FFCP PHASE1:Hg19::chr6:118228365..118228376,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21483 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T1Q4 | |||
|association_with_transcript=-312bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_SLC35F1_5end | |||
|id=chr6:118228365..118228376,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.03e-10!5;CL:0000047!9.07e-10!8;CL:0002319!2.47e-09!25;CL:0000540!4.07e-09!6;CL:0000031!4.07e-09!6;CL:0000404!4.07e-09!6;CL:0002605!3.94e-08!3;CL:0000133!5.78e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.22e-17;3!CL:0000128;1.16e-07;7!CL:0000126;1.16e-07;7!CL:0000127;1.16e-07;7!CL:0002319;6.16e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.70e-17,3;CL:0000128,8.91e-08,7;CL:0000126,8.91e-08,7;CL:0000127,8.91e-08,7;CL:0002453,8.91e-08,7;CL:0002319,5.31e-07,25;CL:0000047,6.05e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.73e-73!86;UBERON:0001017!7.73e-72!82;UBERON:0000073!9.33e-70!94;UBERON:0001016!9.33e-70!94;UBERON:0001049!5.16e-62!57;UBERON:0005068!5.16e-62!57;UBERON:0006241!5.16e-62!57;UBERON:0007135!5.16e-62!57;UBERON:0001893!6.39e-57!34;UBERON:0002780!1.78e-55!41;UBERON:0001890!1.78e-55!41;UBERON:0006240!1.78e-55!41;UBERON:0002791!9.54e-55!33;UBERON:0003080!6.22e-54!42;UBERON:0000955!6.33e-54!69;UBERON:0006238!6.33e-54!69;UBERON:0001869!1.59e-53!32;UBERON:0002020!3.25e-53!34;UBERON:0003528!3.25e-53!34;UBERON:0003075!2.00e-52!86;UBERON:0007284!2.00e-52!86;UBERON:0002616!1.30e-50!59;UBERON:0002346!1.81e-49!90;UBERON:0000956!1.59e-47!25;UBERON:0000203!1.59e-47!25;UBERON:0003056!9.16e-44!61;UBERON:0002619!5.38e-41!22;UBERON:0007023!4.57e-38!115;UBERON:0001950!2.60e-37!20;UBERON:0004121!2.75e-36!169;UBERON:0000924!4.55e-35!173;UBERON:0006601!4.55e-35!173;UBERON:0000033!2.38e-32!123;UBERON:0000153!8.23e-32!129;UBERON:0007811!8.23e-32!129;UBERON:0000200!1.03e-14!6;UBERON:0001871!7.35e-14!7;UBERON:0001872!3.27e-12!5;UBERON:0000025!3.95e-12!194;UBERON:0002420!3.19e-11!9;UBERON:0007245!3.19e-11!9;UBERON:0010009!3.19e-11!9;UBERON:0010011!3.19e-11!9;UBERON:0000454!3.19e-11!9;UBERON:0000349!4.59e-11!5;UBERON:0003076!5.30e-10!15;UBERON:0003057!5.30e-10!15;UBERON:0000064!6.58e-10!219;UBERON:0004111!3.40e-09!241;UBERON:0000475!1.05e-08!365;UBERON:0000922!2.35e-08!612;UBERON:0002308!2.55e-08!9;UBERON:0000125!2.55e-08!9;UBERON:0002021!3.78e-08!5;UBERON:0002771!4.85e-08!3;UBERON:0009663!1.23e-07!7;UBERON:0000477!1.92e-07!286;UBERON:0002240!2.06e-07!3;UBERON:0000483!4.47e-07!309;UBERON:0000119!6.82e-07!312;UBERON:0000468!8.71e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;8.38e-59;25!UBERON:0000203;8.38e-59;25!UBERON:0001869;8.59e-55;32!UBERON:0001893;1.19e-51;34!UBERON:0003528;3.36e-51;34!UBERON:0002020;3.36e-51;34!UBERON:0002791;4.44e-51;32!UBERON:0001950;8.52e-50;20!UBERON:0002619;3.26e-45;22!UBERON:0002780;2.25e-35;41!UBERON:0001890;2.25e-35;41!UBERON:0000200;8.08e-34;6!UBERON:0000955;8.74e-28;68!UBERON:0001017;9.56e-26;75!UBERON:0000073;1.84e-25;53!UBERON:0002616;1.84e-25;53!UBERON:0001870;1.31e-17;3!UBERON:0001016;2.37e-17;83!UBERON:0001871;4.43e-13;6!UBERON:0002771;1.86e-12;2!UBERON:0002702;1.86e-12;2!UBERON:0001872;5.23e-11;5!UBERON:0002021;7.97e-11;5!UBERON:0005383;2.50e-08;3!UBERON:0005382;2.50e-08;3!UBERON:0011216;4.45e-08;132!UBERON:0002581;2.89e-07;1!UBERON:0002902;7.34e-07;1!UBERON:0002022;7.34e-07;1!UBERON:0001874;7.34e-07;1!UBERON:0003112;7.34e-07;1!UBERON:0011158;7.34e-07;1!UBERON:0009899;7.34e-07;1!UBERON:0007190;7.34e-07;1!UBERON:0003128;7.34e-07;1!UBERON:0001703;7.34e-07;1!UBERON:0002241;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.78e-63,32;UBERON:0001893,1.33e-59,34;UBERON:0003528,1.89e-59,34;UBERON:0002020,1.89e-59,34;UBERON:0000956,6.71e-59,25;UBERON:0000203,6.71e-59,25;UBERON:0002791,4.26e-57,32;UBERON:0001017,6.69e-55,81;UBERON:0002780,5.28e-54,41;UBERON:0001890,5.28e-54,41;UBERON:0003080,5.28e-54,41;UBERON:0006240,5.28e-54,41;UBERON:0001950,1.04e-49,20;UBERON:0001016,5.80e-49,89;UBERON:0001049,1.08e-46,56;UBERON:0005068,1.08e-46,56;UBERON:0006241,1.08e-46,56;UBERON:0007135,1.08e-46,56;UBERON:0000073,3.86e-45,53;UBERON:0002616,3.86e-45,53;UBERON:0002619,3.91e-45,22;UBERON:0000955,9.42e-45,68;UBERON:0006238,9.42e-45,68;UBERON:0003056,8.25e-39,61;UBERON:0003075,1.59e-33,82;UBERON:0007284,1.59e-33,82;UBERON:0000200,1.62e-33,6;UBERON:0002346,9.46e-32,86;UBERON:0010371,1.95e-25,104;UBERON:0004121,5.34e-25,171;UBERON:0000924,5.34e-25,171;UBERON:0006601,5.34e-25,171;UBERON:0010314,6.27e-21,132;UBERON:0011216,2.61e-19,223;UBERON:0001870,7.28e-18,3;UBERON:0007023,1.68e-13,114;UBERON:0001871,9.74e-13,6;UBERON:0002702,2.22e-12,2;UBERON:0002771,3.31e-12,2;UBERON:0001872,4.67e-11,5;UBERON:0002021,6.78e-11,5;UBERON:0000025,2.39e-10,192;UBERON:0005383,4.35e-08,3;UBERON:0005382,4.35e-08,3;UBERON:0004111,2.44e-07,240;UBERON:0002581,3.17e-07,1;UBERON:0002902,4.25e-07,1;UBERON:0009899,4.25e-07,1;UBERON:0003112,4.51e-07,1;UBERON:0011158,4.51e-07,1;UBERON:0003128,4.51e-07,1;UBERON:0001703,4.51e-07,1;UBERON:0002241,4.51e-07,1;UBERON:0004761,4.51e-07,1;UBERON:0009617,4.51e-07,1;UBERON:0007190,6.38e-07,1;UBERON:0002022,6.76e-07,1;UBERON:0001874,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,1.43117993565528,1.64249310087461,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04913549066956,0,0,1.17261385734044,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.76259386507517,5.98841394003583,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,1.08536794762867,0,0.221158519862449,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,1.96263467463224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0.275078873194468,0.415440338029185,0,0,1.45798935979259,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.92863035764712,1.251909307065,0,0.221858103073705,0.620964029413834,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.957803154342908,1.23069818544453,3.52900374710405,1.79808856406967,1.77623210195036,0,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0,0,1.55336444622308,0.781078098613847,0.826747186004736,1.71222687523548,2.18789923607288,0,0.496211178389294,0,0,1.07140367175657,0,0,0,0,0,0,0.543757863814654,2.17050152757402,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0.285906176706625,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,1.2679671827502,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,1.15585533324555,3.9271562130634,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0,0,0,0,0.103432995861895,0,1.1903221573187,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SLC35F1 | |||
}} |
Revision as of 13:35, 22 January 2014
Short description: | p5@SLC35F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC35F1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -312bp_to_ENST00000360388, NM_001029858, uc003pxx.3_5end |
EntrezGene: | SLC35F1 |
HGNC: | 21483 |
UniProt: | Q5T1Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.70e-17 | 3 |
oligodendrocyte | 8.91e-08 | 7 |
macroglial cell | 8.91e-08 | 7 |
astrocyte | 8.91e-08 | 7 |
oligodendrocyte precursor cell | 8.91e-08 | 7 |
neural cell | 5.31e-07 | 25 |
neuronal stem cell | 6.05e-07 | 8 |