FFCP PHASE1:Mm9::chr19:32313495..32313543,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=208449|HGNC=|MCL_coexpression_id=15|UniProt=|association_with_transcript=-179bp_to_ENSMUST00000126332_5end|description=CAGE_peak_6_at_Sgms1_5end|id=chr19:32313495..32313543,-|ontology_enrichment_celltype=CL:0000050!1.58e-08!9|ontology_enrichment_celltype_v019_2=CL:0000050,7.84e-13,9;CL:0000553,2.32e-09,6;CL:0000556,2.32e-09,6;CL:0000839,4.03e-08,13;CL:0000049,7.72e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.38e-09,6;UBERON:0004457,4.38e-09,6;UBERON:0000042,4.38e-09,6;UBERON:0004854,4.38e-09,6;UBERON:0009034,4.38e-09,6;UBERON:0002095,4.38e-09,6;UBERON:0004782,4.38e-09,6;UBERON:0003281,4.38e-09,6;UBERON:0009664,4.38e-09,6;UBERON:0002296,4.38e-09,6;UBERON:0005602,4.38e-09,6;UBERON:0001179,4.38e-09,6;UBERON:0006293,4.38e-09,6;UBERON:0002107,7.13e-07,22;UBERON:0007499,7.13e-07,22;UBERON:0006925,7.13e-07,22;UBERON:0009497,7.13e-07,22;UBERON:0000015,7.13e-07,22;UBERON:0002423,7.13e-07,22;UBERON:0006235,7.13e-07,22;UBERON:0008835,7.13e-07,22;UBERON:0003894,7.13e-07,22;UBERON:0004161,7.13e-07,22;UBERON:0008836,7.13e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3183540416494,35.6356470606094,48.2697695908421,10.8834447048592,12.8887567589394,11.0341309467488,0,0,0,0,0,0,0,0,0,0,0,4.44521471421742,7.38077745101484,15.8481681015439,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.04686945442493,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,4.91981978929626,0,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,0.705532242814229,0,0,0.289198713839823,14.153768831198,2.75003644910596,7.72945314611377,13.5765070877862,0,0,0,0,1.31796636956512,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0.101839363850316,7.71323217782577,0.252722758433675,0,0,0,0,0.90422890701429,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0.828503090142008,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.928946687441754,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.685491075658373,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,14.5155241973002,12.7763346823582,21.3619006765611,23.1260538382893,16.8824011826692,18.8423130318251,11.5078454980324,9.24170792617702,5.49122826376163,4.31304619582064,2.60498663367952,1.24815069245824,0.252578877947112,0,0,0.369506380333209,0.568474235311454,0,0,0,0,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0,0,15.7201210334024,2.06386867963222,10.5560880600736,37.2969544869288,37.7276068510029,24.936820879511,1.86976272993241,0.839708713941948,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.675824501963113,0.469428954583016,0.13020438484395,0,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,3.59122386060928,2.39027048055788,2.67417388775123,2.30574478890781,1.10306105070008,2.00022055021454,1.23621034343337,1.60459604795908,1.51618327058278,1.2673964994512,1.50901073108861,1.591905626988,1.40855335290712,1.03383844120104,2.85776214769844,0.927074607558844,0.77163688185482,2.47251540481984,2.79677948255355,1.02860775715625,1.24233064311536,0.953744759789284,1.30811774969096,1.50575008664529,1.77690676572521,1.64635175585495,2.10455769150274,1.62964936615034,3.36685362994643,1.42362021749009,1.0835493061312,1.22769312950907,1.39443157067369,0.964533054905707,0,1.87145286756327,1.50409737833809,0,3.52946270591225,3.2461496986859|short_description=p6@Sgms1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:208449 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-179bp_to_ENSMUST00000126332_5end | |||
|cluster_id=chr19:32313495..32313543,- | |||
|description=CAGE_peak_6_at_Sgms1_5end | |||
|id=chr19:32313495..32313543,- | |||
|ontology_enrichment_celltype=CL:0000050!1.58e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,7.84e-13,9;CL:0000553,2.32e-09,6;CL:0000556,2.32e-09,6;CL:0000839,4.03e-08,13;CL:0000049,7.72e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.38e-09,6;UBERON:0004457,4.38e-09,6;UBERON:0000042,4.38e-09,6;UBERON:0004854,4.38e-09,6;UBERON:0009034,4.38e-09,6;UBERON:0002095,4.38e-09,6;UBERON:0004782,4.38e-09,6;UBERON:0003281,4.38e-09,6;UBERON:0009664,4.38e-09,6;UBERON:0002296,4.38e-09,6;UBERON:0005602,4.38e-09,6;UBERON:0001179,4.38e-09,6;UBERON:0006293,4.38e-09,6;UBERON:0002107,7.13e-07,22;UBERON:0007499,7.13e-07,22;UBERON:0006925,7.13e-07,22;UBERON:0009497,7.13e-07,22;UBERON:0000015,7.13e-07,22;UBERON:0002423,7.13e-07,22;UBERON:0006235,7.13e-07,22;UBERON:0008835,7.13e-07,22;UBERON:0003894,7.13e-07,22;UBERON:0004161,7.13e-07,22;UBERON:0008836,7.13e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3183540416494,35.6356470606094,48.2697695908421,10.8834447048592,12.8887567589394,11.0341309467488,0,0,0,0,0,0,0,0,0,0,0,4.44521471421742,7.38077745101484,15.8481681015439,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,7.04686945442493,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,4.91981978929626,0,1.04091196059682,0.608930956624282,0.230615497256059,0.904335843315735,0.705532242814229,0,0,0.289198713839823,14.153768831198,2.75003644910596,7.72945314611377,13.5765070877862,0,0,0,0,1.31796636956512,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0.101839363850316,7.71323217782577,0.252722758433675,0,0,0,0,0.90422890701429,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0.828503090142008,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.928946687441754,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.685491075658373,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,14.5155241973002,12.7763346823582,21.3619006765611,23.1260538382893,16.8824011826692,18.8423130318251,11.5078454980324,9.24170792617702,5.49122826376163,4.31304619582064,2.60498663367952,1.24815069245824,0.252578877947112,0,0,0.369506380333209,0.568474235311454,0,0,0,0,0,0,0.315270288212382,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0.322928853391811,0.0603129249281559,0,0,0,0,15.7201210334024,2.06386867963222,10.5560880600736,37.2969544869288,37.7276068510029,24.936820879511,1.86976272993241,0.839708713941948,1.38199973804424,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0.675824501963113,0.469428954583016,0.13020438484395,0,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.228620419965,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,3.59122386060928,2.39027048055788,2.67417388775123,2.30574478890781,1.10306105070008,2.00022055021454,1.23621034343337,1.60459604795908,1.51618327058278,1.2673964994512,1.50901073108861,1.591905626988,1.40855335290712,1.03383844120104,2.85776214769844,0.927074607558844,0.77163688185482,2.47251540481984,2.79677948255355,1.02860775715625,1.24233064311536,0.953744759789284,1.30811774969096,1.50575008664529,1.77690676572521,1.64635175585495,2.10455769150274,1.62964936615034,3.36685362994643,1.42362021749009,1.0835493061312,1.22769312950907,1.39443157067369,0.964533054905707,0,1.87145286756327,1.50409737833809,0,3.52946270591225,3.2461496986859 | |||
|short_description=p6@Sgms1 | |||
}} |
Revision as of 21:56, 3 August 2015
Short description: | p6@Sgms1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sgms1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -179bp_to_ENSMUST00000126332_5end |
EntrezGene: | 208449 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 7.84e-13 | 9 |
megakaryocyte progenitor cell | 2.32e-09 | 6 |
megakaryocyte | 2.32e-09 | 6 |
myeloid lineage restricted progenitor cell | 4.03e-08 | 13 |
common myeloid progenitor | 7.72e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.38e-09 | 6 |
cavity lining | 4.38e-09 | 6 |
serous membrane | 4.38e-09 | 6 |
gastrointestinal system mesentery | 4.38e-09 | 6 |
stomach region | 4.38e-09 | 6 |
mesentery | 4.38e-09 | 6 |
gastrointestinal system serosa | 4.38e-09 | 6 |
mesentery of stomach | 4.38e-09 | 6 |
gut mesentery | 4.38e-09 | 6 |
dorsal mesentery | 4.38e-09 | 6 |
dorsal mesogastrium | 4.38e-09 | 6 |
peritoneal cavity | 4.38e-09 | 6 |
spleen primordium | 4.38e-09 | 6 |
liver | 7.13e-07 | 22 |
epithelial sac | 7.13e-07 | 22 |
digestive gland | 7.13e-07 | 22 |
epithelium of foregut-midgut junction | 7.13e-07 | 22 |
anatomical boundary | 7.13e-07 | 22 |
hepatobiliary system | 7.13e-07 | 22 |
foregut-midgut junction | 7.13e-07 | 22 |
hepatic diverticulum | 7.13e-07 | 22 |
liver primordium | 7.13e-07 | 22 |
septum transversum | 7.13e-07 | 22 |
liver bud | 7.13e-07 | 22 |