FFCP PHASE1:Mm9::chr7:109054424..109054506,+: Difference between revisions
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{{FFCP|EntrezGene=66508|HGNC=|MCL_coexpression_id=247|UniProt=Q9CQ22|association_with_transcript=73bp_to_ENSMUST00000033131,NM_025605,uc009ipw.2_5end|description=CAGE_peak_1_at_2400001E08Rik_5end|id=chr7:109054424..109054506,+|ontology_enrichment_celltype=CL:0000055!2.90e-19!50;CL:0000221!4.37e-16!44;CL:0000133!4.37e-16!44;CL:0002319!5.01e-16!43;CL:0002321!1.47e-15!70;CL:0000220!1.47e-15!70;CL:0002371!6.35e-14!118;CL:0000393!1.24e-12!39;CL:0000211!1.24e-12!39;CL:0000548!1.78e-12!115;CL:0000004!1.78e-12!115;CL:0000255!1.78e-12!115;CL:0000144!4.74e-12!121;CL:0000012!4.74e-12!121;CL:0000540!3.74e-10!33;CL:0000047!3.74e-10!33;CL:0000031!3.74e-10!33;CL:0000404!3.74e-10!33;CL:0000723!1.15e-08!91;CL:0000048!1.15e-08!91;CL:0000117!1.15e-08!23;CL:0000337!1.15e-08!23;CL:0000034!1.11e-07!97;CL:0000333!2.05e-07!10;CL:0000095!2.05e-07!10;CL:0000243!2.05e-07!10;CL:0000123!2.05e-07!10;CL:0000125!2.05e-07!10;CL:0000030!2.05e-07!10;CL:0000339!2.05e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,4.37e-16,44;CL:0000133,4.37e-16,44;CL:0002319,5.01e-16,43;CL:0002321,1.47e-15,70;CL:0000393,1.24e-12,39;CL:0000211,1.24e-12,39;CL:0000540,3.74e-10,33;CL:0000047,3.74e-10,33;CL:0000031,3.74e-10,33;CL:0000404,3.74e-10,33;CL:0000723,1.15e-08,91;CL:0000048,1.15e-08,91;CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23;CL:0000034,1.11e-07,97;CL:0000333,2.05e-07,10;CL:0000095,2.05e-07,10;CL:0000243,2.05e-07,10;CL:0000123,2.05e-07,10;CL:0000125,2.05e-07,10;CL:0000030,2.05e-07,10;CL:0000339,2.05e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.59e-14!75;UBERON:0001016!1.59e-14!75;UBERON:0001017!1.33e-13!73;UBERON:0005743!1.33e-13!73;UBERON:0004121!2.90e-11!102;UBERON:0000924!2.90e-11!102;UBERON:0006601!2.90e-11!102;UBERON:0002020!1.85e-08!34;UBERON:0001049!4.84e-08!52;UBERON:0005068!4.84e-08!52;UBERON:0006241!4.84e-08!52;UBERON:0007135!4.84e-08!52;UBERON:0004111!2.03e-07!122;UBERON:0002616!3.73e-07!49;UBERON:0000025!4.26e-07!114;UBERON:0000955!6.66e-07!50;UBERON:0006238!6.66e-07!50;UBERON:0002791!9.21e-07!29;UBERON:0003528!9.21e-07!29;UBERON:0001893!9.21e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.59e-14,75;UBERON:0001017,1.33e-13,73;UBERON:0004121,5.51e-12,95;UBERON:0000924,5.51e-12,95;UBERON:0006601,5.51e-12,95;UBERON:0010314,3.91e-09,92;UBERON:0000073,9.46e-09,54;UBERON:0002020,1.85e-08,34;UBERON:0001049,4.84e-08,52;UBERON:0005068,4.84e-08,52;UBERON:0006241,4.84e-08,52;UBERON:0007135,4.84e-08,52;UBERON:0004111,2.03e-07,122;UBERON:0000025,4.26e-07,114;UBERON:0003528,9.21e-07,29;UBERON:0002791,9.21e-07,29;UBERON:0001893,9.21e-07,29|phase1_expression=61.6573061353457,77.1235650882988,90.0898493991281,63.5174843744343,62.6119662432934,62.451089151223,57.9359348676904,56.4268923439688,18.0209564354133,22.7042590532334,51.0229545312005,48.5812448281599,57.0098430670915,54.3754903046164,71.2854890285518,52.6435695213547,63.6601309096613,60.2532735834234,56.9024899463816,61.9608891625124,52.4717100232101,63.9433725733701,57.7251533997047,78.5562795915627,90.1578474593978,90.7286503301732,82.7063032625424,82.3100108860096,95.7718034060124,79.893551133898,92.0181619219515,113.670490549274,99.0254308011158,79.2408405077194,47.6605172589603,53.361321160076,51.2465084218546,166.157057402552,236.744609390712,129.833888505502,179.99883533749,169.395280269695,175.269237444246,86.6170107671972,95.5984461400022,99.2987929194697,468.652415264475,206.687848248663,237.920135901433,237.593336668774,158.744602123161,224.254000409356,49.1603035749168,56.5782470768849,44.0282876876628,188.056647742277,174.785398362642,194.408378788596,125.63852219381,80.935619828621,125.498617894223,272.769848315651,245.445363726674,476.496900300501,424.223669541232,500.888481037001,348.135328422386,396.897509397166,102.86009541001,117.050148533576,120.726527815693,154.251531578054,134.288072898581,99.9524921594025,82.0437231916103,122.256098619133,104.610086949419,95.1270668734648,94.007198352821,103.530735868202,86.8217737786868,100.015367146898,136.520486511675,94.5441184853222,82.6638520472543,95.4596616934683,93.6805659658097,94.5045190334274,129.718969179744,111.165764917082,58.8424912064406,124.761462162301,91.1161587168386,102.003903219547,120.858413645266,77.0606245807417,97.0470943110405,109.757127740269,186.006779295654,174.196410233598,81.548340050698,89.8285341900225,58.6052051325285,63.9960032837998,107.596047382573,105.651063903116,126.886635698711,64.0571565223926,53.0822661476702,69.0255946651435,65.7509388443655,67.8958016636075,62.4967997563919,67.071575045917,62.3220147819235,84.8249491475309,101.102741803359,84.3014250843085,64.5765702923408,75.0598183755979,80.1654712011229,59.6396561356323,68.9649516507052,60.3128441843787,68.2796264211864,82.512628832375,44.9306716897201,66.5892031402683,48.9220374231299,69.9522286020522,67.7100892171567,67.7276957888339,75.0921063230634,57.280262441994,78.9594569326328,70.8994319606101,71.3893940590717,68.9214617179915,112.461627502985,123.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66508 | |||
|HGNC= | |||
|MCL_coexpression_id=247 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CQ22 | |||
|association_with_transcript=73bp_to_ENSMUST00000033131,NM_025605,uc009ipw.2_5end | |||
|cluster_id=chr7:109054424..109054506,+ | |||
|description=CAGE_peak_1_at_2400001E08Rik_5end | |||
|id=chr7:109054424..109054506,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.90e-19!50;CL:0000221!4.37e-16!44;CL:0000133!4.37e-16!44;CL:0002319!5.01e-16!43;CL:0002321!1.47e-15!70;CL:0000220!1.47e-15!70;CL:0002371!6.35e-14!118;CL:0000393!1.24e-12!39;CL:0000211!1.24e-12!39;CL:0000548!1.78e-12!115;CL:0000004!1.78e-12!115;CL:0000255!1.78e-12!115;CL:0000144!4.74e-12!121;CL:0000012!4.74e-12!121;CL:0000540!3.74e-10!33;CL:0000047!3.74e-10!33;CL:0000031!3.74e-10!33;CL:0000404!3.74e-10!33;CL:0000723!1.15e-08!91;CL:0000048!1.15e-08!91;CL:0000117!1.15e-08!23;CL:0000337!1.15e-08!23;CL:0000034!1.11e-07!97;CL:0000333!2.05e-07!10;CL:0000095!2.05e-07!10;CL:0000243!2.05e-07!10;CL:0000123!2.05e-07!10;CL:0000125!2.05e-07!10;CL:0000030!2.05e-07!10;CL:0000339!2.05e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.37e-16,44;CL:0000133,4.37e-16,44;CL:0002319,5.01e-16,43;CL:0002321,1.47e-15,70;CL:0000393,1.24e-12,39;CL:0000211,1.24e-12,39;CL:0000540,3.74e-10,33;CL:0000047,3.74e-10,33;CL:0000031,3.74e-10,33;CL:0000404,3.74e-10,33;CL:0000723,1.15e-08,91;CL:0000048,1.15e-08,91;CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23;CL:0000034,1.11e-07,97;CL:0000333,2.05e-07,10;CL:0000095,2.05e-07,10;CL:0000243,2.05e-07,10;CL:0000123,2.05e-07,10;CL:0000125,2.05e-07,10;CL:0000030,2.05e-07,10;CL:0000339,2.05e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-14!75;UBERON:0001016!1.59e-14!75;UBERON:0001017!1.33e-13!73;UBERON:0005743!1.33e-13!73;UBERON:0004121!2.90e-11!102;UBERON:0000924!2.90e-11!102;UBERON:0006601!2.90e-11!102;UBERON:0002020!1.85e-08!34;UBERON:0001049!4.84e-08!52;UBERON:0005068!4.84e-08!52;UBERON:0006241!4.84e-08!52;UBERON:0007135!4.84e-08!52;UBERON:0004111!2.03e-07!122;UBERON:0002616!3.73e-07!49;UBERON:0000025!4.26e-07!114;UBERON:0000955!6.66e-07!50;UBERON:0006238!6.66e-07!50;UBERON:0002791!9.21e-07!29;UBERON:0003528!9.21e-07!29;UBERON:0001893!9.21e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.59e-14,75;UBERON:0001017,1.33e-13,73;UBERON:0004121,5.51e-12,95;UBERON:0000924,5.51e-12,95;UBERON:0006601,5.51e-12,95;UBERON:0010314,3.91e-09,92;UBERON:0000073,9.46e-09,54;UBERON:0002020,1.85e-08,34;UBERON:0001049,4.84e-08,52;UBERON:0005068,4.84e-08,52;UBERON:0006241,4.84e-08,52;UBERON:0007135,4.84e-08,52;UBERON:0004111,2.03e-07,122;UBERON:0000025,4.26e-07,114;UBERON:0003528,9.21e-07,29;UBERON:0002791,9.21e-07,29;UBERON:0001893,9.21e-07,29 | |||
|phase1_expression=61.6573061353457,77.1235650882988,90.0898493991281,63.5174843744343,62.6119662432934,62.451089151223,57.9359348676904,56.4268923439688,18.0209564354133,22.7042590532334,51.0229545312005,48.5812448281599,57.0098430670915,54.3754903046164,71.2854890285518,52.6435695213547,63.6601309096613,60.2532735834234,56.9024899463816,61.9608891625124,52.4717100232101,63.9433725733701,57.7251533997047,78.5562795915627,90.1578474593978,90.7286503301732,82.7063032625424,82.3100108860096,95.7718034060124,79.893551133898,92.0181619219515,113.670490549274,99.0254308011158,79.2408405077194,47.6605172589603,53.361321160076,51.2465084218546,166.157057402552,236.744609390712,129.833888505502,179.99883533749,169.395280269695,175.269237444246,86.6170107671972,95.5984461400022,99.2987929194697,468.652415264475,206.687848248663,237.920135901433,237.593336668774,158.744602123161,224.254000409356,49.1603035749168,56.5782470768849,44.0282876876628,188.056647742277,174.785398362642,194.408378788596,125.63852219381,80.935619828621,125.498617894223,272.769848315651,245.445363726674,476.496900300501,424.223669541232,500.888481037001,348.135328422386,396.897509397166,102.86009541001,117.050148533576,120.726527815693,154.251531578054,134.288072898581,99.9524921594025,82.0437231916103,122.256098619133,104.610086949419,95.1270668734648,94.007198352821,103.530735868202,86.8217737786868,100.015367146898,136.520486511675,94.5441184853222,82.6638520472543,95.4596616934683,93.6805659658097,94.5045190334274,129.718969179744,111.165764917082,58.8424912064406,124.761462162301,91.1161587168386,102.003903219547,120.858413645266,77.0606245807417,97.0470943110405,109.757127740269,186.006779295654,174.196410233598,81.548340050698,89.8285341900225,58.6052051325285,63.9960032837998,107.596047382573,105.651063903116,126.886635698711,64.0571565223926,53.0822661476702,69.0255946651435,65.7509388443655,67.8958016636075,62.4967997563919,67.071575045917,62.3220147819235,84.8249491475309,101.102741803359,84.3014250843085,64.5765702923408,75.0598183755979,80.1654712011229,59.6396561356323,68.9649516507052,60.3128441843787,68.2796264211864,82.512628832375,44.9306716897201,66.5892031402683,48.9220374231299,69.9522286020522,67.7100892171567,67.7276957888339,75.0921063230634,57.280262441994,78.9594569326328,70.8994319606101,71.3893940590717,68.9214617179915,112.461627502985,123.950253117133,60.1156446487691,65.7520018679732,61.0410620040134,57.2678307775717,52.4561408456738,53.1671939182127,60.5313140655848,75.8000876265316,66.6105098162483,48.7893686832974,60.3512355882345,77.1568978145063,46.7119378699004,58.8546161422461,58.0305624670401,50.1566352382603,63.1991868581911,64.3369767786788,67.3467493567555,76.2222842930647,73.6411828340642,73.105196953172,70.5499312043926,76.3445219179927,69.4202007993202,77.6663375466362,87.7254022576755,76.1310032233945,91.3307167019817,85.6954162492877,89.6621033577164,103.948191059411,86.0636451940918,86.0263144253983,65.6104639520077,67.299616496052,77.3179952182087,81.1863239657081,63.9864751605702,47.8407544032503,62.114116357249,85.3121309156739,100.292497774037,118.891016320349,62.6378361238755,94.3725010568582,82.9406189040889,96.0959759958758,80.9100961544349,71.9055526923377,68.9480379100275,66.712326540213,91.6095961603385,53.8110494391823,49.5914036961554,50.3018779777926,54.3066964069352,72.8009810461507,59.6320545081746,68.7863289584946,71.2774224399842,73.0511210417059,91.603861769929,49.8866866091121,56.2158726023761,54.8663554219043,54.3665125321188,54.7472152637986,55.2538098365681,56.9638352152605,53.6667600625367,60.1289494881898,48.8811902193005,68.8460753186731,88.9307368376498,93.7067637183785,82.3434128065577,79.1207375035922,61.8923187058126,71.2487708257023,53.9414072023106,63.4846620799204,56.090969340952,60.1347464216119,62.8435211939076,68.1016431023718,58.0097330310783,68.875518480769,74.624831731704,61.1210163889703,63.8934432903814,60.3186574284903,294.043003681581,381.277884356915,99.8281474228644,70.6398070540115,79.3119914539692,81.8137572413578,53.6067271381729,130.527469364661,105.37974528503,105.418460960092,72.5976850359532,98.9330823523565,91.3474563737816,78.6952755592954,106.465214540497,103.166317842693,85.7774478143956,62.9789780186742,54.3630526347669,70.5139790522331,77.3713056929486,57.7395430403874,45.1333470355874,60.9379396749003,68.9297709879632,57.5245493255489,61.7180956120815,58.4126781093462,48.0676625292891,55.2571268805808,51.3356224873999,45.5092931427575,35.8423269154996,54.661837921539,53.1085784975909,63.2014440049899,81.2372534155698,70.7312215604255,61.7144013075112,77.4120668392986,67.7941964880738,97.1243187675572,103.255551548033,113.11832584128,64.8353490281588,63.9758661412943,52.7988675295611,66.8267208203967,67.326002017769,61.716978304143,67.3320732614955,83.0705353007083,63.9057094183969,69.3459876356428,49.6321333350827,48.4106934502056,49.3466162072901,45.2980782948915,38.4151251786113,40.3060182692135,33.0297937392573,111.696462307768,71.49193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| |||
|short_description=p1@2400001E08Rik | |||
}} |
Revision as of 22:45, 3 August 2015
Short description: | p1@2400001E08Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2400001E08Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 73bp_to_ENSMUST00000033131, NM_025605, uc009ipw.2_5end |
EntrezGene: | 66508 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.37e-16 | 44 |
neurectodermal cell | 4.37e-16 | 44 |
neural cell | 5.01e-16 | 43 |
embryonic cell | 1.47e-15 | 70 |
electrically responsive cell | 1.24e-12 | 39 |
electrically active cell | 1.24e-12 | 39 |
neuron | 3.74e-10 | 33 |
neuronal stem cell | 3.74e-10 | 33 |
neuroblast | 3.74e-10 | 33 |
electrically signaling cell | 3.74e-10 | 33 |
somatic stem cell | 1.15e-08 | 91 |
multi fate stem cell | 1.15e-08 | 91 |
CNS neuron (sensu Vertebrata) | 1.15e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-08 | 23 |
stem cell | 1.11e-07 | 97 |
migratory neural crest cell | 2.05e-07 | 10 |
neuron associated cell | 2.05e-07 | 10 |
glial cell (sensu Vertebrata) | 2.05e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.05e-07 | 10 |
glial cell | 2.05e-07 | 10 |
glioblast | 2.05e-07 | 10 |
glioblast (sensu Vertebrata) | 2.05e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.59e-14 | 75 |
central nervous system | 1.33e-13 | 73 |
ectoderm-derived structure | 5.51e-12 | 95 |
ectoderm | 5.51e-12 | 95 |
presumptive ectoderm | 5.51e-12 | 95 |
structure with developmental contribution from neural crest | 3.91e-09 | 92 |
regional part of nervous system | 9.46e-09 | 54 |
gray matter | 1.85e-08 | 34 |
neural tube | 4.84e-08 | 52 |
neural rod | 4.84e-08 | 52 |
future spinal cord | 4.84e-08 | 52 |
neural keel | 4.84e-08 | 52 |
anatomical conduit | 2.03e-07 | 122 |
tube | 4.26e-07 | 114 |
brain grey matter | 9.21e-07 | 29 |
regional part of telencephalon | 9.21e-07 | 29 |
telencephalon | 9.21e-07 | 29 |