FFCP PHASE1:Mm9::chr16:84774135..84774149,+: Difference between revisions
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{{FFCP|EntrezGene=67374|HGNC=|MCL_coexpression_id=194|UniProt=Q9JI59,Q9CWD9|association_with_transcript=-218bp_to_ENSMUST00000114195,NM_023844,uc007ztf.1,uc007ztg.1_5end|description=CAGE_peak_8_at_Jam2_5end|id=chr16:84774135..84774149,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,7.74e-19,1;CL:0002078,7.74e-19,1;CL:0000115,7.74e-19,1;CL:0002262,7.74e-19,1;CL:1000398,7.74e-19,1;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0002453,1.32e-09,8;CL:0000333,7.02e-08,10;CL:0000095,7.02e-08,10;CL:0000243,7.02e-08,10;CL:0000123,7.02e-08,10;CL:0000125,7.02e-08,10;CL:0000030,7.02e-08,10;CL:0000339,7.02e-08,10;CL:0000215,3.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!2.23e-08!26;UBERON:0000990!2.23e-08!26;UBERON:0000474!4.81e-07!9;UBERON:0003133!5.48e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000993,5.15e-19,1;UBERON:0002394,7.74e-19,1;UBERON:0001281,7.74e-19,1;UBERON:0000353,7.74e-19,1;UBERON:0003497,7.74e-19,1;UBERON:0003909,7.74e-19,1;UBERON:0003928,7.74e-19,1;UBERON:0003835,7.74e-19,1;UBERON:0003513,7.74e-19,1;UBERON:0001280,7.74e-19,1;UBERON:0004647,7.74e-19,1;UBERON:0002294,7.74e-19,1;UBERON:0001173,7.74e-19,1;UBERON:0004912,7.74e-19,1;UBERON:0005171,7.74e-19,1;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11;UBERON:0005631,4.17e-07,3;UBERON:0000478,4.17e-07,3;UBERON:0000158,4.17e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0.65407546914134,0,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.659431438650969,0.182975287204819,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0.58489226135736,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0,21.1161757404845,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,2.58138878870081,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.704143431874524,0.5208175393758,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p8@Jam2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67374 | |||
|HGNC= | |||
|MCL_coexpression_id=194 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JI59,uniprot:Q9CWD9 | |||
|association_with_transcript=-218bp_to_ENSMUST00000114195,NM_023844,uc007ztf.1,uc007ztg.1_5end | |||
|cluster_id=chr16:84774135..84774149,+ | |||
|description=CAGE_peak_8_at_Jam2_5end | |||
|id=chr16:84774135..84774149,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.74e-19,1;CL:0002078,7.74e-19,1;CL:0000115,7.74e-19,1;CL:0002262,7.74e-19,1;CL:1000398,7.74e-19,1;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0002453,1.32e-09,8;CL:0000333,7.02e-08,10;CL:0000095,7.02e-08,10;CL:0000243,7.02e-08,10;CL:0000123,7.02e-08,10;CL:0000125,7.02e-08,10;CL:0000030,7.02e-08,10;CL:0000339,7.02e-08,10;CL:0000215,3.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!2.23e-08!26;UBERON:0000990!2.23e-08!26;UBERON:0000474!4.81e-07!9;UBERON:0003133!5.48e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000993,5.15e-19,1;UBERON:0002394,7.74e-19,1;UBERON:0001281,7.74e-19,1;UBERON:0000353,7.74e-19,1;UBERON:0003497,7.74e-19,1;UBERON:0003909,7.74e-19,1;UBERON:0003928,7.74e-19,1;UBERON:0003835,7.74e-19,1;UBERON:0003513,7.74e-19,1;UBERON:0001280,7.74e-19,1;UBERON:0004647,7.74e-19,1;UBERON:0002294,7.74e-19,1;UBERON:0001173,7.74e-19,1;UBERON:0004912,7.74e-19,1;UBERON:0005171,7.74e-19,1;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11;UBERON:0005631,4.17e-07,3;UBERON:0000478,4.17e-07,3;UBERON:0000158,4.17e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0.65407546914134,0,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,1.15265491596466,0,0,0,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.659431438650969,0.182975287204819,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0.58489226135736,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0.178065603667255,0,21.1161757404845,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,2.58138878870081,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.41326727862668,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.704143431874524,0.5208175393758,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p8@Jam2 | |||
}} |
Revision as of 02:54, 4 August 2015
Short description: | p8@Jam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Jam2_5end |
Coexpression cluster: | MCL_coexpression_mm9:194 |
Association with transcript: | -218bp_to_ENSMUST00000114195, NM_023844, uc007ztf.1, uc007ztg.1_5end |
EntrezGene: | 67374 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.74e-19 | 1 |
meso-epithelial cell | 7.74e-19 | 1 |
endothelial cell | 7.74e-19 | 1 |
endothelial cell of sinusoid | 7.74e-19 | 1 |
endothelial cell of hepatic sinusoid | 7.74e-19 | 1 |
central nervous system macrophage | 7.56e-10 | 2 |
microglial cell | 7.56e-10 | 2 |
oligodendrocyte precursor cell | 1.32e-09 | 8 |
migratory neural crest cell | 7.02e-08 | 10 |
neuron associated cell | 7.02e-08 | 10 |
glial cell (sensu Vertebrata) | 7.02e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 7.02e-08 | 10 |
glial cell | 7.02e-08 | 10 |
glioblast | 7.02e-08 | 10 |
glioblast (sensu Vertebrata) | 7.02e-08 | 10 |
barrier cell | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
oviduct | 5.15e-19 | 1 |
bile duct | 7.74e-19 | 1 |
hepatic sinusoid | 7.74e-19 | 1 |
parenchyma | 7.74e-19 | 1 |
abdomen blood vessel | 7.74e-19 | 1 |
sinusoid | 7.74e-19 | 1 |
digestive system duct | 7.74e-19 | 1 |
abdominal segment blood vessel | 7.74e-19 | 1 |
trunk blood vessel | 7.74e-19 | 1 |
liver parenchyma | 7.74e-19 | 1 |
liver lobule | 7.74e-19 | 1 |
biliary system | 7.74e-19 | 1 |
biliary tree | 7.74e-19 | 1 |
biliary bud | 7.74e-19 | 1 |
hepatic duct | 7.74e-19 | 1 |
placenta | 5.06e-10 | 2 |
chorion | 5.06e-10 | 2 |
allantois | 5.06e-10 | 2 |
female reproductive system | 7.68e-09 | 9 |
female organism | 2.08e-07 | 11 |
extraembryonic membrane | 4.17e-07 | 3 |
extraembryonic structure | 4.17e-07 | 3 |
membranous layer | 4.17e-07 | 3 |