FFCP PHASE1:Mm9::chr11:98187500..98187512,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:98187500..98187512,-|id=chr11:98187500..98187512,-|ontology_enrichment_celltype=CL:0002609!8.01e-20!6;CL:0002608!1.58e-10!3;CL:0000117!8.96e-10!23;CL:0000337!8.96e-10!23|ontology_enrichment_celltype_v019_2=CL:0002609,3.91e-58,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!3.87e-20!21;UBERON:0001869!3.87e-20!21;UBERON:0000203!3.87e-20!21;UBERON:0001049!6.57e-20!52;UBERON:0005068!6.57e-20!52;UBERON:0006241!6.57e-20!52;UBERON:0007135!6.57e-20!52;UBERON:0002616!2.86e-19!49;UBERON:0000955!8.38e-19!50;UBERON:0006238!8.38e-19!50;UBERON:0000033!1.08e-17!63;UBERON:0002346!8.54e-17!71;UBERON:0003075!8.54e-17!71;UBERON:0007284!8.54e-17!71;UBERON:0002791!3.20e-16!29;UBERON:0003528!3.20e-16!29;UBERON:0001893!3.20e-16!29;UBERON:0002020!1.33e-15!34;UBERON:0003056!4.43e-15!49;UBERON:0003080!9.34e-15!40;UBERON:0001017!1.50e-14!73;UBERON:0005743!1.50e-14!73;UBERON:0000073!4.79e-14!75;UBERON:0001016!4.79e-14!75;UBERON:0002780!3.14e-13!39;UBERON:0001890!3.14e-13!39;UBERON:0006240!3.14e-13!39;UBERON:0007811!8.96e-12!86;UBERON:0004121!1.56e-11!102;UBERON:0000924!1.56e-11!102;UBERON:0006601!1.56e-11!102;UBERON:0001954!2.33e-11!7;UBERON:0003022!2.33e-11!7;UBERON:0002421!2.33e-11!7;UBERON:0000349!2.33e-11!7;UBERON:0002600!2.33e-11!7;UBERON:0002619!5.44e-11!17;UBERON:0000153!2.15e-10!94;UBERON:0000025!8.71e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07379224616955,1.08004750665353,1.68259969081106,0,0,0.367472397644862,1.15014565221884,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr11:98187500..98187512,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:98187500..98187512,- | |||
|description=CAGE_peak_at_chr11:98187500..98187512,- | |||
|id=chr11:98187500..98187512,- | |||
|ontology_enrichment_celltype=CL:0002609!8.01e-20!6;CL:0002608!1.58e-10!3;CL:0000117!8.96e-10!23;CL:0000337!8.96e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.91e-58,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002608,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.87e-20!21;UBERON:0001869!3.87e-20!21;UBERON:0000203!3.87e-20!21;UBERON:0001049!6.57e-20!52;UBERON:0005068!6.57e-20!52;UBERON:0006241!6.57e-20!52;UBERON:0007135!6.57e-20!52;UBERON:0002616!2.86e-19!49;UBERON:0000955!8.38e-19!50;UBERON:0006238!8.38e-19!50;UBERON:0000033!1.08e-17!63;UBERON:0002346!8.54e-17!71;UBERON:0003075!8.54e-17!71;UBERON:0007284!8.54e-17!71;UBERON:0002791!3.20e-16!29;UBERON:0003528!3.20e-16!29;UBERON:0001893!3.20e-16!29;UBERON:0002020!1.33e-15!34;UBERON:0003056!4.43e-15!49;UBERON:0003080!9.34e-15!40;UBERON:0001017!1.50e-14!73;UBERON:0005743!1.50e-14!73;UBERON:0000073!4.79e-14!75;UBERON:0001016!4.79e-14!75;UBERON:0002780!3.14e-13!39;UBERON:0001890!3.14e-13!39;UBERON:0006240!3.14e-13!39;UBERON:0007811!8.96e-12!86;UBERON:0004121!1.56e-11!102;UBERON:0000924!1.56e-11!102;UBERON:0006601!1.56e-11!102;UBERON:0001954!2.33e-11!7;UBERON:0003022!2.33e-11!7;UBERON:0002421!2.33e-11!7;UBERON:0000349!2.33e-11!7;UBERON:0002600!2.33e-11!7;UBERON:0002619!5.44e-11!17;UBERON:0000153!2.15e-10!94;UBERON:0000025!8.71e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07379224616955,1.08004750665353,1.68259969081106,0,0,0.367472397644862,1.15014565221884,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:98187500..98187512,- | |||
}} |
Latest revision as of 12:08, 4 August 2015
Short description: | p@chr11:98187500..98187512, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:98187500..98187512, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.91e-58 | 6 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
hippocampal neuron | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |