FFCP PHASE1:Mm9::chr14:46703699..46703701,+: Difference between revisions
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{{FFCP|EntrezGene=218963|HGNC=|MCL_coexpression_id=226|UniProt=Q922B0|association_with_transcript=0bp_to_NR_002875,uc007thb.2_5end|description=CAGE_peak_1_at_Gm1821_5end|id=chr14:46703699..46703701,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,6.36e-08,3;CL:0000359,6.36e-08,3;CL:0002539,6.36e-08,3;CL:0000514,6.36e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.36e-08,3;UBERON:0004237,6.36e-08,3;UBERON:0004695,6.36e-08,3;UBERON:0002111,6.36e-08,3;UBERON:0004178,6.36e-08,3;UBERON:0001153,5.73e-07,1;UBERON:0001045,5.73e-07,1|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.387369970324729,0.422366166455,2.57470978954193,0.34243593645101,0.159544317990673,0.342401459862411,0.611942816932982,0.333109761815663,0.202475267389826,0.699561878128147,0.473193248037357,0.137114433605739,0.84877930359606,0.425216450755349,0.496454756004426,0.261199789138935,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,1.76469446409304,0,0.971020706062307,1.1330713617802,1.21652317463417,0,2.34717403304412,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,0,0,0.725362142011344,0.336093799142464,0.514518872071894,0.286533439938757,0,0.809265843438391,0,0,0,0,0,1.97773272513395,0,0.898800331555214,0,0,1.08004750665353,0.841299845405528,0.285650984403804,0.441737081903227,0.61245399607477,0.670918297127655,0,1.10115880999389,0.510749352340751,0.153606533256243,0.527545150920775,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.559198337475902,0.227178579999552,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0,0.662524555381181,0.969750506270444,27.9587641827183,0.292780797011547,0.83778682725382,0.255457055208591,0.239630249011841,0,0.254140454146129,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,0,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.863088412352432,0.324270453550071,0,0,0.744281895337007,0,0,0.179397413521912,0.964887042726734,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0.144649058581512,0,1.63171705145613,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.214337035031592,0,0,0,0.304464949114599,0.704015124191131,0,0.882113592219848,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.753473828018764,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0,0.209088296014469,0.436725127492355,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0.724752362478018,0.576060012515731,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.228620419965,0.201652370273681,0.292373642219257,0.0962118416403295,0,0,0,0.358855426437903,0.167884616364078,0.19318959403219,1.12609485270709,0,0,0,0,0,0,1.20297227640581,0.685082519770642,0,0,0.45032120322422,0.906284817968409,1.55328093525546,0.518936737920883,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0,0,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p1@Gm1821}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:218963 | |||
|HGNC= | |||
|MCL_coexpression_id=226 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q922B0 | |||
|association_with_transcript=0bp_to_NR_002875,uc007thb.2_5end | |||
|cluster_id=chr14:46703699..46703701,+ | |||
|description=CAGE_peak_1_at_Gm1821_5end | |||
|id=chr14:46703699..46703701,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.36e-08,3;CL:0000359,6.36e-08,3;CL:0002539,6.36e-08,3;CL:0000514,6.36e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.36e-08,3;UBERON:0004237,6.36e-08,3;UBERON:0004695,6.36e-08,3;UBERON:0002111,6.36e-08,3;UBERON:0004178,6.36e-08,3;UBERON:0001153,5.73e-07,1;UBERON:0001045,5.73e-07,1 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0.387369970324729,0.422366166455,2.57470978954193,0.34243593645101,0.159544317990673,0.342401459862411,0.611942816932982,0.333109761815663,0.202475267389826,0.699561878128147,0.473193248037357,0.137114433605739,0.84877930359606,0.425216450755349,0.496454756004426,0.261199789138935,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,1.76469446409304,0,0.971020706062307,1.1330713617802,1.21652317463417,0,2.34717403304412,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,0,0,0.725362142011344,0.336093799142464,0.514518872071894,0.286533439938757,0,0.809265843438391,0,0,0,0,0,1.97773272513395,0,0.898800331555214,0,0,1.08004750665353,0.841299845405528,0.285650984403804,0.441737081903227,0.61245399607477,0.670918297127655,0,1.10115880999389,0.510749352340751,0.153606533256243,0.527545150920775,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,0.15279824777681,0.589257170947335,0.284743361598206,0.559198337475902,0.227178579999552,0,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.29688427812965,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0,0.662524555381181,0.969750506270444,27.9587641827183,0.292780797011547,0.83778682725382,0.255457055208591,0.239630249011841,0,0.254140454146129,0.599162557619291,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0,0.248813941220186,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,0,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,1.00534083520108,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.863088412352432,0.324270453550071,0,0,0.744281895337007,0,0,0.179397413521912,0.964887042726734,0,0.37898282354097,0.814824882210129,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0.144649058581512,0,1.63171705145613,0.491764273019036,0.275936746304732,0.321101179975584,0.35163505977661,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,0.720244376125241,0.646793418913773,0.214337035031592,0,0,0,0.304464949114599,0.704015124191131,0,0.882113592219848,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.753473828018764,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0,0.209088296014469,0.436725127492355,0.404593039154462,0.0826534557253359,0.26175594198403,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0.724752362478018,0.576060012515731,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.228620419965,0.201652370273681,0.292373642219257,0.0962118416403295,0,0,0,0.358855426437903,0.167884616364078,0.19318959403219,1.12609485270709,0,0,0,0,0,0,1.20297227640581,0.685082519770642,0,0,0.45032120322422,0.906284817968409,1.55328093525546,0.518936737920883,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0,0,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Gm1821 | |||
}} |
Revision as of 08:14, 4 August 2015
Short description: | p1@Gm1821 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm1821_5end |
Coexpression cluster: | MCL_coexpression_mm9:226 |
Association with transcript: | 0bp_to_NR_002875, uc007thb.2_5end |
EntrezGene: | 218963 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.36e-08 | 3 |
vascular associated smooth muscle cell | 6.36e-08 | 3 |
aortic smooth muscle cell | 6.36e-08 | 3 |
smooth muscle myoblast | 6.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 6.36e-08 | 3 |
blood vessel smooth muscle | 6.36e-08 | 3 |
arterial system smooth muscle | 6.36e-08 | 3 |
artery smooth muscle tissue | 6.36e-08 | 3 |
aorta smooth muscle tissue | 6.36e-08 | 3 |
caecum | 5.73e-07 | 1 |
midgut | 5.73e-07 | 1 |