FFCP PHASE1:Mm9::chr10:106316061..106316068,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=408|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:106316061..106316068,+|id=chr10:106316061..106316068,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.84e-19!71;UBERON:0003075!4.84e-19!71;UBERON:0007284!4.84e-19!71;UBERON:0000033!1.15e-14!63;UBERON:0003056!3.57e-14!49;UBERON:0004121!3.52e-13!102;UBERON:0000924!3.52e-13!102;UBERON:0006601!3.52e-13!102;UBERON:0000955!4.57e-11!50;UBERON:0006238!4.57e-11!50;UBERON:0001049!5.83e-11!52;UBERON:0005068!5.83e-11!52;UBERON:0006241!5.83e-11!52;UBERON:0007135!5.83e-11!52;UBERON:0002616!3.55e-10!49;UBERON:0007811!2.06e-09!86;UBERON:0003080!5.05e-09!40;UBERON:0000956!6.85e-09!21;UBERON:0001869!6.85e-09!21;UBERON:0000203!6.85e-09!21;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002780!2.64e-08!39;UBERON:0001890!2.64e-08!39;UBERON:0006240!2.64e-08!39;UBERON:0001017!5.31e-08!73;UBERON:0005743!5.31e-08!73;UBERON:0000153!8.50e-08!94;UBERON:0000073!1.42e-07!75;UBERON:0001016!1.42e-07!75;UBERON:0002020!1.76e-07!34;UBERON:0002791!2.28e-07!29;UBERON:0003528!2.28e-07!29;UBERON:0001893!2.28e-07!29;UBERON:0000970!3.84e-07!9;UBERON:0000019!3.84e-07!9;UBERON:0000047!3.84e-07!9;UBERON:0004088!3.84e-07!9;UBERON:0002104!3.84e-07!9;UBERON:0001456!3.84e-07!9;UBERON:0003072!3.84e-07!9;UBERON:0003071!3.84e-07!9;UBERON:0004128!3.84e-07!9;UBERON:0002619!6.28e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.17e-13,49;UBERON:0000970,1.43e-12,9;UBERON:0000019,1.43e-12,9;UBERON:0000047,1.43e-12,9;UBERON:0010312,1.43e-12,9;UBERON:0004088,1.43e-12,9;UBERON:0002104,1.43e-12,9;UBERON:0001456,1.43e-12,9;UBERON:0003072,1.43e-12,9;UBERON:0004128,1.43e-12,9;UBERON:0003071,1.43e-12,9;UBERON:0002346,9.66e-12,64;UBERON:0003075,9.66e-12,64;UBERON:0007284,9.66e-12,64;UBERON:0002021,3.11e-11,10;UBERON:0000411,3.11e-11,10;UBERON:0001950,3.11e-11,10;UBERON:0001444,2.48e-10,11;UBERON:0010371,3.74e-10,73;UBERON:0002619,5.20e-10,17;UBERON:0000020,1.72e-09,12;UBERON:0001032,1.72e-09,12;UBERON:0004456,1.72e-09,12;UBERON:0004121,3.71e-09,95;UBERON:0000924,3.71e-09,95;UBERON:0006601,3.71e-09,95;UBERON:0000033,8.88e-09,13;UBERON:0005085,8.88e-09,13;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0001851,3.50e-08,1;UBERON:0005889,3.50e-08,1;UBERON:0000956,4.29e-08,21;UBERON:0001869,4.29e-08,21;UBERON:0000203,4.29e-08,21;UBERON:0010314,8.25e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.299581278809645,0,0.376963056338593,0.695297280769106,1.53429274398198,0,0.811206315338788,0,0,0,0.210441855886474,0,0.229902104433473,0,1.50704817835715,1.56483948048054,2.3060469651273,1.49922759295566,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0.841159794256509,1.44066457330998,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,1.07021290561242,0.658196082408484,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,2.57779773515531,0.685082519770642,0,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.715308569841963,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr10:106316061..106316068,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=408 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:106316061..106316068,+ | |||
|description=CAGE_peak_at_chr10:106316061..106316068,+ | |||
|id=chr10:106316061..106316068,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.84e-19!71;UBERON:0003075!4.84e-19!71;UBERON:0007284!4.84e-19!71;UBERON:0000033!1.15e-14!63;UBERON:0003056!3.57e-14!49;UBERON:0004121!3.52e-13!102;UBERON:0000924!3.52e-13!102;UBERON:0006601!3.52e-13!102;UBERON:0000955!4.57e-11!50;UBERON:0006238!4.57e-11!50;UBERON:0001049!5.83e-11!52;UBERON:0005068!5.83e-11!52;UBERON:0006241!5.83e-11!52;UBERON:0007135!5.83e-11!52;UBERON:0002616!3.55e-10!49;UBERON:0007811!2.06e-09!86;UBERON:0003080!5.05e-09!40;UBERON:0000956!6.85e-09!21;UBERON:0001869!6.85e-09!21;UBERON:0000203!6.85e-09!21;UBERON:0002021!1.35e-08!10;UBERON:0000411!1.35e-08!10;UBERON:0001950!1.35e-08!10;UBERON:0002780!2.64e-08!39;UBERON:0001890!2.64e-08!39;UBERON:0006240!2.64e-08!39;UBERON:0001017!5.31e-08!73;UBERON:0005743!5.31e-08!73;UBERON:0000153!8.50e-08!94;UBERON:0000073!1.42e-07!75;UBERON:0001016!1.42e-07!75;UBERON:0002020!1.76e-07!34;UBERON:0002791!2.28e-07!29;UBERON:0003528!2.28e-07!29;UBERON:0001893!2.28e-07!29;UBERON:0000970!3.84e-07!9;UBERON:0000019!3.84e-07!9;UBERON:0000047!3.84e-07!9;UBERON:0004088!3.84e-07!9;UBERON:0002104!3.84e-07!9;UBERON:0001456!3.84e-07!9;UBERON:0003072!3.84e-07!9;UBERON:0003071!3.84e-07!9;UBERON:0004128!3.84e-07!9;UBERON:0002619!6.28e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.17e-13,49;UBERON:0000970,1.43e-12,9;UBERON:0000019,1.43e-12,9;UBERON:0000047,1.43e-12,9;UBERON:0010312,1.43e-12,9;UBERON:0004088,1.43e-12,9;UBERON:0002104,1.43e-12,9;UBERON:0001456,1.43e-12,9;UBERON:0003072,1.43e-12,9;UBERON:0004128,1.43e-12,9;UBERON:0003071,1.43e-12,9;UBERON:0002346,9.66e-12,64;UBERON:0003075,9.66e-12,64;UBERON:0007284,9.66e-12,64;UBERON:0002021,3.11e-11,10;UBERON:0000411,3.11e-11,10;UBERON:0001950,3.11e-11,10;UBERON:0001444,2.48e-10,11;UBERON:0010371,3.74e-10,73;UBERON:0002619,5.20e-10,17;UBERON:0000020,1.72e-09,12;UBERON:0001032,1.72e-09,12;UBERON:0004456,1.72e-09,12;UBERON:0004121,3.71e-09,95;UBERON:0000924,3.71e-09,95;UBERON:0006601,3.71e-09,95;UBERON:0000033,8.88e-09,13;UBERON:0005085,8.88e-09,13;UBERON:0000955,1.66e-08,47;UBERON:0006238,1.66e-08,47;UBERON:0001851,3.50e-08,1;UBERON:0005889,3.50e-08,1;UBERON:0000956,4.29e-08,21;UBERON:0001869,4.29e-08,21;UBERON:0000203,4.29e-08,21;UBERON:0010314,8.25e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,0.299581278809645,0,0.376963056338593,0.695297280769106,1.53429274398198,0,0.811206315338788,0,0,0,0.210441855886474,0,0.229902104433473,0,1.50704817835715,1.56483948048054,2.3060469651273,1.49922759295566,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0.841159794256509,1.44066457330998,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,1.07021290561242,0.658196082408484,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,1.38097570952153,0.572895513439397,2.57779773515531,0.685082519770642,0,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0.715308569841963,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:106316061..106316068,+ | |||
}} |
Latest revision as of 19:59, 3 August 2015
Short description: | p@chr10:106316061..106316068, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:106316061..106316068, + |
Coexpression cluster: | MCL_coexpression_mm9:408 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 6.17e-13 | 49 |
eye | 1.43e-12 | 9 |
camera-type eye | 1.43e-12 | 9 |
simple eye | 1.43e-12 | 9 |
immature eye | 1.43e-12 | 9 |
ocular region | 1.43e-12 | 9 |
visual system | 1.43e-12 | 9 |
face | 1.43e-12 | 9 |
optic cup | 1.43e-12 | 9 |
optic vesicle | 1.43e-12 | 9 |
eye primordium | 1.43e-12 | 9 |
neurectoderm | 9.66e-12 | 64 |
neural plate | 9.66e-12 | 64 |
presumptive neural plate | 9.66e-12 | 64 |
occipital lobe | 3.11e-11 | 10 |
visual cortex | 3.11e-11 | 10 |
neocortex | 3.11e-11 | 10 |
subdivision of head | 2.48e-10 | 11 |
ecto-epithelium | 3.74e-10 | 73 |
regional part of cerebral cortex | 5.20e-10 | 17 |
sense organ | 1.72e-09 | 12 |
sensory system | 1.72e-09 | 12 |
entire sense organ system | 1.72e-09 | 12 |
ectoderm-derived structure | 3.71e-09 | 95 |
ectoderm | 3.71e-09 | 95 |
presumptive ectoderm | 3.71e-09 | 95 |
head | 8.88e-09 | 13 |
ectodermal placode | 8.88e-09 | 13 |
brain | 1.66e-08 | 47 |
future brain | 1.66e-08 | 47 |
cortex | 3.50e-08 | 1 |
zygote cortex | 3.50e-08 | 1 |
cerebral cortex | 4.29e-08 | 21 |
cerebral hemisphere | 4.29e-08 | 21 |
pallium | 4.29e-08 | 21 |
structure with developmental contribution from neural crest | 8.25e-08 | 92 |