FFCP PHASE1:Hg19::chr7:92157760..92157854,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8850 | |||
|TSSclassifier=strong | |||
|UniProt=O43933 | |||
|association_with_transcript=0bp_to_ENST00000248633,NM_000466,uc003uly.2,uc010ley.2,uc011khr.1,uc011khs.1_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_1_at_PEX1_5end | |||
|id=chr7:92157760..92157854,- | |||
|ontology_enrichment_celltype=CL:0000542!9.85e-11!53;CL:0000051!9.85e-11!53;CL:0000838!2.55e-10!52;CL:0000084!3.12e-08!25;CL:0000827!3.12e-08!25;CL:0000791!4.41e-08!18;CL:0000789!4.41e-08!18;CL:0002420!4.41e-08!18;CL:0002419!4.41e-08!18;CL:0000790!4.41e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.81e-08;25!CL:0000791;4.70e-08;18!CL:0000789;4.70e-08;18!CL:0002419;4.70e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.85e-11,53;CL:0000051,9.85e-11,53;CL:0000838,2.55e-10,52;CL:0000084,3.12e-08,25;CL:0000827,3.12e-08,25;CL:0000791,4.41e-08,18;CL:0000789,4.41e-08,18;CL:0002420,4.41e-08,18;CL:0002419,4.41e-08,18;CL:0000790,4.41e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.70e-08;18!UBERON:0006601;1.32e-07;82 | |||
|ontology_enrichment_disease=DOID:0050687!6.51e-11!143;DOID:162!7.84e-11!235;DOID:14566!6.79e-10!239;DOID:305!1.78e-07!106;DOID:0050686!9.11e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.73e-07;22!DOID:2994;9.73e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.51e-11,143;DOID:162,7.84e-11,235;DOID:14566,6.79e-10,239;DOID:305,1.78e-07,106;DOID:0050686,9.11e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-18!115;UBERON:0000073!2.74e-12!94;UBERON:0001016!2.74e-12!94;UBERON:0005743!4.66e-11!86;UBERON:0001049!4.87e-11!57;UBERON:0005068!4.87e-11!57;UBERON:0006241!4.87e-11!57;UBERON:0007135!4.87e-11!57;UBERON:0001017!4.89e-11!82;UBERON:0002780!6.53e-11!41;UBERON:0001890!6.53e-11!41;UBERON:0006240!6.53e-11!41;UBERON:0003080!5.47e-10!42;UBERON:0000955!3.84e-09!69;UBERON:0006238!3.84e-09!69;UBERON:0001893!7.56e-09!34;UBERON:0002346!1.22e-08!90;UBERON:0002791!1.59e-08!33;UBERON:0002616!1.71e-08!59;UBERON:0002020!1.79e-08!34;UBERON:0003528!1.79e-08!34;UBERON:0000924!5.43e-08!173;UBERON:0006601!5.43e-08!173;UBERON:0001869!5.49e-08!32;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0004121!4.10e-07!169;UBERON:0000153!6.29e-07!129;UBERON:0007811!6.29e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.27e-08;41!UBERON:0001890;3.27e-08;41!UBERON:0001893;1.39e-07;34!UBERON:0002791;2.13e-07;32!UBERON:0003528;2.43e-07;34!UBERON:0002020;2.43e-07;34!UBERON:0001869;2.89e-07;32!UBERON:0000073;3.19e-07;53!UBERON:0002616;3.19e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.21e-18,114;UBERON:0001016,6.14e-13,89;UBERON:0001049,7.33e-12,56;UBERON:0005068,7.33e-12,56;UBERON:0006241,7.33e-12,56;UBERON:0007135,7.33e-12,56;UBERON:0001017,1.06e-11,81;UBERON:0000073,4.00e-11,53;UBERON:0002616,4.00e-11,53;UBERON:0002780,6.53e-11,41;UBERON:0001890,6.53e-11,41;UBERON:0003080,6.53e-11,41;UBERON:0006240,6.53e-11,41;UBERON:0011216,6.98e-11,223;UBERON:0000955,8.65e-10,68;UBERON:0006238,8.65e-10,68;UBERON:0001893,7.56e-09,34;UBERON:0003528,1.79e-08,34;UBERON:0002020,1.79e-08,34;UBERON:0002346,2.00e-08,86;UBERON:0002791,4.16e-08,32;UBERON:0001869,5.49e-08,32;UBERON:0004121,1.11e-07,171;UBERON:0000924,1.11e-07,171;UBERON:0006601,1.11e-07,171;UBERON:0003075,2.50e-07,82;UBERON:0007284,2.50e-07,82 | |||
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| |||
|short_description=p1@PEX1 | |||
}} |
Revision as of 17:50, 22 January 2014
Short description: | p1@PEX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PEX1_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_ENST00000248633, NM_000466, uc003uly.2, uc010ley.2, uc011khr.1, uc011khs.1_5end |
EntrezGene: | PEX1 |
HGNC: | 8850 |
UniProt: | O43933 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.85e-11 | 53 |
common lymphoid progenitor | 9.85e-11 | 53 |
lymphoid lineage restricted progenitor cell | 2.55e-10 | 52 |
T cell | 3.12e-08 | 25 |
pro-T cell | 3.12e-08 | 25 |
mature alpha-beta T cell | 4.41e-08 | 18 |
alpha-beta T cell | 4.41e-08 | 18 |
immature T cell | 4.41e-08 | 18 |
mature T cell | 4.41e-08 | 18 |
immature alpha-beta T cell | 4.41e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.21e-18 | 114 |
nervous system | 6.14e-13 | 89 |
neural tube | 7.33e-12 | 56 |
neural rod | 7.33e-12 | 56 |
future spinal cord | 7.33e-12 | 56 |
neural keel | 7.33e-12 | 56 |
central nervous system | 1.06e-11 | 81 |
regional part of nervous system | 4.00e-11 | 53 |
regional part of brain | 4.00e-11 | 53 |
regional part of forebrain | 6.53e-11 | 41 |
forebrain | 6.53e-11 | 41 |
anterior neural tube | 6.53e-11 | 41 |
future forebrain | 6.53e-11 | 41 |
organ system subdivision | 6.98e-11 | 223 |
brain | 8.65e-10 | 68 |
future brain | 8.65e-10 | 68 |
telencephalon | 7.56e-09 | 34 |
brain grey matter | 1.79e-08 | 34 |
gray matter | 1.79e-08 | 34 |
neurectoderm | 2.00e-08 | 86 |
regional part of telencephalon | 4.16e-08 | 32 |
cerebral hemisphere | 5.49e-08 | 32 |
ectoderm-derived structure | 1.11e-07 | 171 |
ectoderm | 1.11e-07 | 171 |
presumptive ectoderm | 1.11e-07 | 171 |
neural plate | 2.50e-07 | 82 |
presumptive neural plate | 2.50e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.51e-11 | 143 |
cancer | 7.84e-11 | 235 |
disease of cellular proliferation | 6.79e-10 | 239 |
carcinoma | 1.78e-07 | 106 |
organ system cancer | 9.11e-07 | 137 |