0.435758888184812,0.949082476444386,0.539325232640658,1.37355025587742,0.769494313892781,0,0,0.4115740113314,0,0,0,0.590789906681404,3.5317047953172,0.245976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,1.17002132569619,1.0404181360211,0,0,0.283550194484773,0,0.581267877027924,0,0.985326475791887,0.880484340132261,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0.871533458600294,0,0,2.00902836572851,2.10833939483032,0.239624855491583,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,1.45710687191585,0.591092280605782,1.94064817373566,2.05348858047597,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.347534457872331,0,0.343143423810856,1.86091223510599,2.37285620900479,0.853820462427555,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0.308419387605311,0.177561725313127,0.657017248110473,0,0.116210378459959,0.362578348774867,0,0.276242966807689,0,0,0,0,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0.784306353074702,0,0,0.325378394664303,0.618246069886334,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0,0,0.275673144969061,0,0,0.0852266274161009,0,0.495854746082934,0,0.382838137483752,0.30347334256665,1.85938219718914,0.62962469366128,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0.359744915166629,0.54907405947211,0.117812402345686,0,0,0,0,0.487426979262569,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.376575203107117,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.952927101831156,0.411362273086194,2.59389324477087,2.70015718619057,2.37937552888281,0.534120355637366,0.962479855263359,0.245040215981032,1.30062222588003,2.01976898167023,4.62421981764692,1.91311527274587,1.79621434289535,3.06408592211787,3.59845090630601,0.324621940274555,1.96558024679421,2.05411211129873,4.0736772900986,0,2.37008488922245,3.69352572738509,2.82519590067467,2.98092366383228,3.77855879231341,1.84344458585075,2.90778940260141,3.17013369252626,2.14926904942244,0.278406173895242,0,2.16364542780786,0.99921590399346,1.4098700508785,0.18714054040822,0.439524537815682,0.485442086998054,0.780103689942349,0.284136146806413,0.23874448473769,0.296964680832639,1.53580351049616,0,0.281338832821026,0.111308705022906,0.494411622680279,0,0.398495976502139,1.10513566212459,1.51159648712566,0.102268682502155,1.72318727645497,0.311039587661807,0.449341755736634,0,2.04628948090749,0.493217028184668,0,0,0,0.556608588971108,0,0,0.0874599999961957,0,0.1137934482855,0.762760950878299,0.709163045303809,0,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.663475559587348,0.886642856860642,0,0.32681539055697,0.139423744278603,0.153900517007594,0.113942055847001,0.922255617552241,0.628303510868405,0.434589487688032,2.87101043758728,0.274792780205587,0.533034776018635,3.06579894587209,0.31396051279005,1.66211681900156,0.902382642468723,2.15668787749514,1.67821586975843,0.189753732724185,0.476809736941136,0.210998064528027,0.652931232636591,0.282706142867882,0.216388639742091,0.995261931078505,0.176915129006678,0,3.55825354416746,3.70691816839509,3.55034628318548,0.337005664903385,0,0,1.82454789215666,0.19566461893209,0,0,0,0,0.379119477770928,0.60129367765797,0.829505531177977,0,0,0.627865836814451,0,0,0.693373365065693,0.520679215005393,0,0.522355239482415,0,0,0.774050650312681,0.950161122120412,1.47807822695777,0.193978032976839,0.529536760149002,0.225980740780532,0.274083849293502,0.596143835108969,0.126621591911757,0,0.160317640503067,0.426905989478705,0,0.432271251462318,0.458146384663663,0.171594997861965,0,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0.577901179803038,1.20084057741958,0.958337652243951,1.27746588066972,0,3.15464825135177,0.279282401272254,0,0,0.399358000997982,0,0,0.201550417460179,0.360299883542404,1.16495949527454,0.393915911536118,0.494495150286999,0.471824806979294,0.196854963029498,2.11683330164461,0,0.408610218334727,0.321506296930038,0.137539436597234,0,0.899895566206002,1.5476039091159,0.121499113316049,0.335434687599266,0.315222829196793,0.157363764404994,0.633602019116439,0,0.959575986597226,0,0,0,1.08599920350743,0,0.979762080328227,0,0.082092520749339,0.511164065356265,0.226624183040251,0.293104467356165,1.32506888912221,0.517131825446202,0.52893040697076,0.684347351537318,0,0.320362237703084,0.157204305099666,0,0.992332043623902,0.395223263795889,0.852548188666271,0,0,0,0,0,0.314108192500469,0.886068179966986,0.366078794705889,0.3755727921195,1.72022758707021,0.665574309221114,0.18628920882415,0.276697269872462,0.999843263696853,0.454947352624943,0.570930667089935,0,0.936669811613763,0.28984205722165,0,0,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.151230923763239,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0.521988583930423,0.226705925512272,0.694567422971502,0.489473409012935,0.179088841081487,0.308801447160972,0.219284049578707,0.176689145945881,0.38582807654183,0.675769762612291,1.28120759293973,0.345430341731199,0,0.276516872303462,1.16916185303633,1.32864840313363,1.79921933681429,0,0,0.211312123358627,1.59989916683944,0.853533837553127,1.54993481694734,0,0.552317850755522,0.279759015438889,1.24415452006595,0.511577485214607,0.107824811396682,0.157265941855896,0.327628914576042,0.169732529954025,0,0.123935764259002,0,0.318004350653419,2.60243758504136,0,0.352675943690684,0,0.321146125482298,1.41696576325585,0.478901577171454,0.41023272848151,0,0.138314504928436,0,1.42769420259154,0.196295437002051,0.353909170043221,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0,0.40341013740704,0,1.04762677792569,0.818859587550484,0.295712172434091,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0,0,0.127762427639595,1.07140367175657,1.3451348888753,0.606965604236632,0.682986574053893,0.620916591138472,2.99608367645026,0.342976018874837,1.01954599465248,0.0657727735628491,0.354581522651905,0.667388411352415,0.235479278551542,0.157115589916002,0,0,0.647782773655864,0,0.214429632529969,0.790068058663633,0.348724276104376,0.173858272302579,0,0,0,0,0,0.709992004383392,0.596493833314104,0.846774100381858,0.9164274741762,0.62041277132864,0,1.23040974977572,0.294450700845729,0.731507549893617,0,0.307988420568741,1.1598144313382,0,3.50909195193158,0.198950775161368,0.475680363110274,0.45178432815584,0.329821550236287,0.603851374266694,0.231522474323834,0,0.470317296361523,0.245148321753905,0,0.392616934229891,1.48523200163543,0,0.509781344063451,0.469919589899268,0.45120521581504,8.19517478584417,0,0,0.0802413666891683,0.730336388246517,0.458729283404541,0.143339583151451,0,0.407948941145488,0,0,0,0.462175628631418,1.73050624849516,0.252332849670158,0.437062287854782,0.253397002022874,0.203977659483963,1.06886962106224,0.36757959813938,0.50141507858475,0.606229585745915,0,0,0.413731983447581,0,0,0.645889098360061,1.1794195716213,0.560659312903067,0.318235791390825,0,0,0,1.01028079521881,0.286888821570705,0.332660356546013,0,0.320182037633146,0,0.359300808426348,0,0.488965776731466,0,0,0.402547587182052,2.24397944612263 | |||
|short_description=p6@RBPJ | |||
}} |
Revision as of 00:34, 22 January 2014
Short description: | p6@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RBPJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000342295, ENST00000345843, NM_005349, NM_203283, uc003grx.1, uc003gry.1_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | Q06330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.90e-29 | 98 |
blood island | 8.90e-29 | 98 |
hemolymphoid system | 1.68e-25 | 108 |
bone marrow | 4.41e-21 | 76 |
immune system | 5.98e-20 | 93 |
bone element | 1.36e-18 | 82 |
connective tissue | 1.13e-17 | 371 |
skeletal element | 8.06e-16 | 90 |
skeletal system | 5.06e-13 | 100 |
lateral plate mesoderm | 2.99e-08 | 203 |
blood | 9.89e-07 | 15 |
haemolymphatic fluid | 9.89e-07 | 15 |
organism substance | 9.89e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.75e-28 | 51 |
immune system cancer | 2.75e-28 | 51 |
leukemia | 1.74e-22 | 39 |
myeloid leukemia | 5.73e-16 | 31 |
lymphoma | 5.95e-07 | 10 |