FFCP PHASE1:Mm9::chr2:135484895..135484910,+: Difference between revisions
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{{FFCP|EntrezGene=18798|HGNC=|MCL_coexpression_id=1964|UniProt=|association_with_transcript=148bp_to_ENSMUST00000144931_5end|description=CAGE_peak_7_at_Plcb4_5end|id=chr2:135484895..135484910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.00e-11!63;UBERON:0002346!1.71e-09!71;UBERON:0003075!1.71e-09!71;UBERON:0007284!1.71e-09!71;UBERON:0004121!3.65e-09!102;UBERON:0000924!3.65e-09!102;UBERON:0006601!3.65e-09!102;UBERON:0001017!4.39e-08!73;UBERON:0005743!4.39e-08!73;UBERON:0003103!4.59e-08!43;UBERON:0001049!5.98e-08!52;UBERON:0005068!5.98e-08!52;UBERON:0006241!5.98e-08!52;UBERON:0007135!5.98e-08!52;UBERON:0000073!9.64e-08!75;UBERON:0001016!9.64e-08!75;UBERON:0004111!1.60e-07!122;UBERON:0003056!6.45e-07!49;UBERON:0000489!9.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.91e-11,12;UBERON:0003057,4.91e-11,12;UBERON:0004733,1.60e-10,6;UBERON:0004732,1.60e-10,6;UBERON:0002028,1.60e-10,6;UBERON:0007277,1.60e-10,6;UBERON:0002346,5.19e-10,64;UBERON:0003075,5.19e-10,64;UBERON:0007284,5.19e-10,64;UBERON:0004121,3.56e-09,95;UBERON:0000924,3.56e-09,95;UBERON:0006601,3.56e-09,95;UBERON:0001896,1.95e-08,2;UBERON:0002298,1.95e-08,2;UBERON:0005290,1.95e-08,2;UBERON:0010096,1.95e-08,2;UBERON:0010371,2.01e-08,73;UBERON:0010314,3.38e-08,92;UBERON:0001444,8.69e-08,11;UBERON:0000073,9.37e-08,54;UBERON:0001049,8.54e-07,52;UBERON:0005068,8.54e-07,52;UBERON:0006241,8.54e-07,52;UBERON:0007135,8.54e-07,52|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0.809265843438391,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,2.93680877595932,1.22885226604995,0.263772575460388,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,0.61119299110724,0.883885756421003,1.56608848879013,0.931997229126503,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,5.5628351432194,6.28340120440365,0.255457055208591,0.359445373517761,0,0.381210681219194,1.64769703345305,2.28750301409313,0.251308704225729,0,0.255715457330331,1.87009240103604,2.27137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.05220927943237,0.520481771850815,0.229902104433473,0.540186389416048,0.452114453507145,1.36072998302656,1.0249097622788,0.655912071918102,1.03481348295606,0.215567992932842,0.378212160335639,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.164167464079095,1.13496333364198,1.31579988682799,0.439100230582101,0.805238512562231,0,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0.456994050438915,0,0.814605311381257,1.35766741017338,0.561086559122548,1.01178459398812,1.18088118383682,0.470996183524124,0.740382983530803,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0,0.275936746304732,1.44495530989013,2.81308047821288,0.163934945376675,0.504941854408746,0,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,3.52308073819968,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0.330613822901344,0,0.518459893167171,7.45607175704311,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18798 | |||
|HGNC= | |||
|MCL_coexpression_id=1964 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=148bp_to_ENSMUST00000144931_5end | |||
|cluster_id=chr2:135484895..135484910,+ | |||
|description=CAGE_peak_7_at_Plcb4_5end | |||
|id=chr2:135484895..135484910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.00e-11!63;UBERON:0002346!1.71e-09!71;UBERON:0003075!1.71e-09!71;UBERON:0007284!1.71e-09!71;UBERON:0004121!3.65e-09!102;UBERON:0000924!3.65e-09!102;UBERON:0006601!3.65e-09!102;UBERON:0001017!4.39e-08!73;UBERON:0005743!4.39e-08!73;UBERON:0003103!4.59e-08!43;UBERON:0001049!5.98e-08!52;UBERON:0005068!5.98e-08!52;UBERON:0006241!5.98e-08!52;UBERON:0007135!5.98e-08!52;UBERON:0000073!9.64e-08!75;UBERON:0001016!9.64e-08!75;UBERON:0004111!1.60e-07!122;UBERON:0003056!6.45e-07!49;UBERON:0000489!9.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.91e-11,12;UBERON:0003057,4.91e-11,12;UBERON:0004733,1.60e-10,6;UBERON:0004732,1.60e-10,6;UBERON:0002028,1.60e-10,6;UBERON:0007277,1.60e-10,6;UBERON:0002346,5.19e-10,64;UBERON:0003075,5.19e-10,64;UBERON:0007284,5.19e-10,64;UBERON:0004121,3.56e-09,95;UBERON:0000924,3.56e-09,95;UBERON:0006601,3.56e-09,95;UBERON:0001896,1.95e-08,2;UBERON:0002298,1.95e-08,2;UBERON:0005290,1.95e-08,2;UBERON:0010096,1.95e-08,2;UBERON:0010371,2.01e-08,73;UBERON:0010314,3.38e-08,92;UBERON:0001444,8.69e-08,11;UBERON:0000073,9.37e-08,54;UBERON:0001049,8.54e-07,52;UBERON:0005068,8.54e-07,52;UBERON:0006241,8.54e-07,52;UBERON:0007135,8.54e-07,52 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0,0.777719596297134,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0.809265843438391,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,0,2.93680877595932,1.22885226604995,0.263772575460388,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,0.61119299110724,0.883885756421003,1.56608848879013,0.931997229126503,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,5.5628351432194,6.28340120440365,0.255457055208591,0.359445373517761,0,0.381210681219194,1.64769703345305,2.28750301409313,0.251308704225729,0,0.255715457330331,1.87009240103604,2.27137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.05220927943237,0.520481771850815,0.229902104433473,0.540186389416048,0.452114453507145,1.36072998302656,1.0249097622788,0.655912071918102,1.03481348295606,0.215567992932842,0.378212160335639,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.164167464079095,1.13496333364198,1.31579988682799,0.439100230582101,0.805238512562231,0,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0.189667900953082,0.456994050438915,0,0.814605311381257,1.35766741017338,0.561086559122548,1.01178459398812,1.18088118383682,0.470996183524124,0.740382983530803,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.345369963731791,0,0,0,0,0.275936746304732,1.44495530989013,2.81308047821288,0.163934945376675,0.504941854408746,0,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.0603129249281559,0,0.164140899745061,0.291480836629851,3.52308073819968,0,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0.330613822901344,0,0.518459893167171,7.45607175704311,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.39061315453185,0.943734099831398,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0.965947970160952,0.375364950902364,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.402048282689293,0.476293691283074,0.347652977834566,0.578727661391115,0,0.735994600671987,0,0,0.715308569841963,0.290692833264657,0.0941093804153306,0.25384382367503,0.73171189149109,0,0.407412341537585,0,0.355905054372522,0.0985044823755635,0,0.464810523557898,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Plcb4 | |||
}} |
Revision as of 03:28, 4 August 2015
Short description: | p7@Plcb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Plcb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1964 |
Association with transcript: | 148bp_to_ENSMUST00000144931_5end |
EntrezGene: | 18798 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 4.91e-11 | 12 |
chordal neural plate | 4.91e-11 | 12 |
segmental subdivision of hindbrain | 1.60e-10 | 6 |
segmental subdivision of nervous system | 1.60e-10 | 6 |
hindbrain | 1.60e-10 | 6 |
presumptive hindbrain | 1.60e-10 | 6 |
neurectoderm | 5.19e-10 | 64 |
neural plate | 5.19e-10 | 64 |
presumptive neural plate | 5.19e-10 | 64 |
ectoderm-derived structure | 3.56e-09 | 95 |
ectoderm | 3.56e-09 | 95 |
presumptive ectoderm | 3.56e-09 | 95 |
medulla oblongata | 1.95e-08 | 2 |
brainstem | 1.95e-08 | 2 |
myelencephalon | 1.95e-08 | 2 |
future myelencephalon | 1.95e-08 | 2 |
ecto-epithelium | 2.01e-08 | 73 |
structure with developmental contribution from neural crest | 3.38e-08 | 92 |
subdivision of head | 8.69e-08 | 11 |
regional part of nervous system | 9.37e-08 | 54 |
neural tube | 8.54e-07 | 52 |
neural rod | 8.54e-07 | 52 |
future spinal cord | 8.54e-07 | 52 |
neural keel | 8.54e-07 | 52 |