FFCP PHASE1:Hg19::chr7:7606605..7606629,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21905 | |||
|TSSclassifier=strong | |||
|UniProt=C9JAQ1,Q9NXC5 | |||
|association_with_transcript=0bp_to_ENST00000456533,NM_019005,uc003srf.2_5end | |||
|description=CAGE_peak_3_at_MIOS_5end | |||
|id=chr7:7606605..7606629,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.85e-18!63;CL:0000576!1.85e-18!63;CL:0000040!1.85e-18!63;CL:0000559!1.85e-18!63;CL:0000766!6.31e-18!76;CL:0002057!7.66e-18!42;CL:0002009!2.43e-17!65;CL:0000557!3.75e-17!71;CL:0000839!6.19e-17!70;CL:0000860!1.27e-16!45;CL:0002087!3.39e-13!119;CL:0000738!1.38e-11!140;CL:0002031!2.14e-11!124;CL:0000763!4.29e-10!112;CL:0000049!4.29e-10!112;CL:0000037!5.59e-09!172;CL:0000566!5.59e-09!172;CL:0002032!1.67e-08!165;CL:0000837!1.67e-08!165;CL:0000945!8.78e-08!24;CL:0000826!8.78e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.30e-12;39!CL:0000234;1.30e-12;39!CL:0000576;1.31e-12;48!CL:0000860;1.95e-12;33!CL:0002057;1.95e-12;33!CL:0000766;4.68e-09;69!CL:0000945;3.84e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.47e-21,48;CL:0000234,8.47e-21,48;CL:0002194,1.10e-20,59;CL:0000576,1.10e-20,59;CL:0000040,1.10e-20,59;CL:0000559,1.10e-20,59;CL:0000766,9.61e-20,72;CL:0002009,1.37e-19,61;CL:0000557,2.99e-19,67;CL:0000839,1.04e-18,66;CL:0000860,5.41e-18,42;CL:0002057,5.41e-18,42;CL:0002087,5.85e-14,115;CL:0000738,4.31e-12,136;CL:0002031,4.59e-12,120;CL:0000763,1.42e-10,108;CL:0000049,1.42e-10,108;CL:0000037,3.70e-09,168;CL:0002032,1.36e-08,161;CL:0000837,1.36e-08,161;CL:0000945,6.37e-08,24;CL:0000826,6.37e-08,24;CL:0000988,5.93e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.35e-18!86;UBERON:0002371!1.92e-18!80;UBERON:0004765!1.16e-16!101;UBERON:0001434!1.16e-16!101;UBERON:0002405!1.04e-12!115;UBERON:0002390!5.40e-12!102;UBERON:0003061!5.40e-12!102;UBERON:0002193!1.60e-10!112;UBERON:0002204!4.41e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.52e-21,82;UBERON:0002371,1.10e-20,76;UBERON:0004765,7.28e-20,90;UBERON:0001434,1.25e-18,100;UBERON:0002405,1.60e-15,93;UBERON:0002390,1.82e-13,98;UBERON:0003061,1.82e-13,98;UBERON:0002193,1.12e-11,108;UBERON:0002204,1.32e-08,167 | |||
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| |||
|short_description=p3@MIOS | |||
}} |
Revision as of 15:39, 22 January 2014
Short description: | p3@MIOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIOS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456533, NM_019005, uc003srf.2_5end |
EntrezGene: | MIOS |
HGNC: | 21905 |
UniProt: | C9JAQ1Q9NXC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.47e-21 | 48 |
phagocyte | 8.47e-21 | 48 |
monopoietic cell | 1.10e-20 | 59 |
monocyte | 1.10e-20 | 59 |
monoblast | 1.10e-20 | 59 |
promonocyte | 1.10e-20 | 59 |
myeloid leukocyte | 9.61e-20 | 72 |
macrophage dendritic cell progenitor | 1.37e-19 | 61 |
granulocyte monocyte progenitor cell | 2.99e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.04e-18 | 66 |
classical monocyte | 5.41e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-18 | 42 |
nongranular leukocyte | 5.85e-14 | 115 |
leukocyte | 4.31e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.59e-12 | 120 |
myeloid cell | 1.42e-10 | 108 |
common myeloid progenitor | 1.42e-10 | 108 |
hematopoietic stem cell | 3.70e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.36e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-08 | 161 |
lymphocyte of B lineage | 6.37e-08 | 24 |
pro-B cell | 6.37e-08 | 24 |
hematopoietic cell | 5.93e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.52e-21 | 82 |
bone marrow | 1.10e-20 | 76 |
skeletal element | 7.28e-20 | 90 |
skeletal system | 1.25e-18 | 100 |
immune system | 1.60e-15 | 93 |
hematopoietic system | 1.82e-13 | 98 |
blood island | 1.82e-13 | 98 |
hemolymphoid system | 1.12e-11 | 108 |
musculoskeletal system | 1.32e-08 | 167 |