FFCP PHASE1:Hg19::chr6:31238972..31238985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4933 | |||
|TSSclassifier=strong | |||
|UniProt=Q14838 | |||
|association_with_transcript=0bp_to_M12679_5end | |||
|coexpression_cluster_id=C641 | |||
|description=CAGE_peak_12_at_HLA-C_5end | |||
|id=chr6:31238972..31238985,- | |||
|ontology_enrichment_celltype=CL:0002057!1.84e-14!42;CL:0000766!2.77e-13!76;CL:0000860!6.14e-13!45;CL:0002009!1.28e-11!65;CL:0000738!2.50e-11!140;CL:0002194!3.22e-11!63;CL:0000576!3.22e-11!63;CL:0000040!3.22e-11!63;CL:0000559!3.22e-11!63;CL:0000557!8.18e-11!71;CL:0000839!3.85e-10!70;CL:0000763!1.05e-09!112;CL:0000049!1.05e-09!112;CL:0002032!4.54e-08!165;CL:0000837!4.54e-08!165;CL:0002087!5.55e-08!119;CL:0002031!6.88e-08!124;CL:0000037!1.06e-07!172;CL:0000566!1.06e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-22;39!CL:0000234;1.01e-22;39!CL:0000860;8.35e-22;33!CL:0002057;8.35e-22;33!CL:0000766;4.87e-14;69!CL:0000576;7.13e-12;48!CL:0000775;1.28e-10;3!CL:0000763;9.30e-10;100!CL:0000094;1.34e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.10e-23,48;CL:0000234,2.10e-23,48;CL:0000766,1.76e-22,72;CL:0000763,2.24e-20,108;CL:0000049,2.24e-20,108;CL:0000860,2.30e-19,42;CL:0002057,2.30e-19,42;CL:0002194,3.10e-18,59;CL:0000576,3.10e-18,59;CL:0000040,3.10e-18,59;CL:0000559,3.10e-18,59;CL:0002009,1.44e-17,61;CL:0000839,4.49e-16,66;CL:0000557,8.40e-16,67;CL:0000738,1.07e-13,136;CL:0002032,1.63e-12,161;CL:0000837,1.63e-12,161;CL:0000037,7.60e-12,168;CL:0000988,4.63e-11,177;CL:0000775,1.34e-10,3;CL:0000094,1.45e-08,8;CL:0002087,2.95e-08,115;CL:0002031,8.12e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-16;42!CL:0000049;1.07e-08;108!UBERON:0000358;1.47e-08;1!UBERON:0008801;2.64e-08;1!UBERON:0005754;2.64e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.29e-09!86;UBERON:0002371!1.48e-08!80;UBERON:0002193!1.12e-07!112;UBERON:0004765!1.26e-07!101;UBERON:0001434!1.26e-07!101;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102;UBERON:0002405!3.88e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.64e-08;1!UBERON:0000998;2.64e-08;1!UBERON:0006868;2.64e-08;1!UBERON:0001567;2.64e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-13,76;UBERON:0001474,1.67e-12,82;UBERON:0004765,3.44e-11,90;UBERON:0002405,9.35e-11,93;UBERON:0002390,4.34e-10,98;UBERON:0003061,4.34e-10,98;UBERON:0001434,7.67e-10,100;UBERON:0002193,6.09e-09,108;UBERON:0000998,2.13e-08,1;UBERON:0006868,2.13e-08,1;UBERON:0001831,3.79e-08,1;UBERON:0001567,3.79e-08,1;UBERON:0008801,3.79e-08,1;UBERON:0003081,4.94e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,7.85150489409649,0.377875943688809,0,8.59987436551033,1.23350366406548,0,6.61692502340946,0.768482119587302,0,5.86067657252252,0.645484683583826,0,12.9887214284397,0.272906150057846,0,10.4068523406107,0,0,4.61791820261403,0.997318288108159,0,10.447532590629,0.56738522469114,0,9.79869794501299,0,0,11.502590550034,0.736555271975129,0,0.211255286311942,0.637812899895131,0,0,0.300353785683013,0,0.570025487482497,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.822405995998037,0.167186495390678,0.651844533267181,0.946895611469467,0,0.445641827540694,0,0.443067789167242,0,0.640456598628376,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0,0,0,0,0,0.383959833463255,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,1.7308685049499,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0.423863802319124,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925971025153221,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0.985326475791887,0,0,0,0,0,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,0,2.07207756718018,0,0,0,0,0.178428988797162,0.315404830067869,0,0,4.5481500811197,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,1.26377536871694,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,1.71752672377882,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.873633341210151,0,0,0,0,0,0.176512253383001,0,0,0.397429223405979,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,1.7537427795545,0.930053882193542,1.14495775979091,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.231522474323834,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0.281951753939561,0,0.199882311849858,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,1.20764276154616,0 | |||
|short_description=p12@HLA-C | |||
}} |
Revision as of 10:57, 22 January 2014
Short description: | p12@HLA-C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HLA-C_5end |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | 0bp_to_M12679_5end |
EntrezGene: | HLA-C |
HGNC: | 4933 |
UniProt: | Q14838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.10e-23 | 48 |
phagocyte | 2.10e-23 | 48 |
myeloid leukocyte | 1.76e-22 | 72 |
myeloid cell | 2.24e-20 | 108 |
common myeloid progenitor | 2.24e-20 | 108 |
classical monocyte | 2.30e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.30e-19 | 42 |
monopoietic cell | 3.10e-18 | 59 |
monocyte | 3.10e-18 | 59 |
monoblast | 3.10e-18 | 59 |
promonocyte | 3.10e-18 | 59 |
macrophage dendritic cell progenitor | 1.44e-17 | 61 |
myeloid lineage restricted progenitor cell | 4.49e-16 | 66 |
granulocyte monocyte progenitor cell | 8.40e-16 | 67 |
leukocyte | 1.07e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.63e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-12 | 161 |
hematopoietic stem cell | 7.60e-12 | 168 |
hematopoietic cell | 4.63e-11 | 177 |
neutrophil | 1.34e-10 | 3 |
granulocyte | 1.45e-08 | 8 |
nongranular leukocyte | 2.95e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.12e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-13 | 76 |
bone element | 1.67e-12 | 82 |
skeletal element | 3.44e-11 | 90 |
immune system | 9.35e-11 | 93 |
hematopoietic system | 4.34e-10 | 98 |
blood island | 4.34e-10 | 98 |
skeletal system | 7.67e-10 | 100 |
hemolymphoid system | 6.09e-09 | 108 |
seminal vesicle | 2.13e-08 | 1 |
seminal fluid secreting gland | 2.13e-08 | 1 |
parotid gland | 3.79e-08 | 1 |
cheek | 3.79e-08 | 1 |
parotid gland primordium | 3.79e-08 | 1 |
lateral plate mesoderm | 4.94e-08 | 203 |