FFCP PHASE1:Hg19::chr8:70571897..70571914,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C637 | |||
|description=CAGE_peak_at_chr8:70571897..70571914,+ | |||
|id=chr8:70571897..70571914,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.13e-11!180;CL:0000057!5.13e-11!75;CL:0002620!1.76e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.75e-14;3!CL:0002593;5.81e-10;2!CL:0002334;1.08e-09;12!CL:0000153;1.01e-08;9!CL:0000447;1.01e-08;9!CL:0002595;1.21e-08;5!CL:0000138;6.28e-08;6!CL:0000327;1.09e-07;15!CL:0000197;1.48e-07;6!CL:0000098;1.48e-07;6!CL:0002167;1.48e-07;6!CL:0002579;1.54e-07;3!CL:0000151;5.33e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.68e-14,3;CL:0002593,8.03e-10,2;CL:0002334,9.82e-10,12;CL:0000153,1.32e-08,9;CL:0000447,1.32e-08,9;CL:0002595,1.54e-08,5;CL:0000058,6.37e-08,6;CL:0000138,6.37e-08,6;CL:0000197,1.33e-07,6;CL:0000098,1.33e-07,6;CL:0002167,1.33e-07,6;CL:0002579,1.34e-07,3;CL:0000327,1.55e-07,15;CL:0000057,1.91e-07,76;CL:0000151,4.18e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;2.30e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,3.68e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.20e-10!6;UBERON:0002358!3.20e-10!6;UBERON:0003684!3.20e-10!6;UBERON:0001178!3.20e-10!6;UBERON:0004457!1.18e-09!12;UBERON:0000042!1.18e-09!12;UBERON:0002097!2.02e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.81e-10;2!UBERON:0003834;1.21e-08;5!UBERON:0001533;1.21e-08;5!UBERON:0004457;1.50e-08;9!UBERON:0000042;1.50e-08;9!UBERON:0003688;9.95e-08;6!UBERON:0002358;9.95e-08;6!UBERON:0003684;9.95e-08;6!UBERON:0001178;9.95e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,8.03e-10,2;UBERON:0003834,1.54e-08,5;UBERON:0001533,1.54e-08,5;UBERON:0003688,1.24e-07,6;UBERON:0002358,1.24e-07,6;UBERON:0003684,1.24e-07,6;UBERON:0001178,1.24e-07,6 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,2.53007406669196,2.50668955317945,3.91085601194224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.567160915800105,0.538168907066586,0.427114777637135,0.211931901159562,0.600182192168805,0,1.28820270022815,1.11670113798954,1.85653965465393,1.16924406193438,0.252433774244115,0.184099797284599,2.58633690910099,1.77504796258307,0.10075209822764,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,0,2.6593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,5.8231841228626,1.60586089917446,1.57702415033935,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,1.38115775959256,2.24528075546459,0.768834895534206,3.07024349440022,2.89537058058494,0,0,0,0,0,0,0,0,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0,0,1.85938219718914,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,1.70599442741899,1.05650146756755,0.409499734223957,0.424216295861138,1.13008116620243,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0.354761064070598,1.05553817648832,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.57979048707425,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0,0,0,0.681552087141687,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,2.12673371646396,1.5652351854352,0.751288044986092,0.380805212168795,0.813741466409323,0,0.214821114084977,0,1.19428766609585,0,0.686791410365586,0.336749488765919,0,0,2.35885750512418,0,0.680117776536817,0.231522474323834,0,0.537266523244462,0,0.877136198314828,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,1.8374728641192,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,4.19520305013884,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:70571897..70571914,+ | |||
}} |
Revision as of 22:27, 22 January 2014
Short description: | p@chr8:70571897..70571914, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:70571897..70571914, + |
Coexpression cluster: | C637_osteoclastoma_Fibroblast_Preadipocyte_Chondrocyte_spindle_hepatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.68e-14 | 3 |
smooth muscle cell of the internal thoracic artery | 8.03e-10 | 2 |
preadipocyte | 9.82e-10 | 12 |
GAG secreting cell | 1.32e-08 | 9 |
carbohydrate secreting cell | 1.32e-08 | 9 |
smooth muscle cell of the subclavian artery | 1.54e-08 | 5 |
chondroblast | 6.37e-08 | 6 |
chondrocyte | 6.37e-08 | 6 |
receptor cell | 1.33e-07 | 6 |
sensory epithelial cell | 1.33e-07 | 6 |
olfactory epithelial cell | 1.33e-07 | 6 |
omentum preadipocyte | 1.34e-07 | 3 |
extracellular matrix secreting cell | 1.55e-07 | 15 |
fibroblast | 1.91e-07 | 76 |
secretory cell | 4.18e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 8.03e-10 | 2 |
thoracic segment blood vessel | 1.54e-08 | 5 |
subclavian artery | 1.54e-08 | 5 |
omentum | 1.24e-07 | 6 |
peritoneum | 1.24e-07 | 6 |
abdominal cavity | 1.24e-07 | 6 |
visceral peritoneum | 1.24e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.68e-10 | 2 |