FFCP PHASE1:Mm9::chr14:52630543..52630580,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=573|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:52630543..52630580,-|id=chr14:52630543..52630580,-|ontology_enrichment_celltype=CL:0000221!1.38e-18!44;CL:0000133!1.38e-18!44;CL:0002319!4.70e-18!43;CL:0000540!7.75e-15!33;CL:0000047!7.75e-15!33;CL:0000031!7.75e-15!33;CL:0000404!7.75e-15!33;CL:0000055!8.27e-13!50;CL:0000393!2.95e-10!39;CL:0000211!2.95e-10!39;CL:0000117!8.06e-09!23;CL:0000337!8.06e-09!23;CL:0000107!5.99e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,4.81e-24,44;CL:0000133,4.81e-24,44;CL:0002319,3.75e-23,43;CL:0000540,3.34e-19,33;CL:0000047,3.34e-19,33;CL:0000031,3.34e-19,33;CL:0000404,3.34e-19,33;CL:0000393,4.98e-15,39;CL:0000211,4.98e-15,39;CL:0002321,2.15e-11,70;CL:0000107,3.40e-11,9;CL:0000117,1.99e-09,23;CL:0000337,1.99e-09,23;CL:0002609,2.96e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.28e-24!102;UBERON:0000924!1.28e-24!102;UBERON:0006601!1.28e-24!102;UBERON:0000073!4.34e-24!75;UBERON:0001016!4.34e-24!75;UBERON:0001017!1.39e-23!73;UBERON:0005743!1.39e-23!73;UBERON:0002346!8.60e-20!71;UBERON:0003075!8.60e-20!71;UBERON:0007284!8.60e-20!71;UBERON:0000033!2.48e-16!63;UBERON:0003056!1.07e-15!49;UBERON:0001049!3.53e-13!52;UBERON:0005068!3.53e-13!52;UBERON:0006241!3.53e-13!52;UBERON:0007135!3.53e-13!52;UBERON:0000955!7.65e-11!50;UBERON:0006238!7.65e-11!50;UBERON:0002616!1.58e-10!49;UBERON:0003080!6.58e-10!40;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0007811!2.65e-09!86;UBERON:0000153!7.42e-09!94;UBERON:0000970!7.46e-08!9;UBERON:0000019!7.46e-08!9;UBERON:0000047!7.46e-08!9;UBERON:0004088!7.46e-08!9;UBERON:0002104!7.46e-08!9;UBERON:0001456!7.46e-08!9;UBERON:0003072!7.46e-08!9;UBERON:0003071!7.46e-08!9;UBERON:0004128!7.46e-08!9;UBERON:0000020!1.22e-07!12;UBERON:0001032!1.22e-07!12;UBERON:0004456!1.22e-07!12;UBERON:0002020!2.75e-07!34;UBERON:0000010!4.29e-07!11;UBERON:0002410!5.99e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.12e-31,95;UBERON:0000924,1.12e-31,95;UBERON:0006601,1.12e-31,95;UBERON:0001017,1.16e-26,73;UBERON:0001016,1.41e-25,75;UBERON:0002346,3.68e-25,64;UBERON:0003075,3.68e-25,64;UBERON:0007284,3.68e-25,64;UBERON:0010371,3.64e-23,73;UBERON:0003056,4.35e-18,49;UBERON:0010314,1.37e-16,92;UBERON:0000020,4.16e-13,12;UBERON:0001032,4.16e-13,12;UBERON:0004456,4.16e-13,12;UBERON:0001049,6.81e-13,52;UBERON:0005068,6.81e-13,52;UBERON:0006241,6.81e-13,52;UBERON:0007135,6.81e-13,52;UBERON:0000970,8.34e-13,9;UBERON:0000019,8.34e-13,9;UBERON:0000047,8.34e-13,9;UBERON:0010312,8.34e-13,9;UBERON:0004088,8.34e-13,9;UBERON:0002104,8.34e-13,9;UBERON:0001456,8.34e-13,9;UBERON:0003072,8.34e-13,9;UBERON:0004128,8.34e-13,9;UBERON:0003071,8.34e-13,9;UBERON:0000033,7.63e-12,13;UBERON:0005085,7.63e-12,13;UBERON:0002410,3.40e-11,9;UBERON:0000073,3.84e-11,54;UBERON:0002616,3.85e-11,46;UBERON:0000955,9.48e-11,47;UBERON:0006238,9.48e-11,47;UBERON:0001444,5.25e-10,11;UBERON:0002780,7.80e-10,39;UBERON:0001890,7.80e-10,39;UBERON:0006240,7.80e-10,39;UBERON:0003080,1.95e-09,40;UBERON:0000007,2.49e-09,8;UBERON:0003296,2.49e-09,8;UBERON:0010133,2.49e-09,8;UBERON:0000010,9.73e-09,11;UBERON:0001894,4.14e-07,10;UBERON:0006222,4.14e-07,10|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,6.87688273053643,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,3.59520132622086,8.4528027170742,2.07379224616955,2.43010688997043,2.3135745748652,1.42825492201902,2.65042249141936,4.28717797252339,3.45043695665651,3.67687514644008,0,0.510749352340751,0.307213066512487,5.40733779693795,4.11694396210843,9.89735404057844,0.279182999001381,0,0.916789486660861,0.883885756421003,1.56608848879013,0.931997229126503,0.454357159999104,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,0.599162557619291,0,1.38219787324151,0.173824320192276,0,0.41557608911912,0.648965052271031,0.712875546952214,0,0,1.47309299120532,11.5807194236806,7.58676944630461,8.28285797104606,7.83665052745718,8.43652589476465,7.17436833595159,8.99536555773397,7.76110112217047,1.29340795759705,1.32374256117473,0,0.657587197282725,0.278047249225598,0,0,1.59227413454795,0,0,0,0.621377317606506,1.40715635988658,0.900310307305074,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,2.57261530948211,0,0,1.91959425481711,0.464473343720877,0.257734922644187,0.605050573870028,0.444756087689741,0,0,0,0,0,0.38992817423824,0,0,0,2.65535061334314,2.62771579002376,3.38123207019241,1.4255592949172,2.32742984601151,2.73529697572242,0.569128834118316,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,1.17211686592203,0,0,4.73262329124385,6.63745865304285,5.60100834105277,5.4962823529087,5.34716817797746,3.39691836946599,3.64329631507405,2.92255857911312,1.97643888973262,0.963963949265421,0,0.534196811001766,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,1.36175842301515,7.0223826672211,8.27895576209629,5.35842587578981,3.72414490648775,2.14042581122485,1.48094118541909,3.04464949114599,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0.448549638131936,2.48187735685646,0.972255941720238,0.645799117388655,1.01373675294467,0.58678619322877,0.2604087696879,0.524296722128554,0.241584120826006,1.15212002503146,0,0.810900861160657,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0,0.887943813496259,1.16628013592318,0.503653849092235,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,0.900642406448441,0.906284817968409,1.03552062350364,6.01966615988225,3.19219898720825,1.19513524027894,0.243106717068294,0.838452650511929,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0,0.50695859978048,0.943131706930381,0.37456602987953,0.640251524048693,0.287177344778066,0.476293691283074,0.579421629724277,0.38581844092741,0,0.294397840268795,2.05721551431249,0.532427418478012,0.476872379894642,0.581385666529314,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.474540072496697,0.886540341380071,0.818462086339379,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0,0,0.231867835620421|short_description=p@chr14:52630543..52630580,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=573 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:52630543..52630580,- | |||
|description=CAGE_peak_at_chr14:52630543..52630580,- | |||
|id=chr14:52630543..52630580,- | |||
|ontology_enrichment_celltype=CL:0000221!1.38e-18!44;CL:0000133!1.38e-18!44;CL:0002319!4.70e-18!43;CL:0000540!7.75e-15!33;CL:0000047!7.75e-15!33;CL:0000031!7.75e-15!33;CL:0000404!7.75e-15!33;CL:0000055!8.27e-13!50;CL:0000393!2.95e-10!39;CL:0000211!2.95e-10!39;CL:0000117!8.06e-09!23;CL:0000337!8.06e-09!23;CL:0000107!5.99e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.81e-24,44;CL:0000133,4.81e-24,44;CL:0002319,3.75e-23,43;CL:0000540,3.34e-19,33;CL:0000047,3.34e-19,33;CL:0000031,3.34e-19,33;CL:0000404,3.34e-19,33;CL:0000393,4.98e-15,39;CL:0000211,4.98e-15,39;CL:0002321,2.15e-11,70;CL:0000107,3.40e-11,9;CL:0000117,1.99e-09,23;CL:0000337,1.99e-09,23;CL:0002609,2.96e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.28e-24!102;UBERON:0000924!1.28e-24!102;UBERON:0006601!1.28e-24!102;UBERON:0000073!4.34e-24!75;UBERON:0001016!4.34e-24!75;UBERON:0001017!1.39e-23!73;UBERON:0005743!1.39e-23!73;UBERON:0002346!8.60e-20!71;UBERON:0003075!8.60e-20!71;UBERON:0007284!8.60e-20!71;UBERON:0000033!2.48e-16!63;UBERON:0003056!1.07e-15!49;UBERON:0001049!3.53e-13!52;UBERON:0005068!3.53e-13!52;UBERON:0006241!3.53e-13!52;UBERON:0007135!3.53e-13!52;UBERON:0000955!7.65e-11!50;UBERON:0006238!7.65e-11!50;UBERON:0002616!1.58e-10!49;UBERON:0003080!6.58e-10!40;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0007811!2.65e-09!86;UBERON:0000153!7.42e-09!94;UBERON:0000970!7.46e-08!9;UBERON:0000019!7.46e-08!9;UBERON:0000047!7.46e-08!9;UBERON:0004088!7.46e-08!9;UBERON:0002104!7.46e-08!9;UBERON:0001456!7.46e-08!9;UBERON:0003072!7.46e-08!9;UBERON:0003071!7.46e-08!9;UBERON:0004128!7.46e-08!9;UBERON:0000020!1.22e-07!12;UBERON:0001032!1.22e-07!12;UBERON:0004456!1.22e-07!12;UBERON:0002020!2.75e-07!34;UBERON:0000010!4.29e-07!11;UBERON:0002410!5.99e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.12e-31,95;UBERON:0000924,1.12e-31,95;UBERON:0006601,1.12e-31,95;UBERON:0001017,1.16e-26,73;UBERON:0001016,1.41e-25,75;UBERON:0002346,3.68e-25,64;UBERON:0003075,3.68e-25,64;UBERON:0007284,3.68e-25,64;UBERON:0010371,3.64e-23,73;UBERON:0003056,4.35e-18,49;UBERON:0010314,1.37e-16,92;UBERON:0000020,4.16e-13,12;UBERON:0001032,4.16e-13,12;UBERON:0004456,4.16e-13,12;UBERON:0001049,6.81e-13,52;UBERON:0005068,6.81e-13,52;UBERON:0006241,6.81e-13,52;UBERON:0007135,6.81e-13,52;UBERON:0000970,8.34e-13,9;UBERON:0000019,8.34e-13,9;UBERON:0000047,8.34e-13,9;UBERON:0010312,8.34e-13,9;UBERON:0004088,8.34e-13,9;UBERON:0002104,8.34e-13,9;UBERON:0001456,8.34e-13,9;UBERON:0003072,8.34e-13,9;UBERON:0004128,8.34e-13,9;UBERON:0003071,8.34e-13,9;UBERON:0000033,7.63e-12,13;UBERON:0005085,7.63e-12,13;UBERON:0002410,3.40e-11,9;UBERON:0000073,3.84e-11,54;UBERON:0002616,3.85e-11,46;UBERON:0000955,9.48e-11,47;UBERON:0006238,9.48e-11,47;UBERON:0001444,5.25e-10,11;UBERON:0002780,7.80e-10,39;UBERON:0001890,7.80e-10,39;UBERON:0006240,7.80e-10,39;UBERON:0003080,1.95e-09,40;UBERON:0000007,2.49e-09,8;UBERON:0003296,2.49e-09,8;UBERON:0010133,2.49e-09,8;UBERON:0000010,9.73e-09,11;UBERON:0001894,4.14e-07,10;UBERON:0006222,4.14e-07,10 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,1.74986909166855,1.39986421625363,1.43752564364972,0,0,0,0,0,0,5.26022798234954,6.87688273053643,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,3.59520132622086,8.4528027170742,2.07379224616955,2.43010688997043,2.3135745748652,1.42825492201902,2.65042249141936,4.28717797252339,3.45043695665651,3.67687514644008,0,0.510749352340751,0.307213066512487,5.40733779693795,4.11694396210843,9.89735404057844,0.279182999001381,0,0.916789486660861,0.883885756421003,1.56608848879013,0.931997229126503,0.454357159999104,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0.230615497256059,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,0.599162557619291,0,1.38219787324151,0.173824320192276,0,0.41557608911912,0.648965052271031,0.712875546952214,0,0,1.47309299120532,11.5807194236806,7.58676944630461,8.28285797104606,7.83665052745718,8.43652589476465,7.17436833595159,8.99536555773397,7.76110112217047,1.29340795759705,1.32374256117473,0,0.657587197282725,0.278047249225598,0,0,1.59227413454795,0,0,0,0.621377317606506,1.40715635988658,0.900310307305074,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0.420579897128254,2.57261530948211,0,0,1.91959425481711,0.464473343720877,0.257734922644187,0.605050573870028,0.444756087689741,0,0,0,0,0,0.38992817423824,0,0,0,2.65535061334314,2.62771579002376,3.38123207019241,1.4255592949172,2.32742984601151,2.73529697572242,0.569128834118316,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,1.17211686592203,0,0,4.73262329124385,6.63745865304285,5.60100834105277,5.4962823529087,5.34716817797746,3.39691836946599,3.64329631507405,2.92255857911312,1.97643888973262,0.963963949265421,0,0.534196811001766,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,1.36175842301515,7.0223826672211,8.27895576209629,5.35842587578981,3.72414490648775,2.14042581122485,1.48094118541909,3.04464949114599,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0,0,0,0,0.56369293868419,0.448549638131936,2.48187735685646,0.972255941720238,0.645799117388655,1.01373675294467,0.58678619322877,0.2604087696879,0.524296722128554,0.241584120826006,1.15212002503146,0,0.810900861160657,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.192423683280659,0.116876902181569,0,0.887943813496259,1.16628013592318,0.503653849092235,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,0,0.900642406448441,0.906284817968409,1.03552062350364,6.01966615988225,3.19219898720825,1.19513524027894,0.243106717068294,0.838452650511929,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0,0.50695859978048,0.943131706930381,0.37456602987953,0.640251524048693,0.287177344778066,0.476293691283074,0.579421629724277,0.38581844092741,0,0.294397840268795,2.05721551431249,0.532427418478012,0.476872379894642,0.581385666529314,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.474540072496697,0.886540341380071,0.818462086339379,0.464810523557898,0.192906610981141,0.999242311751784,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p@chr14:52630543..52630580,- | |||
}} |
Latest revision as of 09:46, 4 August 2015
Short description: | p@chr14:52630543..52630580, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:52630543..52630580, - |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.81e-24 | 44 |
neurectodermal cell | 4.81e-24 | 44 |
neural cell | 3.75e-23 | 43 |
neuron | 3.34e-19 | 33 |
neuronal stem cell | 3.34e-19 | 33 |
neuroblast | 3.34e-19 | 33 |
electrically signaling cell | 3.34e-19 | 33 |
electrically responsive cell | 4.98e-15 | 39 |
electrically active cell | 4.98e-15 | 39 |
embryonic cell | 2.15e-11 | 70 |
autonomic neuron | 3.40e-11 | 9 |
CNS neuron (sensu Vertebrata) | 1.99e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.99e-09 | 23 |
neuron of cerebral cortex | 2.96e-07 | 6 |