FFCP PHASE1:Mm9::chr7:112630367..112630418,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1133|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:112630367..112630418,-|id=chr7:112630367..112630418,-|ontology_enrichment_celltype=CL:0000055!1.61e-08!50;CL:0000221!8.42e-08!44;CL:0000133!8.42e-08!44;CL:0002319!2.27e-07!43;CL:0000333!5.12e-07!10;CL:0000095!5.12e-07!10;CL:0000243!5.12e-07!10;CL:0000123!5.12e-07!10;CL:0000125!5.12e-07!10;CL:0000030!5.12e-07!10;CL:0000339!5.12e-07!10;CL:0000117!8.30e-07!23;CL:0000337!8.30e-07!23|ontology_enrichment_celltype_v019_2=CL:0000221,3.44e-09,44;CL:0000133,3.44e-09,44;CL:0002319,1.16e-08,43;CL:0000333,2.53e-08,10;CL:0000095,2.53e-08,10;CL:0000243,2.53e-08,10;CL:0000123,2.53e-08,10;CL:0000125,2.53e-08,10;CL:0000030,2.53e-08,10;CL:0000339,2.53e-08,10;CL:0002453,1.27e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.46e-18!75;UBERON:0001016!4.46e-18!75;UBERON:0001017!2.74e-17!73;UBERON:0005743!2.74e-17!73;UBERON:0001049!2.65e-16!52;UBERON:0005068!2.65e-16!52;UBERON:0006241!2.65e-16!52;UBERON:0007135!2.65e-16!52;UBERON:0004121!3.29e-16!102;UBERON:0000924!3.29e-16!102;UBERON:0006601!3.29e-16!102;UBERON:0000955!7.03e-16!50;UBERON:0006238!7.03e-16!50;UBERON:0002616!2.76e-15!49;UBERON:0000033!7.99e-15!63;UBERON:0002020!5.32e-13!34;UBERON:0002346!1.47e-12!71;UBERON:0003075!1.47e-12!71;UBERON:0007284!1.47e-12!71;UBERON:0004111!6.90e-12!122;UBERON:0000025!4.60e-11!114;UBERON:0002791!5.31e-11!29;UBERON:0003528!5.31e-11!29;UBERON:0001893!5.31e-11!29;UBERON:0003080!2.44e-10!40;UBERON:0002780!9.26e-10!39;UBERON:0001890!9.26e-10!39;UBERON:0006240!9.26e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0002619!3.16e-08!17;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!2.62e-07!12;UBERON:0003057!2.62e-07!12;UBERON:0002021!4.69e-07!10;UBERON:0000411!4.69e-07!10;UBERON:0001950!4.69e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.99e-20,75;UBERON:0001017,1.80e-19,73;UBERON:0000073,8.85e-18,54;UBERON:0001049,1.78e-16,52;UBERON:0005068,1.78e-16,52;UBERON:0006241,1.78e-16,52;UBERON:0007135,1.78e-16,52;UBERON:0004121,5.63e-16,95;UBERON:0000924,5.63e-16,95;UBERON:0006601,5.63e-16,95;UBERON:0010314,4.39e-15,92;UBERON:0000955,6.21e-14,47;UBERON:0006238,6.21e-14,47;UBERON:0002020,8.40e-14,34;UBERON:0002616,2.87e-13,46;UBERON:0002346,2.25e-12,64;UBERON:0003075,2.25e-12,64;UBERON:0007284,2.25e-12,64;UBERON:0010371,3.67e-12,73;UBERON:0004111,3.99e-12,122;UBERON:0003528,2.22e-11,29;UBERON:0002791,2.22e-11,29;UBERON:0001893,2.22e-11,29;UBERON:0000025,3.29e-11,114;UBERON:0003080,1.35e-09,40;UBERON:0002780,6.00e-09,39;UBERON:0001890,6.00e-09,39;UBERON:0006240,6.00e-09,39;UBERON:0003076,1.10e-08,12;UBERON:0003057,1.10e-08,12;UBERON:0002021,2.27e-08,10;UBERON:0000411,2.27e-08,10;UBERON:0001950,2.27e-08,10;UBERON:0002619,3.68e-08,17;UBERON:0000956,5.60e-08,21;UBERON:0001869,5.60e-08,21;UBERON:0000203,5.60e-08,21;UBERON:0003056,1.12e-07,49|phase1_expression=4.32401887182944,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.27564935226605,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.53442328048786,2.20256102594018,3.12956537739216,18.7501634487184,16.2567775223509,10.8880743481599,3.21968769738334,15.8127820801469,0,0,0,3.8588915405392,3.15186783932632,1.03134418455488,3.03474691289397,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0,0.7104801149461,8.38880309451533,22.6688800139717,0.518448061542388,1.21505344498522,1.05162480675691,2.28520787523043,3.53389665522582,0.734944795289724,0.575072826109418,0.919218786610021,7.70811166995721,4.21368215681119,6.91229399653096,2.50583946687368,2.47016637726506,1.04182674111352,1.3959149950069,8.4414391504752,4.5839474333043,5.00868595305235,2.27794689278565,1.86399445825301,1.96888102666279,2.79614772395106,0.579728977403356,0,0,0,0,0,1.12355536105401,5.79463096765396,2.33807404142582,2.47337702157238,4.3661460130771,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,0,0.742210695324124,0.867426633830679,1.21786191324856,1.38369298353635,0.60289056221049,0.117588707135705,1.25666591329675,0.494389935468748,1.59059292611903,0,2.10296904931632,0.441683036920787,0.484875253135222,3.72783522436244,4.39171195517321,3.35114730901528,0.510914110417183,0,0,0,8.53806644607489,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,7.06479351502504,4.38051410282946,1.83310854930569,1.11966273549084,1.76905930903572,1.47309299120532,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,0.612328492361951,0.768682321709099,1.03071897015702,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,1.03562886267751,2.11073453982987,2.16074473753218,1.89395788468168,2.16440654922144,1.85120535464854,3.25547522650571,1.87791380979733,0.934122738937356,1.6455984991348,1.47750717671186,0.810688095458557,1.16959989940266,1.3173006917463,0.805238512562231,5.67782861123144,2.88132914661996,0,0.528901133327089,0,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,1.32878813789265,0.956728611944923,1.80249646187312,1.72684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,9.63303539926752,6.91548950893999,3.11476396215683,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.395287777946524,6.10510501201433,1.41940085208269,1.06839362200353,0.977321756121456,1.97964147567043,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,5.10659408630682,0,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,2.81606049676452,0.847328283455281,0.220528398054962,0.65954501176592,1.29171541356724,1.08563264870681,1.55184047204077,0.492422699235184,0.291480836629851,9.6421157045465,0.341741761595705,1.65109494370578,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0.87345025498471,1.61837215661785,0.991841468704031,2.09404753587224,0.388844919875379,0,0,0.448549638131936,0,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.651021924219751,0.314578033277133,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,1.54551675225752,2.25218970541418,2.38097111547445,1.71494703263253,2.00628841614145,7.90652579663893,8.28585425712918,3.43737308063638,4.1244763762485,8.22099023724771,6.7985450765073,5.40018000185445,3.60256962579376,4.07828168085784,8.28416498802912,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,1.25767897576789,2.5738091183002,1.33348036680969,1.44224540067226,1.92551525755089,2.02157769411038,0.760437899670719,0.943131706930381,1.591905626988,1.53660365771686,1.49332219284595,1.90517476513229,1.62238056322798,1.54327376370964,0.824171801606613,1.91358596174717,1.71434626192708,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.4384483341585,0.73171189149109,1.31534855718921,1.08643291076689,2.80571135828869,1.77952527186261,1.77308068276014,1.63692417267876,1.23949472948773,0.964533054905707,2.49810577937946,1.16965804222704,1.28922632428979,1.3390183244819,2.20591419119516,2.31867835620421|short_description=p@chr7:112630367..112630418,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1133 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:112630367..112630418,- | |||
|description=CAGE_peak_at_chr7:112630367..112630418,- | |||
|id=chr7:112630367..112630418,- | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-08!50;CL:0000221!8.42e-08!44;CL:0000133!8.42e-08!44;CL:0002319!2.27e-07!43;CL:0000333!5.12e-07!10;CL:0000095!5.12e-07!10;CL:0000243!5.12e-07!10;CL:0000123!5.12e-07!10;CL:0000125!5.12e-07!10;CL:0000030!5.12e-07!10;CL:0000339!5.12e-07!10;CL:0000117!8.30e-07!23;CL:0000337!8.30e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.44e-09,44;CL:0000133,3.44e-09,44;CL:0002319,1.16e-08,43;CL:0000333,2.53e-08,10;CL:0000095,2.53e-08,10;CL:0000243,2.53e-08,10;CL:0000123,2.53e-08,10;CL:0000125,2.53e-08,10;CL:0000030,2.53e-08,10;CL:0000339,2.53e-08,10;CL:0002453,1.27e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.46e-18!75;UBERON:0001016!4.46e-18!75;UBERON:0001017!2.74e-17!73;UBERON:0005743!2.74e-17!73;UBERON:0001049!2.65e-16!52;UBERON:0005068!2.65e-16!52;UBERON:0006241!2.65e-16!52;UBERON:0007135!2.65e-16!52;UBERON:0004121!3.29e-16!102;UBERON:0000924!3.29e-16!102;UBERON:0006601!3.29e-16!102;UBERON:0000955!7.03e-16!50;UBERON:0006238!7.03e-16!50;UBERON:0002616!2.76e-15!49;UBERON:0000033!7.99e-15!63;UBERON:0002020!5.32e-13!34;UBERON:0002346!1.47e-12!71;UBERON:0003075!1.47e-12!71;UBERON:0007284!1.47e-12!71;UBERON:0004111!6.90e-12!122;UBERON:0000025!4.60e-11!114;UBERON:0002791!5.31e-11!29;UBERON:0003528!5.31e-11!29;UBERON:0001893!5.31e-11!29;UBERON:0003080!2.44e-10!40;UBERON:0002780!9.26e-10!39;UBERON:0001890!9.26e-10!39;UBERON:0006240!9.26e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0002619!3.16e-08!17;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!2.62e-07!12;UBERON:0003057!2.62e-07!12;UBERON:0002021!4.69e-07!10;UBERON:0000411!4.69e-07!10;UBERON:0001950!4.69e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.99e-20,75;UBERON:0001017,1.80e-19,73;UBERON:0000073,8.85e-18,54;UBERON:0001049,1.78e-16,52;UBERON:0005068,1.78e-16,52;UBERON:0006241,1.78e-16,52;UBERON:0007135,1.78e-16,52;UBERON:0004121,5.63e-16,95;UBERON:0000924,5.63e-16,95;UBERON:0006601,5.63e-16,95;UBERON:0010314,4.39e-15,92;UBERON:0000955,6.21e-14,47;UBERON:0006238,6.21e-14,47;UBERON:0002020,8.40e-14,34;UBERON:0002616,2.87e-13,46;UBERON:0002346,2.25e-12,64;UBERON:0003075,2.25e-12,64;UBERON:0007284,2.25e-12,64;UBERON:0010371,3.67e-12,73;UBERON:0004111,3.99e-12,122;UBERON:0003528,2.22e-11,29;UBERON:0002791,2.22e-11,29;UBERON:0001893,2.22e-11,29;UBERON:0000025,3.29e-11,114;UBERON:0003080,1.35e-09,40;UBERON:0002780,6.00e-09,39;UBERON:0001890,6.00e-09,39;UBERON:0006240,6.00e-09,39;UBERON:0003076,1.10e-08,12;UBERON:0003057,1.10e-08,12;UBERON:0002021,2.27e-08,10;UBERON:0000411,2.27e-08,10;UBERON:0001950,2.27e-08,10;UBERON:0002619,3.68e-08,17;UBERON:0000956,5.60e-08,21;UBERON:0001869,5.60e-08,21;UBERON:0000203,5.60e-08,21;UBERON:0003056,1.12e-07,49 | |||
|phase1_expression=4.32401887182944,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.27564935226605,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.53442328048786,2.20256102594018,3.12956537739216,18.7501634487184,16.2567775223509,10.8880743481599,3.21968769738334,15.8127820801469,0,0,0,3.8588915405392,3.15186783932632,1.03134418455488,3.03474691289397,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0,0.7104801149461,8.38880309451533,22.6688800139717,0.518448061542388,1.21505344498522,1.05162480675691,2.28520787523043,3.53389665522582,0.734944795289724,0.575072826109418,0.919218786610021,7.70811166995721,4.21368215681119,6.91229399653096,2.50583946687368,2.47016637726506,1.04182674111352,1.3959149950069,8.4414391504752,4.5839474333043,5.00868595305235,2.27794689278565,1.86399445825301,1.96888102666279,2.79614772395106,0.579728977403356,0,0,0,0,0,1.12355536105401,5.79463096765396,2.33807404142582,2.47337702157238,4.3661460130771,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,0,0.742210695324124,0.867426633830679,1.21786191324856,1.38369298353635,0.60289056221049,0.117588707135705,1.25666591329675,0.494389935468748,1.59059292611903,0,2.10296904931632,0.441683036920787,0.484875253135222,3.72783522436244,4.39171195517321,3.35114730901528,0.510914110417183,0,0,0,8.53806644607489,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,7.06479351502504,4.38051410282946,1.83310854930569,1.11966273549084,1.76905930903572,1.47309299120532,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,0.612328492361951,0.768682321709099,1.03071897015702,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,1.03562886267751,2.11073453982987,2.16074473753218,1.89395788468168,2.16440654922144,1.85120535464854,3.25547522650571,1.87791380979733,0.934122738937356,1.6455984991348,1.47750717671186,0.810688095458557,1.16959989940266,1.3173006917463,0.805238512562231,5.67782861123144,2.88132914661996,0,0.528901133327089,0,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,1.32878813789265,0.956728611944923,1.80249646187312,1.72684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,9.63303539926752,6.91548950893999,3.11476396215683,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.395287777946524,6.10510501201433,1.41940085208269,1.06839362200353,0.977321756121456,1.97964147567043,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,5.10659408630682,0,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,2.81606049676452,0.847328283455281,0.220528398054962,0.65954501176592,1.29171541356724,1.08563264870681,1.55184047204077,0.492422699235184,0.291480836629851,9.6421157045465,0.341741761595705,1.65109494370578,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0.87345025498471,1.61837215661785,0.991841468704031,2.09404753587224,0.388844919875379,0,0,0.448549638131936,0,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.651021924219751,0.314578033277133,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,1.54551675225752,2.25218970541418,2.38097111547445,1.71494703263253,2.00628841614145,7.90652579663893,8.28585425712918,3.43737308063638,4.1244763762485,8.22099023724771,6.7985450765073,5.40018000185445,3.60256962579376,4.07828168085784,8.28416498802912,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,1.25767897576789,2.5738091183002,1.33348036680969,1.44224540067226,1.92551525755089,2.02157769411038,0.760437899670719,0.943131706930381,1.591905626988,1.53660365771686,1.49332219284595,1.90517476513229,1.62238056322798,1.54327376370964,0.824171801606613,1.91358596174717,1.71434626192708,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.4384483341585,0.73171189149109,1.31534855718921,1.08643291076689,2.80571135828869,1.77952527186261,1.77308068276014,1.63692417267876,1.23949472948773,0.964533054905707,2.49810577937946,1.16965804222704,1.28922632428979,1.3390183244819,2.20591419119516,2.31867835620421 | |||
|short_description=p@chr7:112630367..112630418,- | |||
}} |
Latest revision as of 23:48, 3 August 2015
Short description: | p@chr7:112630367..112630418, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:112630367..112630418, - |
Coexpression cluster: | MCL_coexpression_mm9:1133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.44e-09 | 44 |
neurectodermal cell | 3.44e-09 | 44 |
neural cell | 1.16e-08 | 43 |
migratory neural crest cell | 2.53e-08 | 10 |
neuron associated cell | 2.53e-08 | 10 |
glial cell (sensu Vertebrata) | 2.53e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.53e-08 | 10 |
glial cell | 2.53e-08 | 10 |
glioblast | 2.53e-08 | 10 |
glioblast (sensu Vertebrata) | 2.53e-08 | 10 |
oligodendrocyte precursor cell | 1.27e-07 | 8 |