FFCP PHASE1:Mm9::chr8:96676892..96676904,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:96676892..96676904,+|id=chr8:96676892..96676904,+|ontology_enrichment_celltype=CL:0002453!3.94e-17!8;CL:0000333!6.59e-17!10;CL:0000095!6.59e-17!10;CL:0000243!6.59e-17!10;CL:0000123!6.59e-17!10;CL:0000125!6.59e-17!10;CL:0000030!6.59e-17!10;CL:0000339!6.59e-17!10;CL:0000128!4.44e-12!6;CL:0000126!4.44e-12!6;CL:0000127!4.44e-12!6;CL:0002604!7.10e-07!2;CL:0002605!7.10e-07!2;CL:0000864!9.12e-07!2;CL:0000878!9.12e-07!2;CL:0000129!9.12e-07!2|ontology_enrichment_celltype_v019_2=CL:0002453,5.02e-54,8;CL:0000333,3.14e-43,10;CL:0000095,3.14e-43,10;CL:0000243,3.14e-43,10;CL:0000123,3.14e-43,10;CL:0000125,3.14e-43,10;CL:0000030,3.14e-43,10;CL:0000339,3.14e-43,10;CL:0000128,3.50e-37,6;CL:0000126,3.50e-37,6;CL:0000127,3.50e-37,6;CL:0002605,4.66e-19,2;CL:0002604,4.66e-19,2;CL:0000878,1.06e-18,2;CL:0000129,1.06e-18,2;CL:0002319,6.53e-10,43;CL:0002194,7.66e-10,4;CL:0000766,7.66e-10,4;CL:0000234,7.66e-10,4;CL:0000576,7.66e-10,4;CL:0000235,7.66e-10,4;CL:0000864,7.66e-10,4;CL:0002009,7.66e-10,4;CL:0000040,7.66e-10,4;CL:0000559,7.66e-10,4;CL:0000221,1.12e-09,44;CL:0000133,1.12e-09,44;CL:0000219,8.02e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.15e-18!75;UBERON:0001016!2.15e-18!75;UBERON:0001017!1.63e-17!73;UBERON:0005743!1.63e-17!73;UBERON:0001049!8.15e-16!52;UBERON:0005068!8.15e-16!52;UBERON:0006241!8.15e-16!52;UBERON:0007135!8.15e-16!52;UBERON:0000955!1.07e-14!50;UBERON:0006238!1.07e-14!50;UBERON:0002616!2.52e-13!49;UBERON:0004121!4.31e-13!102;UBERON:0000924!4.31e-13!102;UBERON:0006601!4.31e-13!102;UBERON:0002791!1.32e-12!29;UBERON:0003528!1.32e-12!29;UBERON:0001893!1.32e-12!29;UBERON:0002020!3.56e-12!34;UBERON:0000033!4.93e-12!63;UBERON:0002346!1.57e-11!71;UBERON:0003075!1.57e-11!71;UBERON:0007284!1.57e-11!71;UBERON:0002619!2.51e-11!17;UBERON:0000956!7.37e-11!21;UBERON:0001869!7.37e-11!21;UBERON:0000203!7.37e-11!21;UBERON:0002298!3.29e-10!6;UBERON:0003080!7.82e-10!40;UBERON:0002780!1.20e-08!39;UBERON:0001890!1.20e-08!39;UBERON:0006240!1.20e-08!39;UBERON:0003056!1.25e-08!49;UBERON:0007811!1.30e-07!86;UBERON:0003076!1.98e-07!12;UBERON:0003057!1.98e-07!12;UBERON:0004733!3.52e-07!6;UBERON:0004732!3.52e-07!6;UBERON:0002028!3.52e-07!6;UBERON:0007277!3.52e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002037,1.04e-09,4;UBERON:0002680,1.04e-09,4;UBERON:0001895,1.04e-09,4;UBERON:0010092,1.04e-09,4;UBERON:0006215,1.04e-09,4;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003076,4.06e-07,12;UBERON:0003057,4.06e-07,12;UBERON:0004733,9.13e-07,6;UBERON:0004732,9.13e-07,6;UBERON:0002028,9.13e-07,6;UBERON:0007277,9.13e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,2.85592037554813,12.2490836416799,1.81982348112971,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,3.84218305321555,0,0,0,0.856952953211411,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0.56276261003168,0.61119299110724,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.599162557619291,0.457500602818626,0,0.347648640384553,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:96676892..96676904,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:96676892..96676904,+ | |||
|description=CAGE_peak_at_chr8:96676892..96676904,+ | |||
|id=chr8:96676892..96676904,+ | |||
|ontology_enrichment_celltype=CL:0002453!3.94e-17!8;CL:0000333!6.59e-17!10;CL:0000095!6.59e-17!10;CL:0000243!6.59e-17!10;CL:0000123!6.59e-17!10;CL:0000125!6.59e-17!10;CL:0000030!6.59e-17!10;CL:0000339!6.59e-17!10;CL:0000128!4.44e-12!6;CL:0000126!4.44e-12!6;CL:0000127!4.44e-12!6;CL:0002604!7.10e-07!2;CL:0002605!7.10e-07!2;CL:0000864!9.12e-07!2;CL:0000878!9.12e-07!2;CL:0000129!9.12e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,5.02e-54,8;CL:0000333,3.14e-43,10;CL:0000095,3.14e-43,10;CL:0000243,3.14e-43,10;CL:0000123,3.14e-43,10;CL:0000125,3.14e-43,10;CL:0000030,3.14e-43,10;CL:0000339,3.14e-43,10;CL:0000128,3.50e-37,6;CL:0000126,3.50e-37,6;CL:0000127,3.50e-37,6;CL:0002605,4.66e-19,2;CL:0002604,4.66e-19,2;CL:0000878,1.06e-18,2;CL:0000129,1.06e-18,2;CL:0002319,6.53e-10,43;CL:0002194,7.66e-10,4;CL:0000766,7.66e-10,4;CL:0000234,7.66e-10,4;CL:0000576,7.66e-10,4;CL:0000235,7.66e-10,4;CL:0000864,7.66e-10,4;CL:0002009,7.66e-10,4;CL:0000040,7.66e-10,4;CL:0000559,7.66e-10,4;CL:0000221,1.12e-09,44;CL:0000133,1.12e-09,44;CL:0000219,8.02e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-18!75;UBERON:0001016!2.15e-18!75;UBERON:0001017!1.63e-17!73;UBERON:0005743!1.63e-17!73;UBERON:0001049!8.15e-16!52;UBERON:0005068!8.15e-16!52;UBERON:0006241!8.15e-16!52;UBERON:0007135!8.15e-16!52;UBERON:0000955!1.07e-14!50;UBERON:0006238!1.07e-14!50;UBERON:0002616!2.52e-13!49;UBERON:0004121!4.31e-13!102;UBERON:0000924!4.31e-13!102;UBERON:0006601!4.31e-13!102;UBERON:0002791!1.32e-12!29;UBERON:0003528!1.32e-12!29;UBERON:0001893!1.32e-12!29;UBERON:0002020!3.56e-12!34;UBERON:0000033!4.93e-12!63;UBERON:0002346!1.57e-11!71;UBERON:0003075!1.57e-11!71;UBERON:0007284!1.57e-11!71;UBERON:0002619!2.51e-11!17;UBERON:0000956!7.37e-11!21;UBERON:0001869!7.37e-11!21;UBERON:0000203!7.37e-11!21;UBERON:0002298!3.29e-10!6;UBERON:0003080!7.82e-10!40;UBERON:0002780!1.20e-08!39;UBERON:0001890!1.20e-08!39;UBERON:0006240!1.20e-08!39;UBERON:0003056!1.25e-08!49;UBERON:0007811!1.30e-07!86;UBERON:0003076!1.98e-07!12;UBERON:0003057!1.98e-07!12;UBERON:0004733!3.52e-07!6;UBERON:0004732!3.52e-07!6;UBERON:0002028!3.52e-07!6;UBERON:0007277!3.52e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002037,1.04e-09,4;UBERON:0002680,1.04e-09,4;UBERON:0001895,1.04e-09,4;UBERON:0010092,1.04e-09,4;UBERON:0006215,1.04e-09,4;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003076,4.06e-07,12;UBERON:0003057,4.06e-07,12;UBERON:0004733,9.13e-07,6;UBERON:0004732,9.13e-07,6;UBERON:0002028,9.13e-07,6;UBERON:0007277,9.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92445281484804,2.85592037554813,12.2490836416799,1.81982348112971,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,3.84218305321555,0,0,0,0.856952953211411,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0.56276261003168,0.61119299110724,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25668024088073,0,0,0,0,0.599162557619291,0.457500602818626,0,0.347648640384553,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.258319646955462,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:96676892..96676904,+ | |||
}} |
Latest revision as of 08:56, 4 August 2015
Short description: | p@chr8:96676892..96676904, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:96676892..96676904, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 5.02e-54 | 8 |
migratory neural crest cell | 3.14e-43 | 10 |
neuron associated cell | 3.14e-43 | 10 |
glial cell (sensu Vertebrata) | 3.14e-43 | 10 |
neuron associated cell (sensu Vertebrata) | 3.14e-43 | 10 |
glial cell | 3.14e-43 | 10 |
glioblast | 3.14e-43 | 10 |
glioblast (sensu Vertebrata) | 3.14e-43 | 10 |
oligodendrocyte | 3.50e-37 | 6 |
macroglial cell | 3.50e-37 | 6 |
astrocyte | 3.50e-37 | 6 |
astrocyte of the cerebral cortex | 4.66e-19 | 2 |
astrocyte of the hippocampus | 4.66e-19 | 2 |
central nervous system macrophage | 1.06e-18 | 2 |
microglial cell | 1.06e-18 | 2 |
neural cell | 6.53e-10 | 43 |
monopoietic cell | 7.66e-10 | 4 |
myeloid leukocyte | 7.66e-10 | 4 |
phagocyte | 7.66e-10 | 4 |
monocyte | 7.66e-10 | 4 |
macrophage | 7.66e-10 | 4 |
tissue-resident macrophage | 7.66e-10 | 4 |
macrophage dendritic cell progenitor | 7.66e-10 | 4 |
monoblast | 7.66e-10 | 4 |
promonocyte | 7.66e-10 | 4 |
ectodermal cell | 1.12e-09 | 44 |
neurectodermal cell | 1.12e-09 | 44 |
motile cell | 8.02e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
cerebellum | 1.04e-09 | 4 |
regional part of metencephalon | 1.04e-09 | 4 |
metencephalon | 1.04e-09 | 4 |
future metencephalon | 1.04e-09 | 4 |
rhombic lip | 1.04e-09 | 4 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
posterior neural tube | 4.06e-07 | 12 |
chordal neural plate | 4.06e-07 | 12 |
segmental subdivision of hindbrain | 9.13e-07 | 6 |
segmental subdivision of nervous system | 9.13e-07 | 6 |
hindbrain | 9.13e-07 | 6 |
presumptive hindbrain | 9.13e-07 | 6 |