FFCP PHASE1:Hg19::chr2:217237176..217237246,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57574 | |EntrezGene=entrezgene:57574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29269 | |HGNC=HGNC:29269 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9P2E8 | |UniProt=uniprot:Q9P2E8 | ||
|association_with_transcript=-426bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | |association_with_transcript=-426bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | ||
|cluster_id=chr2:217237176..217237246,- | |||
|description=CAGE_peak_2_at_MARCH4_5end | |description=CAGE_peak_2_at_MARCH4_5end | ||
|id=chr2:217237176..217237246,- | |id=chr2:217237176..217237246,- | ||
Revision as of 06:23, 29 July 2015
| Short description: | p2@MARCH4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_MARCH4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -426bp_to_ENST00000273067, NM_020814, uc002vgb.2_5end |
| EntrezGene: | 57574 |
| HGNC: | 29269 |
| UniProt: | Q9P2E8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@MARCH4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 3.70e-21 | 76 |
| mesodermal cell | 2.40e-12 | 121 |
| lining cell | 3.12e-12 | 58 |
| barrier cell | 3.12e-12 | 58 |
| skin fibroblast | 4.55e-11 | 23 |
| mesothelial cell | 3.48e-07 | 19 |
| squamous epithelial cell | 4.68e-07 | 63 |
| meso-epithelial cell | 4.72e-07 | 45 |
| endothelial cell | 5.99e-07 | 36 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| tube | 6.16e-17 | 192 |
| cell layer | 6.14e-16 | 309 |
| epithelium | 2.76e-15 | 306 |
| regional part of forebrain | 2.38e-14 | 41 |
| forebrain | 2.38e-14 | 41 |
| anterior neural tube | 2.38e-14 | 41 |
| future forebrain | 2.38e-14 | 41 |
| anatomical conduit | 4.60e-14 | 240 |
| nervous system | 4.85e-14 | 89 |
| neural tube | 7.81e-14 | 56 |
Showing 1 to 10 of 55 entries
