FFCP PHASE1:Hg19::chr6:30655011..30655029,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29413 | |||
|TSSclassifier=strong | |||
|UniProt=Q6NYC8 | |||
|association_with_transcript=-18bp_to_ENST00000399199_5end | |||
|description=CAGE_peak_7_at_PPP1R18_5end | |||
|id=chr6:30655011..30655029,- | |||
|ontology_enrichment_celltype=CL:0002371!6.75e-16!591;CL:0000144!8.66e-15!625;CL:0000548!5.31e-13!679;CL:0000004!5.31e-13!679;CL:0000255!5.31e-13!679;CL:0000012!2.77e-12!682;CL:0002057!8.65e-09!42;CL:0000003!2.80e-08!722;CL:0000860!2.58e-07!45;CL:0000220!3.87e-07!246;CL:0002321!8.78e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.31e-10;33!CL:0002057;1.31e-10;33!CL:0000473;1.02e-08;39!CL:0000234;1.02e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.67e-09,42;CL:0002057,5.67e-09,42;CL:0000473,1.17e-08,48;CL:0000234,1.17e-08,48;CL:0002321,6.41e-07,250;CL:0000766,6.74e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.12e-11!216;UBERON:0000926!1.00e-08!448;UBERON:0004120!1.00e-08!448;UBERON:0006603!1.00e-08!448;UBERON:0002204!1.18e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.74e-12,315;UBERON:0004120,1.74e-12,315;UBERON:0006603,1.74e-12,315;UBERON:0003081,3.79e-10,203;UBERON:0002204,2.71e-09,167 | |||
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| |||
|short_description=p7@PPP1R18 | |||
}} |
Revision as of 10:52, 22 January 2014
Short description: | p7@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000399199_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | Q6NYC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.67e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.67e-09 | 42 |
defensive cell | 1.17e-08 | 48 |
phagocyte | 1.17e-08 | 48 |
embryonic cell | 6.41e-07 | 250 |
myeloid leukocyte | 6.74e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.74e-12 | 315 |
mesoderm-derived structure | 1.74e-12 | 315 |
presumptive mesoderm | 1.74e-12 | 315 |
lateral plate mesoderm | 3.79e-10 | 203 |
musculoskeletal system | 2.71e-09 | 167 |