FFCP PHASE1:Mm9::chr2:167579743..167579760,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:167579743..167579760,+|id=chr2:167579743..167579760,+|ontology_enrichment_celltype=CL:0000557!5.94e-15!7;CL:0000049!2.93e-14!19;CL:0000763!1.82e-09!16;CL:0002194!1.96e-09!4;CL:0000766!1.96e-09!4;CL:0000576!1.96e-09!4;CL:0000235!1.96e-09!4;CL:0002009!1.96e-09!4;CL:0000040!1.96e-09!4;CL:0000559!1.96e-09!4;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32;CL:0002320!1.79e-08!46;CL:0000134!1.79e-08!46;CL:0002092!2.17e-07!3;CL:0002540!2.17e-07!3;CL:0000034!3.99e-07!97|ontology_enrichment_celltype_v019_2=CL:0002194,2.07e-14,4;CL:0000766,2.07e-14,4;CL:0000234,2.07e-14,4;CL:0000576,2.07e-14,4;CL:0000235,2.07e-14,4;CL:0000864,2.07e-14,4;CL:0002009,2.07e-14,4;CL:0000040,2.07e-14,4;CL:0000559,2.07e-14,4;CL:0000557,3.45e-14,7;CL:0002476,3.47e-13,2;CL:0000049,2.29e-11,19;CL:0000473,1.76e-08,7;CL:0000355,5.18e-07,9|ontology_enrichment_disease=DOID:0060100!6.93e-08!3;DOID:4045!6.93e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6|ontology_enrichment_uberon=UBERON:0002204!7.53e-18!32;UBERON:0002371!2.16e-17!16;UBERON:0001474!4.74e-16!22;UBERON:0004765!4.74e-16!22;UBERON:0001434!4.74e-16!22;UBERON:0002384!1.79e-08!46;UBERON:0002390!2.41e-08!45;UBERON:0003061!2.41e-08!45;UBERON:0002193!1.37e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.03e-12,32;UBERON:0002371,1.41e-09,16;UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9;UBERON:0001474,6.03e-07,22;UBERON:0004765,6.03e-07,22;UBERON:0001434,6.03e-07,22|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,17.6469446409304,14.3439551841274,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.31796636956512,2.99951365496704,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,0.419854356970974,0.552799895217695,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:167579743..167579760,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:167579743..167579760,+ | |||
|description=CAGE_peak_at_chr2:167579743..167579760,+ | |||
|id=chr2:167579743..167579760,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.94e-15!7;CL:0000049!2.93e-14!19;CL:0000763!1.82e-09!16;CL:0002194!1.96e-09!4;CL:0000766!1.96e-09!4;CL:0000576!1.96e-09!4;CL:0000235!1.96e-09!4;CL:0002009!1.96e-09!4;CL:0000040!1.96e-09!4;CL:0000559!1.96e-09!4;CL:0000988!1.09e-08!32;CL:0002032!1.09e-08!32;CL:0000037!1.09e-08!32;CL:0000566!1.09e-08!32;CL:0000837!1.09e-08!32;CL:0002320!1.79e-08!46;CL:0000134!1.79e-08!46;CL:0002092!2.17e-07!3;CL:0002540!2.17e-07!3;CL:0000034!3.99e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.07e-14,4;CL:0000766,2.07e-14,4;CL:0000234,2.07e-14,4;CL:0000576,2.07e-14,4;CL:0000235,2.07e-14,4;CL:0000864,2.07e-14,4;CL:0002009,2.07e-14,4;CL:0000040,2.07e-14,4;CL:0000559,2.07e-14,4;CL:0000557,3.45e-14,7;CL:0002476,3.47e-13,2;CL:0000049,2.29e-11,19;CL:0000473,1.76e-08,7;CL:0000355,5.18e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.93e-08!3;DOID:4045!6.93e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.53e-18!32;UBERON:0002371!2.16e-17!16;UBERON:0001474!4.74e-16!22;UBERON:0004765!4.74e-16!22;UBERON:0001434!4.74e-16!22;UBERON:0002384!1.79e-08!46;UBERON:0002390!2.41e-08!45;UBERON:0003061!2.41e-08!45;UBERON:0002193!1.37e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.03e-12,32;UBERON:0002371,1.41e-09,16;UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9;UBERON:0001474,6.03e-07,22;UBERON:0004765,6.03e-07,22;UBERON:0001434,6.03e-07,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,17.6469446409304,14.3439551841274,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0.286533439938757,0,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,1.31796636956512,2.99951365496704,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,0.419854356970974,0.552799895217695,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:167579743..167579760,+ | |||
}} |
Latest revision as of 14:38, 4 August 2015
Short description: | p@chr2:167579743..167579760, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:167579743..167579760, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.07e-14 | 4 |
myeloid leukocyte | 2.07e-14 | 4 |
phagocyte | 2.07e-14 | 4 |
monocyte | 2.07e-14 | 4 |
macrophage | 2.07e-14 | 4 |
tissue-resident macrophage | 2.07e-14 | 4 |
macrophage dendritic cell progenitor | 2.07e-14 | 4 |
monoblast | 2.07e-14 | 4 |
promonocyte | 2.07e-14 | 4 |
granulocyte monocyte progenitor cell | 3.45e-14 | 7 |
bone marrow macrophage | 3.47e-13 | 2 |
common myeloid progenitor | 2.29e-11 | 19 |
defensive cell | 1.76e-08 | 7 |
multi-potent skeletal muscle stem cell | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.03e-12 | 32 |
bone marrow | 1.41e-09 | 16 |
skeletal muscle tissue | 5.18e-07 | 9 |
striated muscle tissue | 5.18e-07 | 9 |
muscle tissue | 5.18e-07 | 9 |
multilaminar epithelium | 5.18e-07 | 9 |
epithelial vesicle | 5.18e-07 | 9 |
musculature | 5.18e-07 | 9 |
somite | 5.18e-07 | 9 |
myotome | 5.18e-07 | 9 |
presomitic mesoderm | 5.18e-07 | 9 |
presumptive segmental plate | 5.18e-07 | 9 |
dermomyotome | 5.18e-07 | 9 |
trunk paraxial mesoderm | 5.18e-07 | 9 |
bone element | 6.03e-07 | 22 |
skeletal element | 6.03e-07 | 22 |
skeletal system | 6.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.21e-20 | 3 |
muscle cancer | 6.21e-20 | 3 |
organ system cancer | 2.88e-10 | 6 |