FFCP PHASE1:Mm9::chr11:70246054..70246059,+: Difference between revisions
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{{FFCP|EntrezGene=216869|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-77bp_to_ENSMUST00000124112_5end|description=CAGE_peak_6_at_Arrb2_5end|id=chr11:70246054..70246059,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,2.68e-14,2;CL:0000764,8.39e-10,3;CL:0000765,8.39e-10,3;CL:0000038,8.39e-10,3;CL:0000547,8.39e-10,3;CL:0000839,1.78e-08,13;CL:0000213,1.05e-07,1;CL:0002078,1.05e-07,1;CL:0000115,1.05e-07,1;CL:0002262,1.05e-07,1;CL:1000398,1.05e-07,1;CL:0002194,1.33e-07,4;CL:0000766,1.33e-07,4;CL:0000234,1.33e-07,4;CL:0000576,1.33e-07,4;CL:0000235,1.33e-07,4;CL:0000864,1.33e-07,4;CL:0002009,1.33e-07,4;CL:0000040,1.33e-07,4;CL:0000559,1.33e-07,4;CL:0000355,1.53e-07,9;CL:0000763,6.30e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,2.17e-28,6;DOID:0060100,1.78e-21,3;DOID:4045,1.78e-21,3;DOID:2531,8.39e-10,3;DOID:0060083,8.39e-10,3;DOID:1240,8.39e-10,3|ontology_enrichment_uberon=UBERON:0002405!4.36e-07!70;UBERON:0002390!8.31e-07!45;UBERON:0003061!8.31e-07!45;UBERON:0002371!8.99e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.52e-10,32;UBERON:0002394,1.05e-07,1;UBERON:0001281,1.05e-07,1;UBERON:0000353,1.05e-07,1;UBERON:0003497,1.05e-07,1;UBERON:0003909,1.05e-07,1;UBERON:0003928,1.05e-07,1;UBERON:0003835,1.05e-07,1;UBERON:0003513,1.05e-07,1;UBERON:0001280,1.05e-07,1;UBERON:0004647,1.05e-07,1;UBERON:0002294,1.05e-07,1;UBERON:0001173,1.05e-07,1;UBERON:0004912,1.05e-07,1;UBERON:0005171,1.05e-07,1;UBERON:0001134,1.53e-07,9;UBERON:0002036,1.53e-07,9;UBERON:0002385,1.53e-07,9;UBERON:0000486,1.53e-07,9;UBERON:0007503,1.53e-07,9;UBERON:0001015,1.53e-07,9;UBERON:0002329,1.53e-07,9;UBERON:0003082,1.53e-07,9;UBERON:0003059,1.53e-07,9;UBERON:0007282,1.53e-07,9;UBERON:0004290,1.53e-07,9;UBERON:0009618,1.53e-07,9;UBERON:0000383,7.76e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0,0.946386496074713,0.548457734422955,0.42438965179803,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,8.78916424547506,3.906676722619,9.42342739152837,5.88231488031014,9.56263678941824,11.6522484727477,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,3.5524005747305,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0.304465478312141,0,0,0,0.125666591329675,0.247194967734374,0,1.76922110389975,0,0.441683036920787,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0,0,4.52373851817817,1.63171705145613,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0.441056796109924,0,0,0.180938774784468,0,0,0,0.18542530201051,0.683483523191411,0.619160603889667,0.185194527369712,0.565105371014073,0.546776910884101,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0.299033092087958,0,0.583353565032143,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0,0.116876902181569,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p6@Arrb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216869 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-77bp_to_ENSMUST00000124112_5end | |||
|cluster_id=chr11:70246054..70246059,+ | |||
|description=CAGE_peak_6_at_Arrb2_5end | |||
|id=chr11:70246054..70246059,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.68e-14,2;CL:0000764,8.39e-10,3;CL:0000765,8.39e-10,3;CL:0000038,8.39e-10,3;CL:0000547,8.39e-10,3;CL:0000839,1.78e-08,13;CL:0000213,1.05e-07,1;CL:0002078,1.05e-07,1;CL:0000115,1.05e-07,1;CL:0002262,1.05e-07,1;CL:1000398,1.05e-07,1;CL:0002194,1.33e-07,4;CL:0000766,1.33e-07,4;CL:0000234,1.33e-07,4;CL:0000576,1.33e-07,4;CL:0000235,1.33e-07,4;CL:0000864,1.33e-07,4;CL:0002009,1.33e-07,4;CL:0000040,1.33e-07,4;CL:0000559,1.33e-07,4;CL:0000355,1.53e-07,9;CL:0000763,6.30e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.17e-28,6;DOID:0060100,1.78e-21,3;DOID:4045,1.78e-21,3;DOID:2531,8.39e-10,3;DOID:0060083,8.39e-10,3;DOID:1240,8.39e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!4.36e-07!70;UBERON:0002390!8.31e-07!45;UBERON:0003061!8.31e-07!45;UBERON:0002371!8.99e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.52e-10,32;UBERON:0002394,1.05e-07,1;UBERON:0001281,1.05e-07,1;UBERON:0000353,1.05e-07,1;UBERON:0003497,1.05e-07,1;UBERON:0003909,1.05e-07,1;UBERON:0003928,1.05e-07,1;UBERON:0003835,1.05e-07,1;UBERON:0003513,1.05e-07,1;UBERON:0001280,1.05e-07,1;UBERON:0004647,1.05e-07,1;UBERON:0002294,1.05e-07,1;UBERON:0001173,1.05e-07,1;UBERON:0004912,1.05e-07,1;UBERON:0005171,1.05e-07,1;UBERON:0001134,1.53e-07,9;UBERON:0002036,1.53e-07,9;UBERON:0002385,1.53e-07,9;UBERON:0000486,1.53e-07,9;UBERON:0007503,1.53e-07,9;UBERON:0001015,1.53e-07,9;UBERON:0002329,1.53e-07,9;UBERON:0003082,1.53e-07,9;UBERON:0003059,1.53e-07,9;UBERON:0007282,1.53e-07,9;UBERON:0004290,1.53e-07,9;UBERON:0009618,1.53e-07,9;UBERON:0000383,7.76e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.437102012094987,0.333109761815663,0.202475267389826,0,0.946386496074713,0.548457734422955,0.42438965179803,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,8.78916424547506,3.906676722619,9.42342739152837,5.88231488031014,9.56263678941824,11.6522484727477,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,3.5524005747305,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0.304465478312141,0,0,0,0.125666591329675,0.247194967734374,0,1.76922110389975,0,0.441683036920787,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0,0.746441823660558,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0,0,4.52373851817817,1.63171705145613,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0,0,0,0,0.441056796109924,0,0,0.180938774784468,0,0,0,0.18542530201051,0.683483523191411,0.619160603889667,0.185194527369712,0.565105371014073,0.546776910884101,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0.299033092087958,0,0.583353565032143,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0.38983152295901,0,0.116876902181569,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Arrb2 | |||
}} |
Revision as of 20:59, 3 August 2015
Short description: | p6@Arrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -77bp_to_ENSMUST00000124112_5end |
EntrezGene: | 216869 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.68e-14 | 2 |
erythroid lineage cell | 8.39e-10 | 3 |
erythroblast | 8.39e-10 | 3 |
erythroid progenitor cell | 8.39e-10 | 3 |
proerythroblast | 8.39e-10 | 3 |
myeloid lineage restricted progenitor cell | 1.78e-08 | 13 |
lining cell | 1.05e-07 | 1 |
meso-epithelial cell | 1.05e-07 | 1 |
endothelial cell | 1.05e-07 | 1 |
endothelial cell of sinusoid | 1.05e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.05e-07 | 1 |
monopoietic cell | 1.33e-07 | 4 |
myeloid leukocyte | 1.33e-07 | 4 |
phagocyte | 1.33e-07 | 4 |
monocyte | 1.33e-07 | 4 |
macrophage | 1.33e-07 | 4 |
tissue-resident macrophage | 1.33e-07 | 4 |
macrophage dendritic cell progenitor | 1.33e-07 | 4 |
monoblast | 1.33e-07 | 4 |
promonocyte | 1.33e-07 | 4 |
multi-potent skeletal muscle stem cell | 1.53e-07 | 9 |
myeloid cell | 6.30e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.52e-10 | 32 |
bile duct | 1.05e-07 | 1 |
hepatic sinusoid | 1.05e-07 | 1 |
parenchyma | 1.05e-07 | 1 |
abdomen blood vessel | 1.05e-07 | 1 |
sinusoid | 1.05e-07 | 1 |
digestive system duct | 1.05e-07 | 1 |
abdominal segment blood vessel | 1.05e-07 | 1 |
trunk blood vessel | 1.05e-07 | 1 |
liver parenchyma | 1.05e-07 | 1 |
liver lobule | 1.05e-07 | 1 |
biliary system | 1.05e-07 | 1 |
biliary tree | 1.05e-07 | 1 |
biliary bud | 1.05e-07 | 1 |
hepatic duct | 1.05e-07 | 1 |
skeletal muscle tissue | 1.53e-07 | 9 |
striated muscle tissue | 1.53e-07 | 9 |
muscle tissue | 1.53e-07 | 9 |
multilaminar epithelium | 1.53e-07 | 9 |
epithelial vesicle | 1.53e-07 | 9 |
musculature | 1.53e-07 | 9 |
somite | 1.53e-07 | 9 |
myotome | 1.53e-07 | 9 |
presomitic mesoderm | 1.53e-07 | 9 |
presumptive segmental plate | 1.53e-07 | 9 |
dermomyotome | 1.53e-07 | 9 |
trunk paraxial mesoderm | 1.53e-07 | 9 |
musculature of body | 7.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.17e-28 | 6 |
musculoskeletal system cancer | 1.78e-21 | 3 |
muscle cancer | 1.78e-21 | 3 |
hematologic cancer | 8.39e-10 | 3 |
immune system cancer | 8.39e-10 | 3 |
leukemia | 8.39e-10 | 3 |