FFCP PHASE1:Mm9::chr2:129418768..129418782,+: Difference between revisions
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{{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=116|UniProt=P97797,Q6P6I8|association_with_transcript=-148bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end|description=CAGE_peak_11_at_Sirpa_5end|id=chr2:129418768..129418782,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,3.57e-07,4;CL:0000766,3.57e-07,4;CL:0000234,3.57e-07,4;CL:0000576,3.57e-07,4;CL:0000235,3.57e-07,4;CL:0000864,3.57e-07,4;CL:0002009,3.57e-07,4;CL:0000040,3.57e-07,4;CL:0000559,3.57e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.47e-09!50;UBERON:0006238!6.47e-09!50;UBERON:0001049!1.30e-08!52;UBERON:0005068!1.30e-08!52;UBERON:0006241!1.30e-08!52;UBERON:0007135!1.30e-08!52;UBERON:0002616!1.78e-08!49;UBERON:0002020!2.61e-07!34;UBERON:0000033!3.38e-07!63;UBERON:0001017!4.42e-07!73;UBERON:0005743!4.42e-07!73;UBERON:0004121!5.64e-07!102;UBERON:0000924!5.64e-07!102;UBERON:0006601!5.64e-07!102;UBERON:0000073!8.80e-07!75;UBERON:0001016!8.80e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.45e-12,54;UBERON:0001017,3.00e-11,73;UBERON:0000955,4.34e-11,47;UBERON:0006238,4.34e-11,47;UBERON:0001016,1.02e-10,75;UBERON:0002616,2.66e-10,46;UBERON:0001049,2.86e-10,52;UBERON:0005068,2.86e-10,52;UBERON:0006241,2.86e-10,52;UBERON:0007135,2.86e-10,52;UBERON:0004121,1.50e-09,95;UBERON:0000924,1.50e-09,95;UBERON:0006601,1.50e-09,95;UBERON:0003528,3.37e-09,29;UBERON:0002791,3.37e-09,29;UBERON:0001893,3.37e-09,29;UBERON:0003080,3.03e-08,40;UBERON:0002020,3.44e-08,34;UBERON:0002021,3.70e-08,10;UBERON:0000411,3.70e-08,10;UBERON:0001950,3.70e-08,10;UBERON:0002346,6.49e-08,64;UBERON:0003075,6.49e-08,64;UBERON:0007284,6.49e-08,64;UBERON:0002619,7.24e-08,17;UBERON:0002780,1.62e-07,39;UBERON:0001890,1.62e-07,39;UBERON:0006240,1.62e-07,39;UBERON:0000956,4.31e-07,21;UBERON:0001869,4.31e-07,21;UBERON:0000203,4.31e-07,21;UBERON:0010371,7.68e-07,73|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0,0.595303031057488,0.0992909512008853,0,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,13.393012183581,11.720030167857,4.71171369576418,16.4704816648684,23.2235464885872,14.5653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,1.09012578190223,1.97717564461025,2.3331587888914,0.55994568650145,0,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0.889294796111139,8.54904731417329,11.8663963508037,5.6838409195688,4.19440154725767,3.84218305321555,0.103689612308478,0,0.210324961351382,1.14260393761521,0.662605622854841,0.367472397644862,0.287536413054709,0,2.20231761998777,2.042997409363,1.38245879930619,0.527545150920775,1.00636407962651,1.04182674111352,1.3959149950069,0,1.22238598221448,0.589257170947335,0.854230084794618,0.372798891650601,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,3.10725460376606,0.742210695324124,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0.753999547978053,0,0.578397427679647,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,0,1.75668478206928,1.8850203613211,0,0,0,0.381210681219194,1.9472783122627,1.83000241127451,0.502617408451458,1.73824320192276,1.27857728665165,1.0389402227978,1.94689515681309,0.305518091550949,1.49288364732112,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0.374806898238915,1.55222022443409,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0.823128545631774,0.199034266818493,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.405344047729279,0,0.439100230582101,0.402619256281115,1.05144974282064,0.411618449517138,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,1.20588579876208,0,3.45235364940973,0.324270453550071,0.274561413188081,5.75072826109418,1.11642284300551,0.312037673114561,0.505157755894224,0,0,3.51031061316549,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0.975668239288994,0.945810864637146,0.8858587585951,0.797273843287435,1.3109065177259,1.38147985492716,3.03763023021174,10.5553898757491,13.053736411649,0.491764273019036,0.275936746304732,1.28440471990234,0.586058432961016,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,1.92792789853084,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0.517434735131018,0,0,0.713475270408282,0,0,0.704015124191131,0.63549621259146,0,1.6488625294148,0.807322133479528,0.422190474497091,0.477489376012546,0.656563598980245,0.291480836629851,1.48340241608408,1.02522528478712,1.23832120777933,2.40752885580625,0.565105371014073,0.546776910884101,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0,0.209088296014469,0.87345025498471,0.269728692769641,0.661227645802687,0.785267825952089,0,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0,0.205421914329655,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,1.58711268530648,0,0,0,0.386379188064381,1.31377732815827,0.549454872801795,1.07184189539533,1.00314420807073,1.12950368523413,2.30162618253588,2.29158205375759,3.09335728218638,2.05524755931193,3.7769694869485,4.05013500139084,0.900642406448441,1.35942722695261,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.640251524048693,0.516919220600519,1.42888107384922,0.115884325944855,0,0.412085900803307,0.441596760403192,0,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.271608227691724,1.12228454331548,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.882365676478062,0.231867835620421|short_description=p11@Sirpa}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19261 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97797,uniprot:Q6P6I8 | |||
|association_with_transcript=-148bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end | |||
|cluster_id=chr2:129418768..129418782,+ | |||
|description=CAGE_peak_11_at_Sirpa_5end | |||
|id=chr2:129418768..129418782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.57e-07,4;CL:0000766,3.57e-07,4;CL:0000234,3.57e-07,4;CL:0000576,3.57e-07,4;CL:0000235,3.57e-07,4;CL:0000864,3.57e-07,4;CL:0002009,3.57e-07,4;CL:0000040,3.57e-07,4;CL:0000559,3.57e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.47e-09!50;UBERON:0006238!6.47e-09!50;UBERON:0001049!1.30e-08!52;UBERON:0005068!1.30e-08!52;UBERON:0006241!1.30e-08!52;UBERON:0007135!1.30e-08!52;UBERON:0002616!1.78e-08!49;UBERON:0002020!2.61e-07!34;UBERON:0000033!3.38e-07!63;UBERON:0001017!4.42e-07!73;UBERON:0005743!4.42e-07!73;UBERON:0004121!5.64e-07!102;UBERON:0000924!5.64e-07!102;UBERON:0006601!5.64e-07!102;UBERON:0000073!8.80e-07!75;UBERON:0001016!8.80e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.45e-12,54;UBERON:0001017,3.00e-11,73;UBERON:0000955,4.34e-11,47;UBERON:0006238,4.34e-11,47;UBERON:0001016,1.02e-10,75;UBERON:0002616,2.66e-10,46;UBERON:0001049,2.86e-10,52;UBERON:0005068,2.86e-10,52;UBERON:0006241,2.86e-10,52;UBERON:0007135,2.86e-10,52;UBERON:0004121,1.50e-09,95;UBERON:0000924,1.50e-09,95;UBERON:0006601,1.50e-09,95;UBERON:0003528,3.37e-09,29;UBERON:0002791,3.37e-09,29;UBERON:0001893,3.37e-09,29;UBERON:0003080,3.03e-08,40;UBERON:0002020,3.44e-08,34;UBERON:0002021,3.70e-08,10;UBERON:0000411,3.70e-08,10;UBERON:0001950,3.70e-08,10;UBERON:0002346,6.49e-08,64;UBERON:0003075,6.49e-08,64;UBERON:0007284,6.49e-08,64;UBERON:0002619,7.24e-08,17;UBERON:0002780,1.62e-07,39;UBERON:0001890,1.62e-07,39;UBERON:0006240,1.62e-07,39;UBERON:0000956,4.31e-07,21;UBERON:0001869,4.31e-07,21;UBERON:0000203,4.31e-07,21;UBERON:0010371,7.68e-07,73 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.548457734422955,0,0.595303031057488,0.0992909512008853,0,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0,13.393012183581,11.720030167857,4.71171369576418,16.4704816648684,23.2235464885872,14.5653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,1.09012578190223,1.97717564461025,2.3331587888914,0.55994568650145,0,0,0,0,0,0.286533439938757,0.515672092277442,0.606949382578793,1.05798195854407,0,0,0.889294796111139,8.54904731417329,11.8663963508037,5.6838409195688,4.19440154725767,3.84218305321555,0.103689612308478,0,0.210324961351382,1.14260393761521,0.662605622854841,0.367472397644862,0.287536413054709,0,2.20231761998777,2.042997409363,1.38245879930619,0.527545150920775,1.00636407962651,1.04182674111352,1.3959149950069,0,1.22238598221448,0.589257170947335,0.854230084794618,0.372798891650601,0,0.453429360640713,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,3.10725460376606,0.742210695324124,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0.753999547978053,0,0.578397427679647,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,0,1.75668478206928,1.8850203613211,0,0,0,0.381210681219194,1.9472783122627,1.83000241127451,0.502617408451458,1.73824320192276,1.27857728665165,1.0389402227978,1.94689515681309,0.305518091550949,1.49288364732112,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.384341160854549,0.374806898238915,1.55222022443409,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0,0.823128545631774,0.199034266818493,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.405344047729279,0,0.439100230582101,0.402619256281115,1.05144974282064,0.411618449517138,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0,0.156998727841375,0.370191491765402,0,0.166845105716094,0.196558995113203,0.224862112384854,0.811440485554012,1.20588579876208,0,3.45235364940973,0.324270453550071,0.274561413188081,5.75072826109418,1.11642284300551,0.312037673114561,0.505157755894224,0,0,3.51031061316549,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0.975668239288994,0.945810864637146,0.8858587585951,0.797273843287435,1.3109065177259,1.38147985492716,3.03763023021174,10.5553898757491,13.053736411649,0.491764273019036,0.275936746304732,1.28440471990234,0.586058432961016,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0,0,1.92792789853084,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0.517434735131018,0,0,0.713475270408282,0,0,0.704015124191131,0.63549621259146,0,1.6488625294148,0.807322133479528,0.422190474497091,0.477489376012546,0.656563598980245,0.291480836629851,1.48340241608408,1.02522528478712,1.23832120777933,2.40752885580625,0.565105371014073,0.546776910884101,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0,0.209088296014469,0.87345025498471,0.269728692769641,0.661227645802687,0.785267825952089,0,1.24267862617385,0,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0,0.205421914329655,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,1.58711268530648,0,0,0,0.386379188064381,1.31377732815827,0.549454872801795,1.07184189539533,1.00314420807073,1.12950368523413,2.30162618253588,2.29158205375759,3.09335728218638,2.05524755931193,3.7769694869485,4.05013500139084,0.900642406448441,1.35942722695261,0.51776031175182,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.640251524048693,0.516919220600519,1.42888107384922,0.115884325944855,0,0.412085900803307,0.441596760403192,0,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.169229215783353,0,0.526139422875686,0.271608227691724,1.12228454331548,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.578719832943424,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p11@Sirpa | |||
}} |
Revision as of 00:56, 4 August 2015
Short description: | p11@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -148bp_to_NM_001177647, NM_007547, uc008mia.2, uc008mib.2_5end |
EntrezGene: | 19261 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.57e-07 | 4 |
myeloid leukocyte | 3.57e-07 | 4 |
phagocyte | 3.57e-07 | 4 |
monocyte | 3.57e-07 | 4 |
macrophage | 3.57e-07 | 4 |
tissue-resident macrophage | 3.57e-07 | 4 |
macrophage dendritic cell progenitor | 3.57e-07 | 4 |
monoblast | 3.57e-07 | 4 |
promonocyte | 3.57e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.45e-12 | 54 |
central nervous system | 3.00e-11 | 73 |
brain | 4.34e-11 | 47 |
future brain | 4.34e-11 | 47 |
nervous system | 1.02e-10 | 75 |
regional part of brain | 2.66e-10 | 46 |
neural tube | 2.86e-10 | 52 |
neural rod | 2.86e-10 | 52 |
future spinal cord | 2.86e-10 | 52 |
neural keel | 2.86e-10 | 52 |
ectoderm-derived structure | 1.50e-09 | 95 |
ectoderm | 1.50e-09 | 95 |
presumptive ectoderm | 1.50e-09 | 95 |
brain grey matter | 3.37e-09 | 29 |
regional part of telencephalon | 3.37e-09 | 29 |
telencephalon | 3.37e-09 | 29 |
anterior neural tube | 3.03e-08 | 40 |
gray matter | 3.44e-08 | 34 |
occipital lobe | 3.70e-08 | 10 |
visual cortex | 3.70e-08 | 10 |
neocortex | 3.70e-08 | 10 |
neurectoderm | 6.49e-08 | 64 |
neural plate | 6.49e-08 | 64 |
presumptive neural plate | 6.49e-08 | 64 |
regional part of cerebral cortex | 7.24e-08 | 17 |
regional part of forebrain | 1.62e-07 | 39 |
forebrain | 1.62e-07 | 39 |
future forebrain | 1.62e-07 | 39 |
cerebral cortex | 4.31e-07 | 21 |
cerebral hemisphere | 4.31e-07 | 21 |
pallium | 4.31e-07 | 21 |
ecto-epithelium | 7.68e-07 | 73 |