FFCP PHASE1:Mm9::chr11:8368453..8368462,-: Difference between revisions
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{{FFCP|EntrezGene=319939|HGNC=|MCL_coexpression_id=310|UniProt=Q5SSZ5|association_with_transcript=43bp_to_uc007hzj.1_5end|description=CAGE_peak_9_at_Tns3_5end|id=chr11:8368453..8368462,-|ontology_enrichment_celltype=CL:0000333!1.68e-10!10;CL:0000095!1.68e-10!10;CL:0000243!1.68e-10!10;CL:0000123!1.68e-10!10;CL:0000125!1.68e-10!10;CL:0000030!1.68e-10!10;CL:0000339!1.68e-10!10;CL:0002453!8.07e-09!8;CL:0000128!1.76e-07!6;CL:0000126!1.76e-07!6;CL:0000127!1.76e-07!6|ontology_enrichment_celltype_v019_2=CL:0000128,2.27e-24,6;CL:0000126,2.27e-24,6;CL:0000127,2.27e-24,6;CL:0000333,1.47e-20,10;CL:0000095,1.47e-20,10;CL:0000243,1.47e-20,10;CL:0000123,1.47e-20,10;CL:0000125,1.47e-20,10;CL:0000030,1.47e-20,10;CL:0000339,1.47e-20,10;CL:0002453,2.85e-18,8;CL:0002605,1.05e-12,2;CL:0002604,1.05e-12,2;CL:0000680,7.91e-09,6;CL:0000187,7.91e-09,6;CL:0000056,7.91e-09,6;CL:0002494,2.81e-08,3;CL:0000737,2.81e-08,3;CL:0000746,2.81e-08,3;CL:0000513,2.81e-08,3;CL:0000222,1.23e-07,7;CL:0002321,8.70e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!7.13e-11!114;UBERON:0004111!8.26e-11!122;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002048!2.48e-08!14;UBERON:0000117!2.48e-08!14;UBERON:0000171!2.48e-08!14;UBERON:0000170!2.48e-08!14;UBERON:0005597!2.48e-08!14;UBERON:0000118!2.48e-08!14;UBERON:0001017!2.31e-07!73;UBERON:0005743!2.31e-07!73;UBERON:0005153!3.38e-07!17;UBERON:0005178!3.42e-07!17;UBERON:0005181!3.42e-07!17;UBERON:0002224!3.42e-07!17;UBERON:0000915!3.42e-07!17;UBERON:0008947!3.42e-07!17;UBERON:0003258!3.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.44e-13,14;UBERON:0000117,1.44e-13,14;UBERON:0000171,1.44e-13,14;UBERON:0000170,1.44e-13,14;UBERON:0005597,1.44e-13,14;UBERON:0000118,1.44e-13,14;UBERON:0005153,4.09e-11,17;UBERON:0005178,4.09e-11,17;UBERON:0005181,4.09e-11,17;UBERON:0002224,4.09e-11,17;UBERON:0000915,4.09e-11,17;UBERON:0008947,4.09e-11,17;UBERON:0003258,4.09e-11,17;UBERON:0005157,2.15e-09,20|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.72340783073175,0,0.782391344348039,23.5467168890882,12.5221124158649,32.6642230444796,16.2384249085421,17.2503077237966,0,0,0,0.257259436035947,1.14613375975503,6.18806510732931,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,1.06958773443767,0,0,0,1.74170244666323,0.529000920747499,0,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,0.449371918214468,0,0.125654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.648965052271031,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.167506257441816,1.19021820443007,0.585400943573396,1.10344600874334,3.98636441367795,4.62418829106713,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0,0.481651769963376,0.468846746368813,0.327869890753351,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p9@Tns3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319939 | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SSZ5 | |||
|association_with_transcript=43bp_to_uc007hzj.1_5end | |||
|cluster_id=chr11:8368453..8368462,- | |||
|description=CAGE_peak_9_at_Tns3_5end | |||
|id=chr11:8368453..8368462,- | |||
|ontology_enrichment_celltype=CL:0000333!1.68e-10!10;CL:0000095!1.68e-10!10;CL:0000243!1.68e-10!10;CL:0000123!1.68e-10!10;CL:0000125!1.68e-10!10;CL:0000030!1.68e-10!10;CL:0000339!1.68e-10!10;CL:0002453!8.07e-09!8;CL:0000128!1.76e-07!6;CL:0000126!1.76e-07!6;CL:0000127!1.76e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.27e-24,6;CL:0000126,2.27e-24,6;CL:0000127,2.27e-24,6;CL:0000333,1.47e-20,10;CL:0000095,1.47e-20,10;CL:0000243,1.47e-20,10;CL:0000123,1.47e-20,10;CL:0000125,1.47e-20,10;CL:0000030,1.47e-20,10;CL:0000339,1.47e-20,10;CL:0002453,2.85e-18,8;CL:0002605,1.05e-12,2;CL:0002604,1.05e-12,2;CL:0000680,7.91e-09,6;CL:0000187,7.91e-09,6;CL:0000056,7.91e-09,6;CL:0002494,2.81e-08,3;CL:0000737,2.81e-08,3;CL:0000746,2.81e-08,3;CL:0000513,2.81e-08,3;CL:0000222,1.23e-07,7;CL:0002321,8.70e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!7.13e-11!114;UBERON:0004111!8.26e-11!122;UBERON:0000073!2.16e-08!75;UBERON:0001016!2.16e-08!75;UBERON:0002048!2.48e-08!14;UBERON:0000117!2.48e-08!14;UBERON:0000171!2.48e-08!14;UBERON:0000170!2.48e-08!14;UBERON:0005597!2.48e-08!14;UBERON:0000118!2.48e-08!14;UBERON:0001017!2.31e-07!73;UBERON:0005743!2.31e-07!73;UBERON:0005153!3.38e-07!17;UBERON:0005178!3.42e-07!17;UBERON:0005181!3.42e-07!17;UBERON:0002224!3.42e-07!17;UBERON:0000915!3.42e-07!17;UBERON:0008947!3.42e-07!17;UBERON:0003258!3.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.44e-13,14;UBERON:0000117,1.44e-13,14;UBERON:0000171,1.44e-13,14;UBERON:0000170,1.44e-13,14;UBERON:0005597,1.44e-13,14;UBERON:0000118,1.44e-13,14;UBERON:0005153,4.09e-11,17;UBERON:0005178,4.09e-11,17;UBERON:0005181,4.09e-11,17;UBERON:0002224,4.09e-11,17;UBERON:0000915,4.09e-11,17;UBERON:0008947,4.09e-11,17;UBERON:0003258,4.09e-11,17;UBERON:0005157,2.15e-09,20 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.72340783073175,0,0.782391344348039,23.5467168890882,12.5221124158649,32.6642230444796,16.2384249085421,17.2503077237966,0,0,0,0.257259436035947,1.14613375975503,6.18806510732931,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,1.06958773443767,0,0,0,1.74170244666323,0.529000920747499,0,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,0.449371918214468,0,0.125654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.648965052271031,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.465067889500816,0.804820204198858,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.167506257441816,1.19021820443007,0.585400943573396,1.10344600874334,3.98636441367795,4.62418829106713,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0,0.481651769963376,0.468846746368813,0.327869890753351,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p9@Tns3 | |||
}} |
Revision as of 04:56, 4 August 2015
Short description: | p9@Tns3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Tns3_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | 43bp_to_uc007hzj.1_5end |
EntrezGene: | 319939 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.27e-24 | 6 |
macroglial cell | 2.27e-24 | 6 |
astrocyte | 2.27e-24 | 6 |
migratory neural crest cell | 1.47e-20 | 10 |
neuron associated cell | 1.47e-20 | 10 |
glial cell (sensu Vertebrata) | 1.47e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 1.47e-20 | 10 |
glial cell | 1.47e-20 | 10 |
glioblast | 1.47e-20 | 10 |
glioblast (sensu Vertebrata) | 1.47e-20 | 10 |
oligodendrocyte precursor cell | 2.85e-18 | 8 |
astrocyte of the cerebral cortex | 1.05e-12 | 2 |
astrocyte of the hippocampus | 1.05e-12 | 2 |
muscle precursor cell | 7.91e-09 | 6 |
muscle cell | 7.91e-09 | 6 |
myoblast | 7.91e-09 | 6 |
cardiocyte | 2.81e-08 | 3 |
striated muscle cell | 2.81e-08 | 3 |
cardiac muscle cell | 2.81e-08 | 3 |
cardiac muscle myoblast | 2.81e-08 | 3 |
mesodermal cell | 1.23e-07 | 7 |
embryonic cell | 8.70e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
lung | 1.44e-13 | 14 |
respiratory tube | 1.44e-13 | 14 |
respiration organ | 1.44e-13 | 14 |
pair of lungs | 1.44e-13 | 14 |
lung primordium | 1.44e-13 | 14 |
lung bud | 1.44e-13 | 14 |
epithelial bud | 4.09e-11 | 17 |
thoracic cavity element | 4.09e-11 | 17 |
thoracic segment organ | 4.09e-11 | 17 |
thoracic cavity | 4.09e-11 | 17 |
thoracic segment of trunk | 4.09e-11 | 17 |
respiratory primordium | 4.09e-11 | 17 |
endoderm of foregut | 4.09e-11 | 17 |
epithelial fold | 2.15e-09 | 20 |