FFCP PHASE1:Hg19::chr22:19701958..19701969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5413 | |EntrezGene=entrezgene:5413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9164 | |HGNC=HGNC:9164 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q99719 | |UniProt=uniprot:Q99719 | ||
|association_with_transcript=-17bp_to_ENST00000455784,NM_002688,uc002zpv.1_5end | |association_with_transcript=-17bp_to_ENST00000455784,NM_002688,uc002zpv.1_5end | ||
|cluster_id=chr22:19701958..19701969,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_5_at_SEPT5_5end | |description=CAGE_peak_5_at_SEPT5_5end | ||
Revision as of 19:08, 28 July 2015
| Short description: | p5@SEPT5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SEPT5_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | -17bp_to_ENST00000455784, NM_002688, uc002zpv.1_5end |
| EntrezGene: | 5413 |
| HGNC: | 9164 |
| UniProt: | Q99719 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@SEPT5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 3.45e-10 | 8 |
| neuron | 2.87e-08 | 6 |
| neuroblast | 2.87e-08 | 6 |
| electrically signaling cell | 2.87e-08 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebral hemisphere | 2.01e-54 | 32 |
| telencephalon | 4.79e-51 | 34 |
| regional part of cerebral cortex | 7.61e-51 | 22 |
| regional part of telencephalon | 3.74e-49 | 32 |
| neocortex | 3.80e-49 | 20 |
| central nervous system | 2.77e-46 | 81 |
| regional part of forebrain | 2.89e-46 | 41 |
| forebrain | 2.89e-46 | 41 |
| anterior neural tube | 2.89e-46 | 41 |
| future forebrain | 2.89e-46 | 41 |
Showing 1 to 10 of 49 entries
