FFCP PHASE1:Hg19::chr5:58335171..58335180,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |||
|association_with_transcript=158bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |||
|description=CAGE_peak_29_at_PDE4D_5end | |||
|id=chr5:58335171..58335180,- | |||
|ontology_enrichment_celltype=CL:0000791!4.65e-14!18;CL:0000789!4.65e-14!18;CL:0002420!4.65e-14!18;CL:0002419!4.65e-14!18;CL:0000790!4.65e-14!18;CL:0000084!5.47e-13!25;CL:0000827!5.47e-13!25;CL:0000625!1.75e-09!11;CL:0002087!2.92e-08!119;CL:0000738!5.33e-08!140;CL:0000988!4.76e-07!182;CL:0000037!7.67e-07!172;CL:0000566!7.67e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.39e-28;18!CL:0000789;6.39e-28;18!CL:0002419;6.39e-28;18!CL:0000084;1.03e-22;25!CL:0000625;4.57e-21;11!CL:0000623;6.62e-13;3!CL:0000767;7.86e-12;3!CL:0000624;2.50e-10;6!CL:0000542;2.44e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.07e-28,18;CL:0000789,7.07e-28,18;CL:0002420,7.07e-28,18;CL:0002419,7.07e-28,18;CL:0000790,7.07e-28,18;CL:0000084,1.28e-22,25;CL:0000827,1.28e-22,25;CL:0000625,4.19e-21,11;CL:0000838,5.56e-17,52;CL:0000542,1.39e-16,53;CL:0000051,1.39e-16,53;CL:0000623,6.69e-13,3;CL:0000825,6.69e-13,3;CL:0000767,3.62e-12,3;CL:0000738,4.47e-12,136;CL:0002087,2.16e-11,115;CL:0000037,1.67e-10,168;CL:0000624,2.99e-10,6;CL:0000988,1.21e-09,177;CL:0002032,2.91e-09,161;CL:0000837,2.91e-09,161;CL:0002031,1.51e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.39e-28;18!CL:0000051;2.44e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.39e-07!102;UBERON:0003061!9.39e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.24e-08;15!UBERON:0000179;2.24e-08;15!UBERON:0000463;2.24e-08;15!UBERON:0002390;1.26e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.67e-08,15;UBERON:0000179,1.67e-08,15;UBERON:0000463,1.67e-08,15 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,1.96682138424452,2.30297638858328,1.39334510984468,0,0,0,0,0,0.880801318004542,0.553995408531877,1.80490002723128,0.868043482863407,0.447830948479849,0,0.257575567634187,0.581592955118259,0,0,0.232429036905685,0,0.929119112685311,0.575384784644301,0.512321413058201,0,1.03423704220986,0,0,0.564727018627814,0.545812300115692,0.224723484445085,1.22433556948361,0,0,0.989553900560148,0.997318288108159,0.852449501065388,0.870627715885752,0,0,0.251248665256743,1.5644487552606,0.434377689410233,0,0.368277635987565,0,0,0.425208599930087,0,0.336985893439485,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,2.24203425192614,0,1.37696839079683,2.35806457649499,2.2616164889946,1.00311897234407,0.651844533267181,0.946895611469467,0,2.67385096524417,0.294605907474837,1.10766947291811,0,0.25618263945135,0.910415432919148,2.46656856905514,3.31620021343018,3.47763702882063,0.889719378972363,1.07016331235885,0,1.69964014046349,1.14966148080576,1.37450978193052,0.506039384039006,0.318565414324097,1.30216690771284,0.950452044448374,1.20460095262218,0.511946444617674,4.99722906209383,1.4206635122641,1.64225599384209,3.22570789159572,2.13952156626806,2.17236605824198,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0.538842688278752,0,0,0.576175924479999,0,0,1.1409436430889,0.298897361103602,0.587172493218824,0.485618833104395,0.561803226808994,0.408308342509787,0,0.413303124703062,0,0.247266929278557,0,0,0,0.375355559615893,0.554128230968366,0,0.612975591598039,1.50238058906597,0,0.538168907066586,0.213557388818567,0,0,0.412210116953756,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.784596007954691,2.36436912242313,3.23441362289276,3.08023287071396,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0.234282829985426,0,0,0,1.99267679560631,0.184369168541703,0.0868836144680828,0,0.343143423810856,1.24060815673732,0.215714200818617,2.13455115606889,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.164254312027618,1.03850885836724,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.231046011313244,1.56869953835371,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.38126038784765,0,0.855877976067841,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,0,1.42939065274673,0.411362273086194,0,1.62009431171434,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0.199579371432817,0.5745161103971,1.69338866179106,0.649243880549111,0.842391534340376,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0.780103689942349,0,0,0,0,0.994147647766298,0,0.445234820091624,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0.269605053441981,0.537063524026827,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0.216388639742091,0,0.353830258013357,0,0.593042257361244,0.247127877893006,0.522109747527277,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0.450970258243478,0,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0.213452994739353,0,0.1440904171541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| |||
|short_description=p29@PDE4D | |||
}} |
Revision as of 05:32, 22 January 2014
Short description: | p29@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.07e-28 | 18 |
alpha-beta T cell | 7.07e-28 | 18 |
immature T cell | 7.07e-28 | 18 |
mature T cell | 7.07e-28 | 18 |
immature alpha-beta T cell | 7.07e-28 | 18 |
T cell | 1.28e-22 | 25 |
pro-T cell | 1.28e-22 | 25 |
CD8-positive, alpha-beta T cell | 4.19e-21 | 11 |
lymphoid lineage restricted progenitor cell | 5.56e-17 | 52 |
lymphocyte | 1.39e-16 | 53 |
common lymphoid progenitor | 1.39e-16 | 53 |
natural killer cell | 6.69e-13 | 3 |
pro-NK cell | 6.69e-13 | 3 |
basophil | 3.62e-12 | 3 |
leukocyte | 4.47e-12 | 136 |
nongranular leukocyte | 2.16e-11 | 115 |
hematopoietic stem cell | 1.67e-10 | 168 |
CD4-positive, alpha-beta T cell | 2.99e-10 | 6 |
hematopoietic cell | 1.21e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.91e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 1.51e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.67e-08 | 15 |
haemolymphatic fluid | 1.67e-08 | 15 |
organism substance | 1.67e-08 | 15 |