FFCP PHASE1:Hg19::chr8:16612970..16613003,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:16612970..16613003,- | |||
|id=chr8:16612970..16613003,- | |||
|ontology_enrichment_celltype=CL:0000055!9.36e-13!180;CL:0000680!3.49e-12!57;CL:0000056!3.49e-12!57;CL:0000355!3.49e-12!57;CL:0000183!1.31e-10!59;CL:0000187!3.67e-10!54;CL:0000192!1.26e-09!42;CL:0000514!1.26e-09!42;CL:0000222!3.71e-09!119;CL:0000393!3.70e-08!60;CL:0000211!3.70e-08!60;CL:0000057!6.94e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002504;2.38e-10;3!CL:1000279;2.38e-10;3!CL:1000280;2.38e-10;3!CL:0002622;3.94e-10;3!CL:0000515;7.10e-10;3!CL:0002552;8.52e-10;5!CL:0002564;2.06e-09;3!CL:0000056;1.71e-07;4!CL:0002598;2.77e-07;2!CL:0002602;2.77e-07;2!CL:0002600;7.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,2.75e-10,3;CL:1000279,2.75e-10,3;CL:1000280,2.75e-10,3;CL:0002622,3.96e-10,3;CL:0002552,5.51e-10,5;CL:0002564,3.74e-09,3;CL:0000680,3.89e-08,58;CL:0000056,3.89e-08,58;CL:0000355,3.89e-08,58;CL:0000192,1.73e-07,43;CL:0000514,1.73e-07,43;CL:0000515,1.77e-07,4;CL:0002602,2.14e-07,2;CL:0002598,2.91e-07,2;CL:0002600,8.57e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;1.71e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.39e-14!83;UBERON:0002329!7.39e-14!83;UBERON:0003077!7.39e-14!83;UBERON:0003059!7.39e-14!83;UBERON:0007282!7.39e-14!83;UBERON:0009618!7.39e-14!83;UBERON:0007285!7.39e-14!83;UBERON:0002385!3.03e-13!63;UBERON:0001015!3.03e-13!63;UBERON:0000383!3.03e-13!63;UBERON:0001134!3.63e-12!61;UBERON:0002036!3.63e-12!61;UBERON:0003082!3.63e-12!61;UBERON:0005256!5.89e-12!143;UBERON:0004290!3.27e-11!70;UBERON:0002100!2.61e-09!216;UBERON:0000486!2.48e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;5.25e-15;5!UBERON:0002216;5.25e-15;5!UBERON:0011134;5.25e-15;5!UBERON:0002209;5.25e-15;5!UBERON:0002213;5.25e-15;5!UBERON:0007844;5.25e-15;5!UBERON:0011138;5.25e-15;5!UBERON:0001130;5.25e-15;5!UBERON:0001066;5.25e-15;5!UBERON:0001468;5.25e-15;5!UBERON:0002242;2.06e-09;3!UBERON:0004905;3.07e-09;8!UBERON:0000982;3.07e-09;8!UBERON:0004770;3.07e-09;8!UBERON:0006444;2.77e-07;2!UBERON:0001995;2.77e-07;2!UBERON:0004715;2.77e-07;2!UBERON:0002367;8.19e-07;11!UBERON:0010147;8.19e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.52e-15,5;UBERON:0002216,7.52e-15,5;UBERON:0011134,7.52e-15,5;UBERON:0002209,7.52e-15,5;UBERON:0002213,7.52e-15,5;UBERON:0005856,7.52e-15,5;UBERON:0005866,7.52e-15,5;UBERON:0005863,7.52e-15,5;UBERON:0007844,7.52e-15,5;UBERON:0011138,7.52e-15,5;UBERON:0001130,7.52e-15,5;UBERON:0001066,7.52e-15,5;UBERON:0001468,7.52e-15,5;UBERON:0002242,3.74e-09,3;UBERON:0003068,3.74e-09,3;UBERON:0002328,3.74e-09,3;UBERON:0004880,3.74e-09,3;UBERON:0004905,3.81e-09,8;UBERON:0000982,3.81e-09,8;UBERON:0004770,3.81e-09,8;UBERON:0002385,3.10e-08,64;UBERON:0001015,3.10e-08,64;UBERON:0000383,3.10e-08,64;UBERON:0003104,4.32e-08,160;UBERON:0009142,4.32e-08,160;UBERON:0006444,2.14e-07,2;UBERON:0001995,2.14e-07,2;UBERON:0004715,2.14e-07,2;UBERON:0001134,2.15e-07,62;UBERON:0002036,2.15e-07,62;UBERON:0003082,2.15e-07,62;UBERON:0000162,3.58e-07,14;UBERON:0001353,3.58e-07,14;UBERON:0000163,3.58e-07,14;UBERON:0006866,3.58e-07,14;UBERON:0000164,3.58e-07,14;UBERON:0000931,3.58e-07,14;UBERON:0002367,8.21e-07,11;UBERON:0010147,8.21e-07,11;UBERON:0009846,8.21e-07,11;UBERON:0003353,8.21e-07,11;UBERON:0004902,8.21e-07,11;UBERON:0003820,8.21e-07,11;UBERON:0009847,8.21e-07,11 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,4.45558870656168,2.65117900582333,0,0,0,0.975865597581014,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55050055501597,3.20189636418039,2.00832367658802,0,0.760272105718513,0,0.367663080345869,0,1.25019619597712,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0.993943903390637,0.12663051166458,2.38336525463794,0.573673241497627,0,0,1.06748995729705,0.24666754841716,1.55605517699883,0.538842688278752,0.653847612453835,0.454072282934794,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,3.67477508258808,1.59684612505298,2.37649296704261,2.37600571456411,0.494533858557114,0,0,0.841680569770331,0.625592599359821,1.38532057742091,0.438977620880838,0,0.600952235626387,0,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.22001485746285,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.771622122786426,0,0.532844358032199,0.428933980974443,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,2.02693829334611,2.87666851570537,3.04403637507822,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.08575535922538,1.00034104211935,2.17012018959788,1.03985430765404,0,0.315404830067869,0.117141414992713,1.80567659836631,0,0,0,0.737476674166813,0.260650843404249,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.768834895534206,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,1.03850885836724,0.348631135379878,0,0,0,2.18147451512753,4.18809686415449,3.54035920390445,0.451199612907412,0.847168708148562,0,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0,0.322260734604821,0.290033387828457,0.426133137080504,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0.429374660225974,1.48863347743867,4.42931194606216,0.953150969619124,2.04718233049067,4.70732886837312,0,0,10.4326025398323,4.11805544604082,2.12062324222236,0.202182481573316,0,0,1.46290121726877,0,0,0.818999468447914,5.09059555033366,0,0,0.66343897524122,0.876901770507525,1.15755106853338,3.27947376023316,0.811641507850816,1.239293992399,0.563391205064483,0.430234056612155,0,0.7133421029625,0.354761064070598,0.211107635297664,0,0.379473173765715,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,5.90975216557434,0,0,0,1.08507746200627,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0.227884111694002,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0.432777279484182,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0.484945082442097,0,0,0,0.19871461170299,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,6.35691297783342,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,1.81253126788156,0.734364233889974,0,0,0,0,0,0.25426853765475,2.17199840701485,0.864221491201268,1.63293680054705,0,0,1.5334921960688,0,0,0,0,0,0,0,0.427149650270779,5.18774206828898,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,1.25783950876288,0.889811221596536,2.51724075236616,0.302461847526478,0.932623203496683,3.69637874974085,0.318593534327405,3.59842489730884,1.08684069813382,0.829412415681711,0.53168342911599,0,0.751288044986092,0,0,0,0.537052785212442,0.464033759878494,1.59238355479446,2.00013882331577,0,0.336749488765919,11.3566408405786,0,1.07220795687463,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,1.1531308121143,0,1.71488009437418,0,0.131545547125698,0,0,1.41287567130925,0,0,0,0,0.47775168788705,0,0,2.32482850736251,0,4.008556823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| |||
|short_description=p@chr8:16612970..16613003,- | |||
}} |
Revision as of 20:48, 22 January 2014
Short description: | p@chr8:16612970..16613003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:16612970..16613003, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 2.75e-10 | 3 |
smooth muscle cell of large intestine | 2.75e-10 | 3 |
smooth muscle cell of colon | 2.75e-10 | 3 |
prostate stromal cell | 3.96e-10 | 3 |
fibroblast of gingiva | 5.51e-10 | 5 |
nucleus pulposus cell of intervertebral disc | 3.74e-09 | 3 |
muscle precursor cell | 3.89e-08 | 58 |
myoblast | 3.89e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.89e-08 | 58 |
smooth muscle cell | 1.73e-07 | 43 |
smooth muscle myoblast | 1.73e-07 | 43 |
skeletal muscle myoblast | 1.77e-07 | 4 |
annulus pulposus cell | 2.14e-07 | 2 |
bronchial smooth muscle cell | 2.91e-07 | 2 |
smooth muscle cell of trachea | 8.57e-07 | 2 |