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FFCP PHASE1:Mm9::chr2:146337728..146337751,-: Difference between revisions

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{{FFCP|EntrezGene=241694|HGNC=|MCL_coexpression_id=181|UniProt=A3KGS3,B1AYA6,B2RX86|association_with_transcript=0bp_to_ENSMUST00000109986,ENSMUST00000135974,NM_001033348,uc008msj.2,uc008msm.1,uc008msn.1_5end|description=CAGE_peak_2_at_Ralgapa2_5end|id=chr2:146337728..146337751,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!4.98e-10!69;UBERON:0003914!5.53e-10!47;UBERON:0000466!4.41e-08!79;UBERON:0002107!4.60e-08!22;UBERON:0007499!4.60e-08!22;UBERON:0006925!4.60e-08!22;UBERON:0009497!4.60e-08!22;UBERON:0000015!4.60e-08!22;UBERON:0002423!4.60e-08!22;UBERON:0006235!4.60e-08!22;UBERON:0008835!4.60e-08!22;UBERON:0003894!4.60e-08!22;UBERON:0004161!4.60e-08!22;UBERON:0008836!4.60e-08!22;UBERON:0004921!6.23e-08!126;UBERON:0004185!6.23e-08!126;UBERON:0001048!9.54e-08!147;UBERON:0001007!1.26e-07!128;UBERON:0001555!1.26e-07!128;UBERON:0007026!1.26e-07!128;UBERON:0009569!1.59e-07!66;UBERON:0002365!2.49e-07!25;UBERON:0002330!2.49e-07!25;UBERON:0002048!3.16e-07!14;UBERON:0000117!3.16e-07!14;UBERON:0000171!3.16e-07!14;UBERON:0000170!3.16e-07!14;UBERON:0005597!3.16e-07!14;UBERON:0000118!3.16e-07!14;UBERON:0004119!4.18e-07!130;UBERON:0000925!4.18e-07!130;UBERON:0006595!4.18e-07!130;UBERON:0009854!4.62e-07!23;UBERON:0009856!4.62e-07!23;UBERON:0001041!7.25e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.28e-11,47;UBERON:0005911,6.60e-10,69;UBERON:0002107,8.87e-09,22;UBERON:0007499,8.87e-09,22;UBERON:0006925,8.87e-09,22;UBERON:0009497,8.87e-09,22;UBERON:0000015,8.87e-09,22;UBERON:0002423,8.87e-09,22;UBERON:0006235,8.87e-09,22;UBERON:0008835,8.87e-09,22;UBERON:0003894,8.87e-09,22;UBERON:0004161,8.87e-09,22;UBERON:0008836,8.87e-09,22;UBERON:0002365,2.58e-08,25;UBERON:0002330,2.58e-08,25;UBERON:0002048,4.79e-08,14;UBERON:0000117,4.79e-08,14;UBERON:0000171,4.79e-08,14;UBERON:0000170,4.79e-08,14;UBERON:0005597,4.79e-08,14;UBERON:0000118,4.79e-08,14;UBERON:0009854,5.20e-08,23;UBERON:0009856,5.20e-08,23;UBERON:0001048,6.86e-08,134;UBERON:0009569,2.07e-07,66;UBERON:0005177,2.25e-07,79;UBERON:0005153,2.53e-07,17;UBERON:0004921,4.80e-07,114;UBERON:0001041,5.13e-07,80;UBERON:0001007,6.73e-07,116;UBERON:0001555,6.73e-07,116;UBERON:0007026,6.73e-07,116|phase1_expression=1.44133962394315,2.79180326111489,1.81999695755814,2.41971369045464,1.50268718983904,2.18243053485457,0.700837921786577,0.258246646883153,3.23814060948833,3.97909694747389,1.19852577757853,1.35612670292072,0.856003649656029,0.34968160967599,0.666219523631325,0.607425802169478,0,0.473193248037357,0.411343300817216,0,1.78590909317247,2.08510997521859,3.39559725880616,1.27993938234725,0,2.29692785646008,2.15380998079537,0.861884930743556,1.71021077510736,1.26015064879965,1.99557459589774,1.27006134691926,1.23012957516914,0,1.44425809875637,0.997407872150954,1.42918549383658,1.67412652294763,0.7813353445238,0.523523743973798,0,1.36609096991689,0,0.755380907853464,1.11514624341466,0,0,0.872100625521786,0,0.388859798148567,0.139986421625363,0,0.503347818173209,2.17608642603403,2.35265659399725,0.257259436035947,0.286533439938757,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.34796496001021,1.4850653216486,1.26194976810829,0.571301968807607,0,0.489963196859816,1.53352753629178,1.83843757322004,0,0.766124028511126,0.46081959976873,0.659431438650969,0.914876436024097,0.52091337055676,0.279182999001381,1.12552522006336,0.45839474333043,0.883885756421003,0.854230084794618,0.745597783301202,0.075726193333184,0.226714680320357,40.8708929069366,13.7667820317022,1.3599426674155,1.07940638327563,1.94932925234301,7.16843019355737,1.12355536105401,0.170430322578058,0,0,4.50698943285378,0,5.09610479413291,0,0.216491041011214,0.506719730950197,0,1.7127581957859,1.03575153458869,0.890652834388949,0.520455980298408,0.913396434936424,0.691846491768175,0.753613202763113,0.940709657085638,0.502666365318702,0.247194967734374,9.39895819979426,1.76922110389975,0.647067399789637,0.883366073841574,2.42437626567611,0,0.585561594023094,0.209446706813455,1.27728527604296,0.599075622529601,0,1.27070227073065,0.748953197024114,0,0.251308704225729,0.521472960576829,0,0.20778804455956,0.486723789203273,0.509196819251581,1.24406970610093,0.505445516867349,0.420883711772948,0.650602214813519,1.14951052216736,0.900310649026746,1.20563854268572,0.408218994907967,1.40925092313335,1.21812241927647,1.55222022443409,1.07783996466421,0.756424320671277,0.351902248327898,0,0.278047249225598,1.0447564995665,0.411564272815887,0.796137067273973,0,0.51469581422943,0.284163499395593,1.03562886267751,1.87620847984877,1.98068267607116,2.60419209143731,4.13204886669548,3.23960937063494,4.41814495025775,2.68273401399619,2.33530684734339,2.96207729844265,4.10418660197738,3.97237166774693,4.09359964790931,4.17145219052996,6.97873377553933,0,0.720332286654991,0.330418782983798,0,1.2797295032114,1.39342003116263,0.77320476793256,1.00841762311671,1.3342682630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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:241694
|HGNC=
|MCL_coexpression_id=181
|TSSclassifier=NA
|UniProt=uniprot:A3KGS3,uniprot:B1AYA6,uniprot:B2RX86
|association_with_transcript=0bp_to_ENSMUST00000109986,ENSMUST00000135974,NM_001033348,uc008msj.2,uc008msm.1,uc008msn.1_5end
|cluster_id=chr2:146337728..146337751,-
|description=CAGE_peak_2_at_Ralgapa2_5end
|id=chr2:146337728..146337751,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005911!4.98e-10!69;UBERON:0003914!5.53e-10!47;UBERON:0000466!4.41e-08!79;UBERON:0002107!4.60e-08!22;UBERON:0007499!4.60e-08!22;UBERON:0006925!4.60e-08!22;UBERON:0009497!4.60e-08!22;UBERON:0000015!4.60e-08!22;UBERON:0002423!4.60e-08!22;UBERON:0006235!4.60e-08!22;UBERON:0008835!4.60e-08!22;UBERON:0003894!4.60e-08!22;UBERON:0004161!4.60e-08!22;UBERON:0008836!4.60e-08!22;UBERON:0004921!6.23e-08!126;UBERON:0004185!6.23e-08!126;UBERON:0001048!9.54e-08!147;UBERON:0001007!1.26e-07!128;UBERON:0001555!1.26e-07!128;UBERON:0007026!1.26e-07!128;UBERON:0009569!1.59e-07!66;UBERON:0002365!2.49e-07!25;UBERON:0002330!2.49e-07!25;UBERON:0002048!3.16e-07!14;UBERON:0000117!3.16e-07!14;UBERON:0000171!3.16e-07!14;UBERON:0000170!3.16e-07!14;UBERON:0005597!3.16e-07!14;UBERON:0000118!3.16e-07!14;UBERON:0004119!4.18e-07!130;UBERON:0000925!4.18e-07!130;UBERON:0006595!4.18e-07!130;UBERON:0009854!4.62e-07!23;UBERON:0009856!4.62e-07!23;UBERON:0001041!7.25e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.28e-11,47;UBERON:0005911,6.60e-10,69;UBERON:0002107,8.87e-09,22;UBERON:0007499,8.87e-09,22;UBERON:0006925,8.87e-09,22;UBERON:0009497,8.87e-09,22;UBERON:0000015,8.87e-09,22;UBERON:0002423,8.87e-09,22;UBERON:0006235,8.87e-09,22;UBERON:0008835,8.87e-09,22;UBERON:0003894,8.87e-09,22;UBERON:0004161,8.87e-09,22;UBERON:0008836,8.87e-09,22;UBERON:0002365,2.58e-08,25;UBERON:0002330,2.58e-08,25;UBERON:0002048,4.79e-08,14;UBERON:0000117,4.79e-08,14;UBERON:0000171,4.79e-08,14;UBERON:0000170,4.79e-08,14;UBERON:0005597,4.79e-08,14;UBERON:0000118,4.79e-08,14;UBERON:0009854,5.20e-08,23;UBERON:0009856,5.20e-08,23;UBERON:0001048,6.86e-08,134;UBERON:0009569,2.07e-07,66;UBERON:0005177,2.25e-07,79;UBERON:0005153,2.53e-07,17;UBERON:0004921,4.80e-07,114;UBERON:0001041,5.13e-07,80;UBERON:0001007,6.73e-07,116;UBERON:0001555,6.73e-07,116;UBERON:0007026,6.73e-07,116
|phase1_expression=1.44133962394315,2.79180326111489,1.81999695755814,2.41971369045464,1.50268718983904,2.18243053485457,0.700837921786577,0.258246646883153,3.23814060948833,3.97909694747389,1.19852577757853,1.35612670292072,0.856003649656029,0.34968160967599,0.666219523631325,0.607425802169478,0,0.473193248037357,0.411343300817216,0,1.78590909317247,2.08510997521859,3.39559725880616,1.27993938234725,0,2.29692785646008,2.15380998079537,0.861884930743556,1.71021077510736,1.26015064879965,1.99557459589774,1.27006134691926,1.23012957516914,0,1.44425809875637,0.997407872150954,1.42918549383658,1.67412652294763,0.7813353445238,0.523523743973798,0,1.36609096991689,0,0.755380907853464,1.11514624341466,0,0,0.872100625521786,0,0.388859798148567,0.139986421625363,0,0.503347818173209,2.17608642603403,2.35265659399725,0.257259436035947,0.286533439938757,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.34796496001021,1.4850653216486,1.26194976810829,0.571301968807607,0,0.489963196859816,1.53352753629178,1.83843757322004,0,0.766124028511126,0.46081959976873,0.659431438650969,0.914876436024097,0.52091337055676,0.279182999001381,1.12552522006336,0.45839474333043,0.883885756421003,0.854230084794618,0.745597783301202,0.075726193333184,0.226714680320357,40.8708929069366,13.7667820317022,1.3599426674155,1.07940638327563,1.94932925234301,7.16843019355737,1.12355536105401,0.170430322578058,0,0,4.50698943285378,0,5.09610479413291,0,0.216491041011214,0.506719730950197,0,1.7127581957859,1.03575153458869,0.890652834388949,0.520455980298408,0.913396434936424,0.691846491768175,0.753613202763113,0.940709657085638,0.502666365318702,0.247194967734374,9.39895819979426,1.76922110389975,0.647067399789637,0.883366073841574,2.42437626567611,0,0.585561594023094,0.209446706813455,1.27728527604296,0.599075622529601,0,1.27070227073065,0.748953197024114,0,0.251308704225729,0.521472960576829,0,0.20778804455956,0.486723789203273,0.509196819251581,1.24406970610093,0.505445516867349,0.420883711772948,0.650602214813519,1.14951052216736,0.900310649026746,1.20563854268572,0.408218994907967,1.40925092313335,1.21812241927647,1.55222022443409,1.07783996466421,0.756424320671277,0.351902248327898,0,0.278047249225598,1.0447564995665,0.411564272815887,0.796137067273973,0,0.51469581422943,0.284163499395593,1.03562886267751,1.87620847984877,1.98068267607116,2.60419209143731,4.13204886669548,3.23960937063494,4.41814495025775,2.68273401399619,2.33530684734339,2.96207729844265,4.10418660197738,3.97237166774693,4.09359964790931,4.17145219052996,6.97873377553933,0,0.720332286654991,0.330418782983798,0,1.2797295032114,1.39342003116263,0.77320476793256,1.00841762311671,1.33426826306922,1.14135375667535,0.949058123089023,0.494096864172033,1.50801125280162,1.1937388322469,1.75467678407208,0.898819408654221,0.864552199498777,0.995706366271836,0.189667900953082,1.5994791765362,1.1270773567308,1.01825663922657,0.775809948670503,1.19230893813542,1.07502113111237,2.21415221969403,1.56998727841375,2.09775178667061,3.55743152504579,0.333690211432188,0.786235980452812,1.12431056192427,1.62288097110802,2.41177159752417,2.80088436959562,2.87696137450811,3.24270453550071,4.94210543738547,8.62609239164127,5.20997326735905,4.68056509671841,6.56705082662491,2.33216637578486,2.8946611281802,7.944387177164,1.13694847062291,1.46668478797823,2.20668611507745,1.40814148973101,2.68010011906905,4.76087281772027,5.85400943573396,5.99013547603526,2.21464689648775,5.26200736569707,5.73521601505083,5.52591941970866,5.06271705035291,0,0,0,1.10374698521893,0.321101179975584,0.703270119553219,0,1.26235463602186,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,0.668396022247182,0,0,0.584511715822624,1.18586333383957,0.642642632843614,0.851640511249612,0.178065603667255,0.162886959353576,0.824850614862677,1.32745138339963,0.485561272309963,0.604647113929502,0.754420319023592,0,0.614870295887855,1.03371317267288,2.54473610634254,1.06949213515416,2.52829406348653,2.10837217149998,2.06271086496374,1.02131881726136,0.720244376125241,1.03486947026204,1.07168517515796,0.532020700926821,0.713475270408282,1.64549020602121,0.608929898229199,0.704015124191131,0,2.42581237860458,1.15420377059036,0.968786560175433,1.32688434841943,0.954978752025092,0.656563598980245,0.874442509889552,0.556275906031529,0.854354403989263,1.44470807574256,1.48155621895769,1.13021074202815,1.50363650493128,0.457556346413045,1.86976272993241,1.53946597556024,2.21119958087078,0.954670618015114,0.474503990371703,1.82987520414164,1.08005340821801,0.627264888043406,1.09181281873089,1.34864346384821,1.81837602595739,1.30877970992015,1.68499465279331,2.4853572523477,0.56369293868419,1.49516546043979,0.827292452285488,0.777804753376191,1.03327858782185,1.18269287843545,1.87771581833206,3.1249052362548,3.04092098834561,1.20792060413003,2.59227005632079,1.26404448251271,0.608175645870493,0.410843828659309,0.389762468933385,0.716106782669926,0.993406773906324,0.480781798079875,0.590758108698309,0.403865799792591,0.457240839929999,1.10908803650525,0.779663045918019,0.962118416403295,1.63627663054197,0.226730383615211,0.443971906748129,0,0.167884616364078,2.12508553435409,0.375364950902364,0.549454872801795,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0,0,0,0,0.906284817968409,0.51776031175182,0.62272408550506,0,1.70733605754134,0.486213434136588,0.628839487883947,0.919217542250071,2.22246727801615,2.47242068686673,1.92551525755089,2.27427490587418,1.2673964994512,1.50901073108861,1.77918864192777,1.98477972455095,2.01024141344646,2.85776214769844,1.73826488917283,1.35036454324594,1.23625770240992,1.76638704161277,0.685738504770831,1.24233064311536,0.715308569841963,1.16277133305863,2.07040636913727,1.69229215783353,2.74391959309159,1.05227884575137,1.90125759384206,1.12228454331548,2.37270036248348,1.87158516513571,1.22769312950907,2.01417893541756,2.12197272079256,0,0.935726433781634,1.28922632428979,2.10417165275728,0,1.62307484934295
|short_description=p2@Ralgapa2
}}

Revision as of 05:07, 4 August 2015

Short description:p2@Ralgapa2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ralgapa2_5end
Coexpression cluster:MCL_coexpression_mm9:181
Association with transcript: 0bp_to_ENSMUST00000109986, ENSMUST00000135974, NM_001033348, uc008msj.2, uc008msm.1, uc008msn.1_5end
EntrezGene:241694
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ralgapa2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D26.98
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.28e-1147
endo-epithelium6.60e-1069
liver8.87e-0922
epithelial sac8.87e-0922
digestive gland8.87e-0922
epithelium of foregut-midgut junction8.87e-0922
anatomical boundary8.87e-0922
hepatobiliary system8.87e-0922
foregut-midgut junction8.87e-0922
hepatic diverticulum8.87e-0922
liver primordium8.87e-0922
septum transversum8.87e-0922
liver bud8.87e-0922
exocrine gland2.58e-0825
exocrine system2.58e-0825
lung4.79e-0814
respiratory tube4.79e-0814
respiration organ4.79e-0814
pair of lungs4.79e-0814
lung primordium4.79e-0814
lung bud4.79e-0814
digestive tract diverticulum5.20e-0823
sac5.20e-0823
primordium6.86e-08134
subdivision of trunk2.07e-0766
trunk region element2.25e-0779
epithelial bud2.53e-0717
subdivision of digestive tract4.80e-07114
foregut5.13e-0780
digestive system6.73e-07116
digestive tract6.73e-07116
primitive gut6.73e-07116
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