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FFCP PHASE1:Mm9::chr12:111685298..111685333,+: Difference between revisions

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{{FFCP|EntrezGene=26931|HGNC=|MCL_coexpression_id=0|UniProt=Q6ZQK4|association_with_transcript=-55bp_to_NM_001135001,uc007pbj.2,uc011yur.1_5end|description=CAGE_peak_5_at_Ppp2r5c_5end|id=chr12:111685298..111685333,+|ontology_enrichment_celltype=CL:0000117!1.04e-10!23;CL:0000337!1.04e-10!23;CL:0002321!2.46e-08!70;CL:0000220!2.46e-08!70;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.05e-07!43;CL:0000055!5.31e-07!50;CL:0000540!6.47e-07!33;CL:0000047!6.47e-07!33;CL:0000031!6.47e-07!33;CL:0000404!6.47e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-14,23;CL:0000337,6.27e-14,23;CL:0002321,1.68e-11,70;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33;CL:0002319,3.28e-08,43;CL:0000393,6.70e-08,39;CL:0000211,6.70e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.65e-11!75;UBERON:0001016!6.65e-11!75;UBERON:0002020!1.54e-10!34;UBERON:0001049!2.00e-10!52;UBERON:0005068!2.00e-10!52;UBERON:0006241!2.00e-10!52;UBERON:0007135!2.00e-10!52;UBERON:0001017!3.13e-10!73;UBERON:0005743!3.13e-10!73;UBERON:0002616!4.28e-09!49;UBERON:0000955!8.56e-09!50;UBERON:0006238!8.56e-09!50;UBERON:0002791!3.02e-08!29;UBERON:0003528!3.02e-08!29;UBERON:0001893!3.02e-08!29;UBERON:0000033!8.62e-08!63;UBERON:0004121!2.18e-07!102;UBERON:0000924!2.18e-07!102;UBERON:0006601!2.18e-07!102;UBERON:0003080!2.25e-07!40;UBERON:0002780!3.63e-07!39;UBERON:0001890!3.63e-07!39;UBERON:0006240!3.63e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-10,54;UBERON:0002020,2.80e-10,34;UBERON:0001016,3.09e-10,75;UBERON:0001017,2.37e-09,73;UBERON:0001049,2.68e-09,52;UBERON:0005068,2.68e-09,52;UBERON:0006241,2.68e-09,52;UBERON:0007135,2.68e-09,52;UBERON:0004121,2.94e-07,95;UBERON:0000924,2.94e-07,95;UBERON:0006601,2.94e-07,95;UBERON:0003528,4.07e-07,29;UBERON:0002791,4.07e-07,29;UBERON:0001893,4.07e-07,29|phase1_expression=1.12104192973356,3.14077866875425,2.72999543633722,3.62957053568196,4.50806156951712,0.671517087647559,0.467225281191051,0.387369970324729,0.140788722151667,0.234064526321993,0.34243593645101,0.319088635981346,0.513602189793617,0.34968160967599,0,0,0,0.157731082679119,0,0,13.0116233931137,0.297872853602656,0.261199789138935,1.11994695955385,0.68822784320151,0.57423196411502,2.15380998079537,1.50829862880122,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,1.49611180822643,1.02084678131185,1.67412652294763,2.3440060335714,2.61761871986899,3.52938892818609,2.04913645487534,2.42755176515577,0.377690453926732,0,0.734187008646726,2.34717403304412,0.218025156380447,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,1.14613375975503,2.06268836910977,2.02316460859598,1.5869729378161,1.90149421051854,1.0165335962074,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.768436610643109,1.97010263386108,1.08004750665353,0.841299845405528,4.85606673486466,1.98781686856452,0.857435594504678,1.72521847832825,2.75765635983006,1.10115880999389,6.2566795661742,3.37934373163736,0.527545150920775,1.64677758484337,1.56274011167028,5.862842979029,2.8138130501584,3.51435969886663,1.47314292736834,2.70506193518296,1.3047961207771,1.21161909333094,1.51143120213571,1.73918693221007,0.860423876981386,0,1.07940638327563,0,0,1.40444420131752,0.852151612890289,0.779358013808606,1.41335829804136,1.26759077799012,0,5.09610479413291,7.11066703153331,0.865964164044856,1.52015919285059,0,1.59857431606684,0,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0.766371165625774,0.239630249011841,1.19980546198682,0.254140454146129,1.04853447583376,0.915001205637253,1.00523481690292,2.78118912307642,1.79000820131231,1.45451631191692,1.62241263067758,0.407357455401265,0.373220911830279,0.252722758433675,1.26265113531884,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.544291993210623,0.2562274405697,0.655912071918102,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0.828503090142008,0.469052119962192,0.720248245844059,0,0.196764231747404,0.771335564436891,0,1.3413670069981,1.05088808130453,1.6455984991348,1.14917224855367,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,0.420579897128254,0.720332286654991,1.32167513193519,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,1.11189021922435,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.864552199498777,0.995706366271836,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0,0.140271639780637,0.316182685621286,0.295220295959204,0.627994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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:26931
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:Q6ZQK4
|association_with_transcript=-55bp_to_NM_001135001,uc007pbj.2,uc011yur.1_5end
|cluster_id=chr12:111685298..111685333,+
|description=CAGE_peak_5_at_Ppp2r5c_5end
|id=chr12:111685298..111685333,+
|ontology_enrichment_celltype=CL:0000117!1.04e-10!23;CL:0000337!1.04e-10!23;CL:0002321!2.46e-08!70;CL:0000220!2.46e-08!70;CL:0000221!2.61e-07!44;CL:0000133!2.61e-07!44;CL:0002319!5.05e-07!43;CL:0000055!5.31e-07!50;CL:0000540!6.47e-07!33;CL:0000047!6.47e-07!33;CL:0000031!6.47e-07!33;CL:0000404!6.47e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-14,23;CL:0000337,6.27e-14,23;CL:0002321,1.68e-11,70;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33;CL:0002319,3.28e-08,43;CL:0000393,6.70e-08,39;CL:0000211,6.70e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.65e-11!75;UBERON:0001016!6.65e-11!75;UBERON:0002020!1.54e-10!34;UBERON:0001049!2.00e-10!52;UBERON:0005068!2.00e-10!52;UBERON:0006241!2.00e-10!52;UBERON:0007135!2.00e-10!52;UBERON:0001017!3.13e-10!73;UBERON:0005743!3.13e-10!73;UBERON:0002616!4.28e-09!49;UBERON:0000955!8.56e-09!50;UBERON:0006238!8.56e-09!50;UBERON:0002791!3.02e-08!29;UBERON:0003528!3.02e-08!29;UBERON:0001893!3.02e-08!29;UBERON:0000033!8.62e-08!63;UBERON:0004121!2.18e-07!102;UBERON:0000924!2.18e-07!102;UBERON:0006601!2.18e-07!102;UBERON:0003080!2.25e-07!40;UBERON:0002780!3.63e-07!39;UBERON:0001890!3.63e-07!39;UBERON:0006240!3.63e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-10,54;UBERON:0002020,2.80e-10,34;UBERON:0001016,3.09e-10,75;UBERON:0001017,2.37e-09,73;UBERON:0001049,2.68e-09,52;UBERON:0005068,2.68e-09,52;UBERON:0006241,2.68e-09,52;UBERON:0007135,2.68e-09,52;UBERON:0004121,2.94e-07,95;UBERON:0000924,2.94e-07,95;UBERON:0006601,2.94e-07,95;UBERON:0003528,4.07e-07,29;UBERON:0002791,4.07e-07,29;UBERON:0001893,4.07e-07,29
|phase1_expression=1.12104192973356,3.14077866875425,2.72999543633722,3.62957053568196,4.50806156951712,0.671517087647559,0.467225281191051,0.387369970324729,0.140788722151667,0.234064526321993,0.34243593645101,0.319088635981346,0.513602189793617,0.34968160967599,0,0,0,0.157731082679119,0,0,13.0116233931137,0.297872853602656,0.261199789138935,1.11994695955385,0.68822784320151,0.57423196411502,2.15380998079537,1.50829862880122,1.14014051673824,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,1.49611180822643,1.02084678131185,1.67412652294763,2.3440060335714,2.61761871986899,3.52938892818609,2.04913645487534,2.42755176515577,0.377690453926732,0,0.734187008646726,2.34717403304412,0.218025156380447,0.219686182734472,0.972149495371417,0.279972843250725,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,1.14613375975503,2.06268836910977,2.02316460859598,1.5869729378161,1.90149421051854,1.0165335962074,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.768436610643109,1.97010263386108,1.08004750665353,0.841299845405528,4.85606673486466,1.98781686856452,0.857435594504678,1.72521847832825,2.75765635983006,1.10115880999389,6.2566795661742,3.37934373163736,0.527545150920775,1.64677758484337,1.56274011167028,5.862842979029,2.8138130501584,3.51435969886663,1.47314292736834,2.70506193518296,1.3047961207771,1.21161909333094,1.51143120213571,1.73918693221007,0.860423876981386,0,1.07940638327563,0,0,1.40444420131752,0.852151612890289,0.779358013808606,1.41335829804136,1.26759077799012,0,5.09610479413291,7.11066703153331,0.865964164044856,1.52015919285059,0,1.59857431606684,0,0.593768556259299,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0,0,0.585561594023094,0.628340120440365,0.766371165625774,0.239630249011841,1.19980546198682,0.254140454146129,1.04853447583376,0.915001205637253,1.00523481690292,2.78118912307642,1.79000820131231,1.45451631191692,1.62241263067758,0.407357455401265,0.373220911830279,0.252722758433675,1.26265113531884,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.544291993210623,0.2562274405697,0.655912071918102,0,0,0.378212160335639,0.351902248327898,0.657587197282725,0.278047249225598,1.39300866608867,0.205782136407943,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0.828503090142008,0.469052119962192,0.720248245844059,0,0.196764231747404,0.771335564436891,0,1.3413670069981,1.05088808130453,1.6455984991348,1.14917224855367,0.729619285912702,0.730999937126662,0.219550115291051,0.536825675041487,0.420579897128254,0.720332286654991,1.32167513193519,0.264450566663544,0,0.232236671860439,0.128867461322093,0.403367049246685,1.11189021922435,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.864552199498777,0.995706366271836,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0,0.140271639780637,0.316182685621286,0.295220295959204,0.627994911365499,0.246794327843601,0,0.166845105716094,0.786235980452812,0,0,0.482354319504834,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0,0.252578877947112,0.717589654087649,1.4473305640901,0.184753190166605,0.947457058852424,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.585400943573396,0.472905432318573,0.44292937929755,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,1.28440471990234,1.17211686592203,0.163934945376675,0.504941854408746,0,0,0.861693590931196,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,1.03371317267288,0.727067458955011,0,0,1.05418608574999,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,0.709360934569094,0,0.164549020602121,0.913394847343798,0.704015124191131,0.42366414172764,0.220528398054962,0.98931751764888,0.161464426695906,0.784068024066026,0.477489376012546,0.164140899745061,0,2.59595422814714,0.512612642393558,0.82554747185289,0.555583582109135,0.188368457004691,0.136694227721025,0,0.679913719975421,0.139951452323658,0.552799895217695,0,0.474503990371703,0,0.756037385752609,0,0.218362563746178,0.404593039154462,0.247960367176008,0.785267825952089,0.90730481304255,1.24267862617385,47.9138997881562,0.897099276263873,0.165458490457098,0.194451188344048,0.645799117388655,1.18269287843545,0.58678619322877,0.911430693907651,0.314578033277133,12.0792060413003,20.7381604505663,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.15241361331,0,0.0974578807397524,0.865906574762965,0.116876902181569,0.680191150845634,0.887943813496259,0.62799699626633,0.335769232728157,0.19318959403219,1.31377732815827,0.183151624267265,0,0.501572104035363,0.564751842617067,2.76195141904306,1.14579102687879,5.499301834998,2.05524755931193,1.5107877947794,2.02506750069542,0.900642406448441,0.453142408984205,1.55328093525546,0.726511433089237,1.19707462020309,0.170733605754134,0.243106717068294,1.04806581313991,1.10306105070008,0.666740183404846,0.412070114477788,0,1.01078884705519,0.50695859978048,0.754505365544305,1.40462261204824,1.15245274328765,1.09127391015665,0,1.27472758539341,1.35036454324594,1.64834360321323,1.03039244094078,0,0.70990322463735,1.1921809497366,0.726732083161643,0.658765662907314,0.676916863133412,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,1.30498519936592,0.788035859004508,0.409231043169689,2.32405261778949,0,0.499621155875892,0.233931608445408,0,0,0.441182838239031,0.695603506861264
|short_description=p5@Ppp2r5c
}}

Revision as of 17:40, 4 August 2015

Short description:p5@Ppp2r5c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ppp2r5c_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -55bp_to_NM_001135001, uc007pbj.2, uc011yur.1_5end
EntrezGene:26931
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ppp2r5c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G547.91
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E220.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.27e-1423
neuroblast (sensu Vertebrata)6.27e-1423
embryonic cell1.68e-1170
ectodermal cell1.23e-0844
neurectodermal cell1.23e-0844
neuron1.56e-0833
neuronal stem cell1.56e-0833
neuroblast1.56e-0833
electrically signaling cell1.56e-0833
neural cell3.28e-0843
electrically responsive cell6.70e-0839
electrically active cell6.70e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.02e-1054
gray matter2.80e-1034
nervous system3.09e-1075
central nervous system2.37e-0973
neural tube2.68e-0952
neural rod2.68e-0952
future spinal cord2.68e-0952
neural keel2.68e-0952
ectoderm-derived structure2.94e-0795
ectoderm2.94e-0795
presumptive ectoderm2.94e-0795
brain grey matter4.07e-0729
regional part of telencephalon4.07e-0729
telencephalon4.07e-0729
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