FFCP PHASE1:Mm9::chr11:75751228..75751254,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380714|HGNC=|MCL_coexpression_id=477|UniProt=Q768S4|association_with_transcript=0bp_to_ENSMUST00000121287_5end|description=CAGE_peak_3_at_Rph3al_5end|id=chr11:75751228..75751254,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.37e-08!59;UBERON:0005157!2.12e-08!27;UBERON:0000160!1.99e-07!43;UBERON:0000007!3.84e-07!8;UBERON:0003296!3.84e-07!8;UBERON:0010133!3.84e-07!8;UBERON:0000464!8.64e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.10e-12,8;UBERON:0003296,2.10e-12,8;UBERON:0010133,2.10e-12,8;UBERON:0001894,1.82e-09,10;UBERON:0006222,1.82e-09,10;UBERON:0002369,4.26e-08,7;UBERON:0006858,4.26e-08,7;UBERON:0002048,1.50e-07,14;UBERON:0000117,1.50e-07,14;UBERON:0000171,1.50e-07,14;UBERON:0000170,1.50e-07,14;UBERON:0005597,1.50e-07,14;UBERON:0000118,1.50e-07,14|phase1_expression=5.60520964866779,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.288851619751275,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,0.45673551887624,0.517875767294343,2.3750742250372,2.4287945747259,2.43572382649713,2.53677046981664,1.80867168663147,1.05829836422134,1.13099932196708,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,5.59175283654366,0,0,1.02182822083437,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.758168275301024,0,0.650602214813519,0.919608417733892,0.720248519221397,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.900310307305074,1.18372367792605,0.787056926989615,0.771335564436891,1.39520366850245,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.324275238183423,0.730999937126662,0,0.671032093801859,0.420579897128254,0.823236899034275,0,0.264450566663544,0.426576501070468,1.85789337488351,0.902072229254653,3.02525286935014,2.66853652613844,2.47293313946327,2.37264530772256,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,1.79763881730844,1.51296634912286,0.796565093017469,0.758671603812327,0.685491075658373,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,1.45444035385792,0.738050739898011,1.09899109488962,0.740382983530803,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,5.91210208533135,0.37898282354097,0.814824882210129,0.509235257325564,0.469380496577004,2.68010011906905,2.61848004974615,1.75620283072019,1.26108115284953,1.10732344824387,1.75400245523236,1.80249646187312,2.24490476425664,3.03763023021174,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0.631016438832513,0,0.861693590931196,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,0,1.98716119291576,1.06839362200353,0.81443479676788,5.60898418106621,0,0.971122544619926,1.81394134178851,1.69744571780308,2.65771703592696,2.45948118355142,1.29214146584111,0.727067458955011,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,16.000661470428,5.221771726908,14.4881725836685,15.8609405923378,14.3645589250242,11.7723419617367,10.2020392773315,5.78483403317739,0,0,0.220528398054962,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,1.1659233465194,0.370850604021019,0.170870880797853,1.23832120777933,0.370389054739423,0,0.136694227721025,0,0,0.279902904647316,0.276399947608848,1.90934123603023,1.26534397432454,0.609958401380546,1.40406943068342,0.209088296014469,0.655087691238533,0.944050424693745,0.991841468704031,0.523511883968059,3.75883422546199,1.24267862617385,0,0.747582730219894,0.496375471371293,0.777804753376191,1.29159823477731,0.844780627453891,1.29092962510329,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.102710957164827,0.389762468933385,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.386379188064381,1.31377732815827,5.49454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,1.02440163452481,0.486213434136588,0,0.367687016900028,0.666740183404846,1.44224540067226,1.28367683836726,0.758091635291392,0.50695859978048,0.754505365544305,1.03005658216871,1.15245274328765,0.689225627467359,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0.789209134313529,0.814824683075171,0,1.30498519936592,0.492522411877817,0.818462086339379,1.08455788830176,0.964533054905707,0.749431733813838,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421|short_description=p3@Rph3al}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380714 | |||
|HGNC= | |||
|MCL_coexpression_id=477 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q768S4 | |||
|association_with_transcript=0bp_to_ENSMUST00000121287_5end | |||
|cluster_id=chr11:75751228..75751254,- | |||
|description=CAGE_peak_3_at_Rph3al_5end | |||
|id=chr11:75751228..75751254,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.37e-08!59;UBERON:0005157!2.12e-08!27;UBERON:0000160!1.99e-07!43;UBERON:0000007!3.84e-07!8;UBERON:0003296!3.84e-07!8;UBERON:0010133!3.84e-07!8;UBERON:0000464!8.64e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.10e-12,8;UBERON:0003296,2.10e-12,8;UBERON:0010133,2.10e-12,8;UBERON:0001894,1.82e-09,10;UBERON:0006222,1.82e-09,10;UBERON:0002369,4.26e-08,7;UBERON:0006858,4.26e-08,7;UBERON:0002048,1.50e-07,14;UBERON:0000117,1.50e-07,14;UBERON:0000171,1.50e-07,14;UBERON:0000170,1.50e-07,14;UBERON:0005597,1.50e-07,14;UBERON:0000118,1.50e-07,14 | |||
|phase1_expression=5.60520964866779,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.288851619751275,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,0.45839474333043,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0,0,0.45673551887624,0.517875767294343,2.3750742250372,2.4287945747259,2.43572382649713,2.53677046981664,1.80867168663147,1.05829836422134,1.13099932196708,0.247194967734374,0,0.884610551949874,0.161766849947409,0.220841518460394,0,5.59175283654366,0,0,1.02182822083437,0,0,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.124406970610093,0.758168275301024,0,0.650602214813519,0.919608417733892,0.720248519221397,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0,0,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.234526059981096,0.900310307305074,1.18372367792605,0.787056926989615,0.771335564436891,1.39520366850245,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.324275238183423,0.730999937126662,0,0.671032093801859,0.420579897128254,0.823236899034275,0,0.264450566663544,0.426576501070468,1.85789337488351,0.902072229254653,3.02525286935014,2.66853652613844,2.47293313946327,2.37264530772256,1.15289268306808,1.50801125280162,1.1937388322469,1.16978452271472,1.79763881730844,1.51296634912286,0.796565093017469,0.758671603812327,0.685491075658373,1.1270773567308,0.814605311381257,0.387904974335251,0.771494018793504,1.45444035385792,0.738050739898011,1.09899109488962,0.740382983530803,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,5.91210208533135,0.37898282354097,0.814824882210129,0.509235257325564,0.469380496577004,2.68010011906905,2.61848004974615,1.75620283072019,1.26108115284953,1.10732344824387,1.75400245523236,1.80249646187312,2.24490476425664,3.03763023021174,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0.631016438832513,0,0.861693590931196,0.477937595905104,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,0,1.98716119291576,1.06839362200353,0.81443479676788,5.60898418106621,0,0.971122544619926,1.81394134178851,1.69744571780308,2.65771703592696,2.45948118355142,1.29214146584111,0.727067458955011,1.78248689192361,0.632073515871632,1.05418608574999,1.03135543248187,16.000661470428,5.221771726908,14.4881725836685,15.8609405923378,14.3645589250242,11.7723419617367,10.2020392773315,5.78483403317739,0,0,0.220528398054962,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,1.1659233465194,0.370850604021019,0.170870880797853,1.23832120777933,0.370389054739423,0,0.136694227721025,0,0,0.279902904647316,0.276399947608848,1.90934123603023,1.26534397432454,0.609958401380546,1.40406943068342,0.209088296014469,0.655087691238533,0.944050424693745,0.991841468704031,0.523511883968059,3.75883422546199,1.24267862617385,0,0.747582730219894,0.496375471371293,0.777804753376191,1.29159823477731,0.844780627453891,1.29092962510329,0.651021924219751,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.102710957164827,0.389762468933385,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.386379188064381,1.31377732815827,5.49454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,1.02440163452481,0.486213434136588,0,0.367687016900028,0.666740183404846,1.44224540067226,1.28367683836726,0.758091635291392,0.50695859978048,0.754505365544305,1.03005658216871,1.15245274328765,0.689225627467359,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0.789209134313529,0.814824683075171,0,1.30498519936592,0.492522411877817,0.818462086339379,1.08455788830176,0.964533054905707,0.749431733813838,0.467863216890817,0.429742108096597,0.57386499620653,0,0.231867835620421 | |||
|short_description=p3@Rph3al | |||
}} |
Revision as of 00:06, 4 August 2015
Short description: | p3@Rph3al |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rph3al_5end |
Coexpression cluster: | MCL_coexpression_mm9:477 |
Association with transcript: | 0bp_to_ENSMUST00000121287_5end |
EntrezGene: | 380714 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.10e-12 | 8 |
gland of diencephalon | 2.10e-12 | 8 |
neuroendocrine gland | 2.10e-12 | 8 |
diencephalon | 1.82e-09 | 10 |
future diencephalon | 1.82e-09 | 10 |
adrenal gland | 4.26e-08 | 7 |
adrenal/interrenal gland | 4.26e-08 | 7 |
lung | 1.50e-07 | 14 |
respiratory tube | 1.50e-07 | 14 |
respiration organ | 1.50e-07 | 14 |
pair of lungs | 1.50e-07 | 14 |
lung primordium | 1.50e-07 | 14 |
lung bud | 1.50e-07 | 14 |