FFCP PHASE1:Hg19::chr5:142784101..142784130,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503201_5end | |||
|description=CAGE_peak_4_at_NR3C1_5end | |||
|id=chr5:142784101..142784130,- | |||
|ontology_enrichment_celltype=CL:0000738!6.99e-13!140;CL:0000838!7.36e-11!52;CL:0002087!2.80e-10!119;CL:0000542!3.95e-10!53;CL:0000051!3.95e-10!53;CL:0002031!5.35e-10!124;CL:0000037!1.84e-08!172;CL:0000566!1.84e-08!172;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000988!5.87e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.22e-08;18!CL:0000789;2.22e-08;18!CL:0002419;2.22e-08;18!CL:0000542;7.27e-08;53!CL:0000236;2.16e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.36e-16,136;CL:0000838,2.20e-13,52;CL:0000542,8.02e-13,53;CL:0000051,8.02e-13,53;CL:0002087,1.40e-12,115;CL:0002031,1.05e-11,120;CL:0000037,3.55e-10,168;CL:0000988,1.40e-08,177;CL:0002032,1.77e-08,161;CL:0000837,1.77e-08,161;CL:0000791,3.70e-08,18;CL:0000789,3.70e-08,18;CL:0002420,3.70e-08,18;CL:0002419,3.70e-08,18;CL:0000790,3.70e-08,18;CL:0000236,1.35e-07,14;CL:0000945,3.44e-07,24;CL:0000826,3.44e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-08;18!CL:0000051;7.27e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.32e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-07;15!UBERON:0000179;1.93e-07;15!UBERON:0000463;1.93e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-07,114;UBERON:0000178,2.55e-07,15;UBERON:0000179,2.55e-07,15;UBERON:0000463,2.55e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,1.78784437770915,0,0,0.631719873426831,0.783556884599516,0.491467873003018,0.697801167972428,0.436882744260345,0.263766978228454,0.495065411840187,1.65698687863958,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,0,0.626909442956176,0.572471974262113,0.547497700291537,1.38096903554283,1.91033514369878,1.88831355734875,1.57421562627358,1.96682138424452,1.91914699048606,2.63187409637329,0,0.6024118375565,1.10926203050036,1.70427841276664,0.142169232487422,0,3.87796785972314,2.20598892217156,4.55722828503289,2.68698569087909,0.647787332037959,1.54545340580512,0.290796477559129,1.13362783106643,1.4555043671269,1.16214518452842,1.23350366406548,0.309706370895104,2.3015391385772,2.30544635876191,1.18241114944293,0,1.93645405075148,0,1.12945403725563,0.818718450173537,0.898893937780338,0.306083892370903,1.28371610830437,0.639337125799041,0,1.19678194572979,0.426224750532694,2.90209238628584,3.97169657283798,7.4738669879469,1.50749199154046,1.0429658368404,1.3031330682307,0,1.47311054395026,2.53169909952708,0.422510572623884,1.27562579979026,0,0.786300418025466,0.901061357049038,0.803627933485401,1.42506371870624,1.19350006319454,0.365328307529268,1.75996244461323,1.63841583378639,2.66852776159066,2.13365111283254,2.80277190925209,2.87376219977242,4.62731410949403,2.86216126360609,7.39976859842283,8.80855784056408,4.96955196562797,1.32171328579026,2.24203425192614,0.263384084775077,8.26181034478099,7.07419372948497,9.04646595597841,1.17030546773475,3.2592226663359,2.36723902867367,0,0.891283655081389,0.883817722424512,2.43687284041983,2.16643091012012,1.92136979588513,1.30059347559878,1.15106533222573,1.65810010671509,1.15921234294021,2.96573126324121,3.47803076516627,3.1360657141493,1.58633079776593,2.29932296161153,1.37450978193052,2.27717722817553,3.18565414324097,1.30216690771284,3.8018081777935,3.01150238155546,2.68771883424279,0,3.07810427657222,0,3.02410114837099,5.34880391567015,7.96534221355394,2.43806866313962,0,0.639312809217652,0,1.50401373190767,0.724232594804119,0,0.973269740605272,0.945348171640679,0,0.87834785693126,1.11332214173056,0,0,0,0,0.531831842075461,2.14641561874808,2.85997455390064,2.60020250930695,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0,0.550236083880135,0.417989933073621,1.29208379584664,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0.735326160691737,0.81014194788176,0.625098097988558,0.673588117878509,1.0135033243499,0,1.89853131913626,0.366403487860815,0,7.75560528296651,0,0.993943903390637,0.506522046658319,0.794455084879313,2.0078563452417,2.12801029319014,0,0,0.49333509683432,0.311211035399766,1.48181739276657,1.14423332179421,0.605429710579726,2.88087962239999,0.468642863667593,0.936480230490962,1.1409436430889,0.448346041655403,2.58355897016283,2.10434827678571,1.40450806702248,1.63323337003915,0.61417158655884,2.37649296704261,1.18800285728205,2.47266929278557,0,0,1.0100166837244,1.25118519871964,1.93944880838928,0.877955241761676,0.612975591598039,0.901428353439581,0.113432183160021,1.61450672119976,1.92201649936711,0.847727604638247,1.20036438433761,1.33968288009971,1.54584324027377,0.558350568994769,0.675105328965065,0.389748020644795,1.26216887122057,0.552299391853796,0.80823028409406,1.42003837006646,0.705264687593482,0.67824236924195,1.54608682530637,0.818238361772504,0.286804595389004,0.365921118388786,0.265059536642971,0.464775771478074,0.621966330092223,0.504641701751257,1.45990943630332,1.56449532329816,0,0,0.928735856063958,2.16563844500876,0.828147600278907,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0.674156540800822,0.392442930250692,0.769494313892781,0.738155454624648,0,0,0,0,0.982827216677626,1.77236972004421,1.32438929824395,0.860919069801795,0.343135620597051,0.439001141634502,1.1240175325762,0.904760751704678,1.75918045801206,0,0,0,0.927443239800615,0.469634776943287,0.144366447761074,0,0,0,0.858486162094873,2.70838706696137,0.234004265139238,2.22946743433092,0.93733833986777,0.671928512795438,0.708875486211932,2.4180801129769,1.74380363108377,1.53353071666084,0,1.05658120815871,5.39053100406007,6.19715799692934,4.16600030307054,0.507983154337352,0.763976851116555,1.17217447210047,3.4214489204541,0.925447434329912,0.600686115687835,0.285826432630578,0.784917590417525,0,0.66004457238855,0.387815147273333,0,2.535908257668,1.06375246633948,0,0.257207374262142,0,0.266422179016099,1.57275793023962,1.08524321078289,0,2.28015329005615,0.710783897485092,0.791951872933429,0.301439377059586,0,0.299918973546171,2.43247561282381,0.502257091432126,0,0,1.14861935834114,1.42636905040718,0.434343920002738,1.64381058040307,0.537182889719687,3.58672460779287,6.5020150866636,6.46882724578552,6.93052395910641,0,0,0,0,0,8.98808428736619,2.99161459204025,7.87389475528467,1.96306386750624,0.500170521059677,1.08506009479894,1.03985430765404,0.713715955188647,0.788512075169673,1.40569697991256,0.601892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| |||
|short_description=p4@NR3C1 | |||
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Revision as of 08:02, 22 January 2014
Short description: | p4@NR3C1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503201_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.36e-16 | 136 |
lymphoid lineage restricted progenitor cell | 2.20e-13 | 52 |
lymphocyte | 8.02e-13 | 53 |
common lymphoid progenitor | 8.02e-13 | 53 |
nongranular leukocyte | 1.40e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-11 | 120 |
hematopoietic stem cell | 3.55e-10 | 168 |
hematopoietic cell | 1.40e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-08 | 161 |
mature alpha-beta T cell | 3.70e-08 | 18 |
alpha-beta T cell | 3.70e-08 | 18 |
immature T cell | 3.70e-08 | 18 |
mature T cell | 3.70e-08 | 18 |
immature alpha-beta T cell | 3.70e-08 | 18 |
B cell | 1.35e-07 | 14 |
lymphocyte of B lineage | 3.44e-07 | 24 |
pro-B cell | 3.44e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-07 | 114 |
blood | 2.55e-07 | 15 |
haemolymphatic fluid | 2.55e-07 | 15 |
organism substance | 2.55e-07 | 15 |