FFCP PHASE1:Mm9::chr14:41706597..41706608,-: Difference between revisions
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{{FFCP|EntrezGene=328381|HGNC=|MCL_coexpression_id=51|UniProt=A6X942|association_with_transcript=-42bp_to_ENSMUST00000096000_5end|description=CAGE_peak_1_at_Sh2d4b_5end|id=chr14:41706597..41706608,-|ontology_enrichment_celltype=CL:0000197!7.70e-10!2;CL:0002491!7.70e-10!2;CL:0000098!7.70e-10!2|ontology_enrichment_celltype_v019_2=CL:0000197,1.87e-17,2;CL:0002491,1.87e-17,2;CL:0000098,1.87e-17,2;CL:0002374,9.82e-10,1;CL:0000202,9.82e-10,1;CL:0000199,9.82e-10,1;CL:0000855,9.82e-10,1;CL:0000589,9.82e-10,1;CL:0000710,2.09e-09,1;CL:0002077,2.09e-09,1;CL:0005014,2.09e-09,1;CL:0002315,2.09e-09,1;CL:0002490,2.09e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!3.57e-33!23;UBERON:0000974!3.57e-33!23;UBERON:0004807!3.57e-33!23;UBERON:0005058!3.57e-33!23;UBERON:0003351!3.57e-33!23;UBERON:0009113!3.57e-33!23;UBERON:0003295!3.57e-33!23;UBERON:0009722!3.57e-33!23;UBERON:0005562!3.57e-33!23;UBERON:0007690!3.57e-33!23;UBERON:0006562!1.08e-31!24;UBERON:0003408!1.08e-31!24;UBERON:0001557!1.08e-31!24;UBERON:0001042!1.08e-31!24;UBERON:0008814!1.08e-31!24;UBERON:0009145!1.08e-31!24;UBERON:0000072!6.59e-28!27;UBERON:0004177!8.11e-26!29;UBERON:0000065!4.86e-23!41;UBERON:0001004!2.00e-22!42;UBERON:0000063!5.61e-21!35;UBERON:0002390!9.02e-16!45;UBERON:0003061!9.02e-16!45;UBERON:0002193!1.25e-14!48;UBERON:0005057!1.26e-13!51;UBERON:0000490!1.40e-13!66;UBERON:0005911!1.46e-12!69;UBERON:0003929!1.88e-12!55;UBERON:0002368!3.31e-11!60;UBERON:0007811!3.74e-11!86;UBERON:0002530!3.75e-10!65;UBERON:0000153!6.02e-10!94;UBERON:0003465!7.70e-10!2;UBERON:0008193!7.70e-10!2;UBERON:0000032!7.70e-10!2;UBERON:0005744!7.70e-10!2;UBERON:0008001!7.70e-10!2;UBERON:0007497!7.70e-10!2;UBERON:0009955!7.70e-10!2;UBERON:0003067!7.70e-10!2;UBERON:0002546!7.70e-10!2;UBERON:0007914!7.70e-10!2;UBERON:0003457!7.70e-10!2;UBERON:0004766!7.70e-10!2;UBERON:0005253!7.70e-10!2;UBERON:0002227!7.70e-10!2;UBERON:0001846!7.70e-10!2;UBERON:0003128!7.70e-10!2;UBERON:0002241!7.70e-10!2;UBERON:0002105!7.70e-10!2;UBERON:0001678!7.70e-10!2;UBERON:0003129!7.70e-10!2;UBERON:0001694!7.70e-10!2;UBERON:0004681!7.70e-10!2;UBERON:0001839!7.70e-10!2;UBERON:0001690!7.70e-10!2;UBERON:0001844!7.70e-10!2;UBERON:0001849!7.70e-10!2;UBERON:0002499!7.70e-10!2;UBERON:0005944!7.70e-10!2;UBERON:0001855!7.70e-10!2;UBERON:0001703!7.70e-10!2;UBERON:0003069!7.70e-10!2;UBERON:0003051!7.70e-10!2;UBERON:0004288!7.70e-10!2;UBERON:0004637!7.70e-10!2;UBERON:0004761!7.70e-10!2;UBERON:0010113!7.70e-10!2;UBERON:0003089!7.70e-10!2;UBERON:0009123!7.70e-10!2;UBERON:0009617!7.70e-10!2;UBERON:0005641!7.70e-10!2;UBERON:0000064!2.72e-09!99;UBERON:0002405!3.01e-09!70;UBERON:0000949!6.38e-09!72;UBERON:0001041!1.04e-08!92;UBERON:0000077!4.11e-08!97;UBERON:0003104!3.10e-07!131;UBERON:0009142!3.10e-07!131;UBERON:0003081!7.65e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.41e-27,23;UBERON:0000974,2.41e-27,23;UBERON:0004807,2.41e-27,23;UBERON:0005058,2.41e-27,23;UBERON:0003351,2.41e-27,23;UBERON:0009113,2.41e-27,23;UBERON:0003295,2.41e-27,23;UBERON:0009722,2.41e-27,23;UBERON:0005562,2.41e-27,23;UBERON:0007690,2.41e-27,23;UBERON:0006562,3.46e-26,24;UBERON:0003408,3.46e-26,24;UBERON:0001557,3.46e-26,24;UBERON:0001042,3.46e-26,24;UBERON:0008814,3.46e-26,24;UBERON:0009145,3.46e-26,24;UBERON:0007811,3.57e-26,36;UBERON:0000072,3.15e-23,27;UBERON:0000153,8.03e-22,43;UBERON:0004177,1.36e-21,29;UBERON:0005057,1.36e-21,29;UBERON:0000077,8.36e-18,35;UBERON:0004766,1.87e-17,2;UBERON:0008193,1.87e-17,2;UBERON:0005913,1.87e-17,2;UBERON:0011158,1.87e-17,2;UBERON:0005744,1.87e-17,2;UBERON:0003457,1.87e-17,2;UBERON:0008001,1.87e-17,2;UBERON:0007497,1.87e-17,2;UBERON:0009955,1.87e-17,2;UBERON:0003067,1.87e-17,2;UBERON:0002546,1.87e-17,2;UBERON:0007914,1.87e-17,2;UBERON:0005253,1.87e-17,2;UBERON:0002227,1.87e-17,2;UBERON:0001846,1.87e-17,2;UBERON:0004339,1.87e-17,2;UBERON:0002105,1.87e-17,2;UBERON:0001678,1.87e-17,2;UBERON:0003128,1.87e-17,2;UBERON:0001694,1.87e-17,2;UBERON:0004681,1.87e-17,2;UBERON:0001839,1.87e-17,2;UBERON:0001690,1.87e-17,2;UBERON:0001844,1.87e-17,2;UBERON:0001849,1.87e-17,2;UBERON:0002499,1.87e-17,2;UBERON:0001855,1.87e-17,2;UBERON:0011137,1.87e-17,2;UBERON:0001703,1.87e-17,2;UBERON:0010323,1.87e-17,2;UBERON:0003129,1.87e-17,2;UBERON:0003069,1.87e-17,2;UBERON:0003051,1.87e-17,2;UBERON:0004637,1.87e-17,2;UBERON:0004761,1.87e-17,2;UBERON:0010113,1.87e-17,2;UBERON:0009123,1.87e-17,2;UBERON:0010351,1.87e-17,2;UBERON:0009617,1.87e-17,2;UBERON:0005641,1.87e-17,2;UBERON:0010349,1.87e-17,2;UBERON:0000065,4.06e-15,41;UBERON:0001004,9.60e-15,42;UBERON:0000490,5.41e-14,66;UBERON:0002390,1.01e-13,45;UBERON:0003061,1.01e-13,45;UBERON:0002193,7.94e-13,48;UBERON:0002405,7.94e-13,48;UBERON:0003929,4.10e-11,55;UBERON:0002368,3.93e-10,60;UBERON:0002530,2.67e-09,65;UBERON:0005911,1.01e-08,69;UBERON:0000949,2.51e-08,72;UBERON:0001041,2.03e-07,80;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120;UBERON:0003081,9.25e-07,87|phase1_expression=7.04654927261093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,2.02725215290164,5.03283690107653,4.54722880422283,3.40150721768215,0.993406773906324,1.56254084375959,0.590758108698309,2.1202954489111,0.609654453239999,1.81487133246313,1.26695244961678,1.34696578296461,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Sh2d4b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328381 | |||
|HGNC= | |||
|MCL_coexpression_id=51 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A6X942 | |||
|association_with_transcript=-42bp_to_ENSMUST00000096000_5end | |||
|cluster_id=chr14:41706597..41706608,- | |||
|description=CAGE_peak_1_at_Sh2d4b_5end | |||
|id=chr14:41706597..41706608,- | |||
|ontology_enrichment_celltype=CL:0000197!7.70e-10!2;CL:0002491!7.70e-10!2;CL:0000098!7.70e-10!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.87e-17,2;CL:0002491,1.87e-17,2;CL:0000098,1.87e-17,2;CL:0002374,9.82e-10,1;CL:0000202,9.82e-10,1;CL:0000199,9.82e-10,1;CL:0000855,9.82e-10,1;CL:0000589,9.82e-10,1;CL:0000710,2.09e-09,1;CL:0002077,2.09e-09,1;CL:0005014,2.09e-09,1;CL:0002315,2.09e-09,1;CL:0002490,2.09e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.57e-33!23;UBERON:0000974!3.57e-33!23;UBERON:0004807!3.57e-33!23;UBERON:0005058!3.57e-33!23;UBERON:0003351!3.57e-33!23;UBERON:0009113!3.57e-33!23;UBERON:0003295!3.57e-33!23;UBERON:0009722!3.57e-33!23;UBERON:0005562!3.57e-33!23;UBERON:0007690!3.57e-33!23;UBERON:0006562!1.08e-31!24;UBERON:0003408!1.08e-31!24;UBERON:0001557!1.08e-31!24;UBERON:0001042!1.08e-31!24;UBERON:0008814!1.08e-31!24;UBERON:0009145!1.08e-31!24;UBERON:0000072!6.59e-28!27;UBERON:0004177!8.11e-26!29;UBERON:0000065!4.86e-23!41;UBERON:0001004!2.00e-22!42;UBERON:0000063!5.61e-21!35;UBERON:0002390!9.02e-16!45;UBERON:0003061!9.02e-16!45;UBERON:0002193!1.25e-14!48;UBERON:0005057!1.26e-13!51;UBERON:0000490!1.40e-13!66;UBERON:0005911!1.46e-12!69;UBERON:0003929!1.88e-12!55;UBERON:0002368!3.31e-11!60;UBERON:0007811!3.74e-11!86;UBERON:0002530!3.75e-10!65;UBERON:0000153!6.02e-10!94;UBERON:0003465!7.70e-10!2;UBERON:0008193!7.70e-10!2;UBERON:0000032!7.70e-10!2;UBERON:0005744!7.70e-10!2;UBERON:0008001!7.70e-10!2;UBERON:0007497!7.70e-10!2;UBERON:0009955!7.70e-10!2;UBERON:0003067!7.70e-10!2;UBERON:0002546!7.70e-10!2;UBERON:0007914!7.70e-10!2;UBERON:0003457!7.70e-10!2;UBERON:0004766!7.70e-10!2;UBERON:0005253!7.70e-10!2;UBERON:0002227!7.70e-10!2;UBERON:0001846!7.70e-10!2;UBERON:0003128!7.70e-10!2;UBERON:0002241!7.70e-10!2;UBERON:0002105!7.70e-10!2;UBERON:0001678!7.70e-10!2;UBERON:0003129!7.70e-10!2;UBERON:0001694!7.70e-10!2;UBERON:0004681!7.70e-10!2;UBERON:0001839!7.70e-10!2;UBERON:0001690!7.70e-10!2;UBERON:0001844!7.70e-10!2;UBERON:0001849!7.70e-10!2;UBERON:0002499!7.70e-10!2;UBERON:0005944!7.70e-10!2;UBERON:0001855!7.70e-10!2;UBERON:0001703!7.70e-10!2;UBERON:0003069!7.70e-10!2;UBERON:0003051!7.70e-10!2;UBERON:0004288!7.70e-10!2;UBERON:0004637!7.70e-10!2;UBERON:0004761!7.70e-10!2;UBERON:0010113!7.70e-10!2;UBERON:0003089!7.70e-10!2;UBERON:0009123!7.70e-10!2;UBERON:0009617!7.70e-10!2;UBERON:0005641!7.70e-10!2;UBERON:0000064!2.72e-09!99;UBERON:0002405!3.01e-09!70;UBERON:0000949!6.38e-09!72;UBERON:0001041!1.04e-08!92;UBERON:0000077!4.11e-08!97;UBERON:0003104!3.10e-07!131;UBERON:0009142!3.10e-07!131;UBERON:0003081!7.65e-07!88 | |||
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|short_description=p1@Sh2d4b | |||
}} |
Revision as of 07:35, 4 August 2015
Short description: | p1@Sh2d4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh2d4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | -42bp_to_ENSMUST00000096000_5end |
EntrezGene: | 328381 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.87e-17 | 2 |
auditory epithelial cell | 1.87e-17 | 2 |
sensory epithelial cell | 1.87e-17 | 2 |
ear hair cell | 9.82e-10 | 1 |
auditory hair cell | 9.82e-10 | 1 |
mechanoreceptor cell | 9.82e-10 | 1 |
sensory hair cell | 9.82e-10 | 1 |
cochlear inner hair cell | 9.82e-10 | 1 |
neurecto-epithelial cell | 2.09e-09 | 1 |
ecto-epithelial cell | 2.09e-09 | 1 |
auditory epithelial support cell | 2.09e-09 | 1 |
supporting cell of cochlea | 2.09e-09 | 1 |
organ of Corti supporting cell | 2.09e-09 | 1 |