FFCP PHASE1:Mm9::chr12:103213893..103213956,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=282|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:103213893..103213956,-|id=chr12:103213893..103213956,-|ontology_enrichment_celltype=CL:0000117!2.41e-07!23;CL:0000337!2.41e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-07,23;CL:0000337,2.41e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.64e-10!34;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0001049!1.33e-09!52;UBERON:0005068!1.33e-09!52;UBERON:0006241!1.33e-09!52;UBERON:0007135!1.33e-09!52;UBERON:0000025!3.18e-09!114;UBERON:0000955!7.65e-09!50;UBERON:0006238!7.65e-09!50;UBERON:0002616!7.77e-09!49;UBERON:0003103!7.78e-09!43;UBERON:0007100!1.04e-08!18;UBERON:0000948!1.04e-08!18;UBERON:0005498!1.04e-08!18;UBERON:0004140!1.04e-08!18;UBERON:0009881!1.04e-08!18;UBERON:0004141!1.04e-08!18;UBERON:0003084!1.04e-08!18;UBERON:0007005!1.04e-08!18;UBERON:0004139!1.04e-08!18;UBERON:0004291!1.04e-08!18;UBERON:0004111!2.13e-08!122;UBERON:0001017!1.07e-07!73;UBERON:0005743!1.07e-07!73;UBERON:0000956!2.39e-07!21;UBERON:0001869!2.39e-07!21;UBERON:0000203!2.39e-07!21;UBERON:0003080!2.66e-07!40;UBERON:0000073!3.50e-07!75;UBERON:0001016!3.50e-07!75;UBERON:0002780!3.81e-07!39;UBERON:0001890!3.81e-07!39;UBERON:0006240!3.81e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.02e-12,92;UBERON:0002020,1.64e-10,34;UBERON:0000073,8.20e-10,54;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0001049,1.33e-09,52;UBERON:0005068,1.33e-09,52;UBERON:0006241,1.33e-09,52;UBERON:0007135,1.33e-09,52;UBERON:0000025,3.18e-09,114;UBERON:0003103,7.78e-09,43;UBERON:0007100,1.04e-08,18;UBERON:0000948,1.04e-08,18;UBERON:0005498,1.04e-08,18;UBERON:0004140,1.04e-08,18;UBERON:0009881,1.04e-08,18;UBERON:0004141,1.04e-08,18;UBERON:0003084,1.04e-08,18;UBERON:0007005,1.04e-08,18;UBERON:0004139,1.04e-08,18;UBERON:0004291,1.04e-08,18;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0002616,1.57e-08,46;UBERON:0004111,2.13e-08,122;UBERON:0001017,1.07e-07,73;UBERON:0000956,2.39e-07,21;UBERON:0001869,2.39e-07,21;UBERON:0000203,2.39e-07,21;UBERON:0003080,2.66e-07,40;UBERON:0001016,3.50e-07,75;UBERON:0002780,3.81e-07,39;UBERON:0001890,3.81e-07,39;UBERON:0006240,3.81e-07,39|phase1_expression=25.9441132309766,11.1672130444596,15.0149748998547,9.67885476181856,14.5259761684441,9.9048770428015,16.5864974822823,14.332688902015,21.11830832275,11.0010327371337,21.4022460281881,12.4444568032725,19.3456824822262,14.7740480088106,30.9792078488566,40.697528745355,45.4715220783295,29.4957124609952,26.0517423850904,35.2243410992365,26.788636397587,36.1419062371222,47.2771618341473,31.8384921358879,31.1996622251351,24.6919744569459,25.8457197695445,12.4973314957816,38.0046838912748,22.9347418081537,19.7340154483221,17.7808588568697,7.99584223859941,15.8481681015439,29.7517168343813,36.4053873335098,32.054588933192,41.8531630736908,59.3814861838088,52.3523743973798,46.4702875544501,45.7640474922159,51.9496077743334,21.0247686019214,22.6070556619517,23.3104375245336,90.7573959443725,113.591106474213,64.3680515412002,84.7714359963876,59.4942291907791,100.62679505548,37.5833037569329,29.0144856804538,29.2401605253944,47.5929956666502,43.553082870691,76.8351417493389,58.874090110143,83.0515837457092,98.8776989469639,84.3722884852139,89.8187744072251,95.839319890469,109.764166244934,78.152812644071,82.3900303925613,124.870949229505,38.0540877172113,64.9378563375432,41.4340173862223,83.1244364615068,70.8988016454679,54.3859148514396,43.3221529002428,94.6795350208322,28.6301290598411,52.2241212768418,53.3014670399165,43.2587023755036,55.2585367358554,54.6959039084598,87.942644685435,84.414391504752,49.3538340319097,23.8649154233671,56.8063006388421,46.2270625646745,23.5508461266202,29.0194790810056,18.2614627882057,59.3692475117157,59.1575060325743,65.8437893798137,76.0238408413773,69.444167500087,34.9706606128062,24.8828270963964,66.2454311737315,46.6408238353649,28.7320576344428,16.6824420638613,0,0,75.7718643539249,65.6202051580505,85.9391556525132,35.8537382317848,17.0899003207133,24.6413950847609,36.9523746011869,50.5412693998154,38.5127880417618,29.9938054699719,34.4534911907615,39.2079764948587,25.7082766443749,57.5505440541248,28.307537662396,40.6034793367997,46.3767188766826,53.3362778448744,50.325775528893,36.5975996264434,31.2075593152048,36.27490183962,36.5436129743057,29.395233818677,34.3089613097275,43.5890760668034,43.9200578705881,39.832429619778,45.1943232499919,26.338692105024,52.7781633181283,49.8080677618016,26.7837526926332,37.5709051242481,49.5336606530002,42.2988130331813,26.5445703643916,15.6333431014762,19.9868964083938,26.2226383034144,23.2004462106028,35.4875005189034,32.7956035959051,37.5119887571573,19.4011193639558,13.4265316919152,20.586281527182,36.1672958505498,31.9754336609438,19.5021213252413,27.9863705514803,30.253208556411,34.4084461783485,24.70539908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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=282 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:103213893..103213956,- | |||
|description=CAGE_peak_at_chr12:103213893..103213956,- | |||
|id=chr12:103213893..103213956,- | |||
|ontology_enrichment_celltype=CL:0000117!2.41e-07!23;CL:0000337!2.41e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.41e-07,23;CL:0000337,2.41e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.64e-10!34;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0001049!1.33e-09!52;UBERON:0005068!1.33e-09!52;UBERON:0006241!1.33e-09!52;UBERON:0007135!1.33e-09!52;UBERON:0000025!3.18e-09!114;UBERON:0000955!7.65e-09!50;UBERON:0006238!7.65e-09!50;UBERON:0002616!7.77e-09!49;UBERON:0003103!7.78e-09!43;UBERON:0007100!1.04e-08!18;UBERON:0000948!1.04e-08!18;UBERON:0005498!1.04e-08!18;UBERON:0004140!1.04e-08!18;UBERON:0009881!1.04e-08!18;UBERON:0004141!1.04e-08!18;UBERON:0003084!1.04e-08!18;UBERON:0007005!1.04e-08!18;UBERON:0004139!1.04e-08!18;UBERON:0004291!1.04e-08!18;UBERON:0004111!2.13e-08!122;UBERON:0001017!1.07e-07!73;UBERON:0005743!1.07e-07!73;UBERON:0000956!2.39e-07!21;UBERON:0001869!2.39e-07!21;UBERON:0000203!2.39e-07!21;UBERON:0003080!2.66e-07!40;UBERON:0000073!3.50e-07!75;UBERON:0001016!3.50e-07!75;UBERON:0002780!3.81e-07!39;UBERON:0001890!3.81e-07!39;UBERON:0006240!3.81e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.02e-12,92;UBERON:0002020,1.64e-10,34;UBERON:0000073,8.20e-10,54;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0001049,1.33e-09,52;UBERON:0005068,1.33e-09,52;UBERON:0006241,1.33e-09,52;UBERON:0007135,1.33e-09,52;UBERON:0000025,3.18e-09,114;UBERON:0003103,7.78e-09,43;UBERON:0007100,1.04e-08,18;UBERON:0000948,1.04e-08,18;UBERON:0005498,1.04e-08,18;UBERON:0004140,1.04e-08,18;UBERON:0009881,1.04e-08,18;UBERON:0004141,1.04e-08,18;UBERON:0003084,1.04e-08,18;UBERON:0007005,1.04e-08,18;UBERON:0004139,1.04e-08,18;UBERON:0004291,1.04e-08,18;UBERON:0000955,1.56e-08,47;UBERON:0006238,1.56e-08,47;UBERON:0002616,1.57e-08,46;UBERON:0004111,2.13e-08,122;UBERON:0001017,1.07e-07,73;UBERON:0000956,2.39e-07,21;UBERON:0001869,2.39e-07,21;UBERON:0000203,2.39e-07,21;UBERON:0003080,2.66e-07,40;UBERON:0001016,3.50e-07,75;UBERON:0002780,3.81e-07,39;UBERON:0001890,3.81e-07,39;UBERON:0006240,3.81e-07,39 | |||
|phase1_expression=25.9441132309766,11.1672130444596,15.0149748998547,9.67885476181856,14.5259761684441,9.9048770428015,16.5864974822823,14.332688902015,21.11830832275,11.0010327371337,21.4022460281881,12.4444568032725,19.3456824822262,14.7740480088106,30.9792078488566,40.697528745355,45.4715220783295,29.4957124609952,26.0517423850904,35.2243410992365,26.788636397587,36.1419062371222,47.2771618341473,31.8384921358879,31.1996622251351,24.6919744569459,25.8457197695445,12.4973314957816,38.0046838912748,22.9347418081537,19.7340154483221,17.7808588568697,7.99584223859941,15.8481681015439,29.7517168343813,36.4053873335098,32.054588933192,41.8531630736908,59.3814861838088,52.3523743973798,46.4702875544501,45.7640474922159,51.9496077743334,21.0247686019214,22.6070556619517,23.3104375245336,90.7573959443725,113.591106474213,64.3680515412002,84.7714359963876,59.4942291907791,100.62679505548,37.5833037569329,29.0144856804538,29.2401605253944,47.5929956666502,43.553082870691,76.8351417493389,58.874090110143,83.0515837457092,98.8776989469639,84.3722884852139,89.8187744072251,95.839319890469,109.764166244934,78.152812644071,82.3900303925613,124.870949229505,38.0540877172113,64.9378563375432,41.4340173862223,83.1244364615068,70.8988016454679,54.3859148514396,43.3221529002428,94.6795350208322,28.6301290598411,52.2241212768418,53.3014670399165,43.2587023755036,55.2585367358554,54.6959039084598,87.942644685435,84.414391504752,49.3538340319097,23.8649154233671,56.8063006388421,46.2270625646745,23.5508461266202,29.0194790810056,18.2614627882057,59.3692475117157,59.1575060325743,65.8437893798137,76.0238408413773,69.444167500087,34.9706606128062,24.8828270963964,66.2454311737315,46.6408238353649,28.7320576344428,16.6824420638613,0,0,75.7718643539249,65.6202051580505,85.9391556525132,35.8537382317848,17.0899003207133,24.6413950847609,36.9523746011869,50.5412693998154,38.5127880417618,29.9938054699719,34.4534911907615,39.2079764948587,25.7082766443749,57.5505440541248,28.307537662396,40.6034793367997,46.3767188766826,53.3362778448744,50.325775528893,36.5975996264434,31.2075593152048,36.27490183962,36.5436129743057,29.395233818677,34.3089613097275,43.5890760668034,43.9200578705881,39.832429619778,45.1943232499919,26.338692105024,52.7781633181283,49.8080677618016,26.7837526926332,37.5709051242481,49.5336606530002,42.2988130331813,26.5445703643916,15.6333431014762,19.9868964083938,26.2226383034144,23.2004462106028,35.4875005189034,32.7956035959051,37.5119887571573,19.4011193639558,13.4265316919152,20.586281527182,36.1672958505498,31.9754336609438,19.5021213252413,27.9863705514803,30.253208556411,34.4084461783485,24.7053990830127,49.4444488948331,38.7325194641389,51.3612071358601,60.500852650901,33.6177524530999,58.8325052924737,55.6904277523436,69.7601834251223,92.286050081469,108.007941689632,95.7738326496456,106.544684187333,92.4995116918214,141.960187789998,95.0651999210249,104.949419470611,47.5255283754928,30.9742883261646,25.7726650727362,28.5606611996628,30.073643325468,22.2947204986021,15.206360436007,23.1936053316844,28.4643896121434,27.9631670385462,44.1312027236396,31.2928013975621,35.1869292320377,34.6184261351602,28.4647567193915,30.5598598942435,43.8760241245629,47.3956230345394,28.8295209448684,31.4183409676754,22.5415471346161,27.0856266034268,36.8509725618489,32.8936995285594,35.7918800123296,49.5970097211463,55.4205509280053,59.4774330103079,53.6579255027739,18.1861165230543,21.8180484575655,28.7823503852613,15.4173692255262,19.7765270996982,29.5365988066447,37.6881940060562,29.0222055927313,26.907018492432,11.5014565221884,28.2827120228063,41.188972851122,52.5364066129992,56.5101852594023,24.6046195895317,20.8771104888263,19.7071068241304,13.3631280682461,25.8012530378286,34.9688469949868,18.4256883185997,33.3261097240419,26.9284434043762,24.2758121923534,32.7767740680187,23.7587605299656,27.8567635016755,32.2920916089225,28.6405135991393,43.729472342389,87.5688150948122,41.308198933599,35.5958402733105,41.4220522168503,49.4633317419097,26.5574611510214,70.4393886900201,18.6149849455591,19.9123759591286,19.1726823982191,18.4005974423465,18.4922899488387,15.286132662597,20.2405350837447,22.503701059171,18.1832377855401,35.9879874392424,23.2781739741561,28.3124309830936,23.2928351875614,28.8697715201937,15.9294166007955,17.2374251670037,32.6509441521931,38.4754362702032,20.0805287158925,26.7468578711217,12.1461297789064,23.2661586865604,28.8762876491624,30.3395287618383,22.1379078007497,25.7838858120467,26.8947288545492,26.8291030106652,25.0955846538544,30.6501960095177,20.0394464015769,37.814189331639,35.2134904088539,23.4438010818241,17.3657063967146,24.5725202202031,23.5965385918809,31.6581605647642,27.1260236849121,28.9502039655148,26.8587774007057,14.9368218768006,29.4395644996149,40.2372905362806,32.6363382323899,30.1324827226305,20.9269815927774,45.3967981381305,32.1231435144409,33.8591696345653,23.1170664791643,19.1733489683411,17.1367967517486,63.9629314070126,18.9801596148681,13.8257237646257,27.75737259120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| |||
|short_description=p@chr12:103213893..103213956,- | |||
}} |
Latest revision as of 14:23, 4 August 2015
Short description: | p@chr12:103213893..103213956, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:103213893..103213956, - |
Coexpression cluster: | MCL_coexpression_mm9:282 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.41e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.41e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.02e-12 | 92 |
gray matter | 1.64e-10 | 34 |
regional part of nervous system | 8.20e-10 | 54 |
brain grey matter | 1.22e-09 | 29 |
regional part of telencephalon | 1.22e-09 | 29 |
telencephalon | 1.22e-09 | 29 |
neural tube | 1.33e-09 | 52 |
neural rod | 1.33e-09 | 52 |
future spinal cord | 1.33e-09 | 52 |
neural keel | 1.33e-09 | 52 |
tube | 3.18e-09 | 114 |
compound organ | 7.78e-09 | 43 |
primary circulatory organ | 1.04e-08 | 18 |
heart | 1.04e-08 | 18 |
primitive heart tube | 1.04e-08 | 18 |
primary heart field | 1.04e-08 | 18 |
anterior lateral plate mesoderm | 1.04e-08 | 18 |
heart tube | 1.04e-08 | 18 |
heart primordium | 1.04e-08 | 18 |
cardiac mesoderm | 1.04e-08 | 18 |
cardiogenic plate | 1.04e-08 | 18 |
heart rudiment | 1.04e-08 | 18 |
brain | 1.56e-08 | 47 |
future brain | 1.56e-08 | 47 |
regional part of brain | 1.57e-08 | 46 |
anatomical conduit | 2.13e-08 | 122 |
central nervous system | 1.07e-07 | 73 |
cerebral cortex | 2.39e-07 | 21 |
cerebral hemisphere | 2.39e-07 | 21 |
pallium | 2.39e-07 | 21 |
anterior neural tube | 2.66e-07 | 40 |
nervous system | 3.50e-07 | 75 |
regional part of forebrain | 3.81e-07 | 39 |
forebrain | 3.81e-07 | 39 |
future forebrain | 3.81e-07 | 39 |