FFCP PHASE1:Mm9::chr9:121614221..121614238,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:121614221..121614238,+|id=chr9:121614221..121614238,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,2.26e-13,2;CL:0000738,4.97e-09,17;CL:0002087,4.97e-09,17;CL:0002031,1.45e-08,25;CL:0000213,1.33e-07,1;CL:0002078,1.33e-07,1;CL:0000115,1.33e-07,1;CL:0002262,1.33e-07,1;CL:1000398,1.33e-07,1;CL:0000815,1.53e-07,1;CL:0000792,1.53e-07,1;CL:0000945,1.78e-07,1;CL:0000236,1.78e-07,1;CL:0000826,1.78e-07,1;CL:0002194,3.94e-07,4;CL:0000766,3.94e-07,4;CL:0000234,3.94e-07,4;CL:0000576,3.94e-07,4;CL:0000235,3.94e-07,4;CL:0000864,3.94e-07,4;CL:0002009,3.94e-07,4;CL:0000040,3.94e-07,4;CL:0000559,3.94e-07,4;CL:0000355,4.50e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.33e-07,1;UBERON:0001281,1.33e-07,1;UBERON:0000353,1.33e-07,1;UBERON:0003497,1.33e-07,1;UBERON:0003909,1.33e-07,1;UBERON:0003928,1.33e-07,1;UBERON:0003835,1.33e-07,1;UBERON:0003513,1.33e-07,1;UBERON:0001280,1.33e-07,1;UBERON:0004647,1.33e-07,1;UBERON:0002294,1.33e-07,1;UBERON:0001173,1.33e-07,1;UBERON:0004912,1.33e-07,1;UBERON:0005171,1.33e-07,1;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9;UBERON:0002204,7.99e-07,32|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0,1.42035655785734,0,0,0,0.0797721589953364,0.513602189793617,1.04904482902797,0,0,0,0.473193248037357,0.274228867211478,1.27316895539409,0.255129870453209,0.595745707205312,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,5.4409111995798,3.906676722619,2.61761871986899,36.4703522579229,13.6609096991689,3.39857247121808,0,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0.151452386666368,0.151143120213571,1.44932244350839,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0.11981512450592,0,0.508280908292259,0.449371918214468,0,0.251308704225729,0,0,0.20778804455956,0,0,0.373220911830279,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0.584799949701329,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.712262414669021,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,1.12738587736838,0,0,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.403304740547362,0.292373642219257,0.769694733122636,0.350630706544707,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.754505365544305,0.187283014939765,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:121614221..121614238,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:121614221..121614238,+ | |||
|description=CAGE_peak_at_chr9:121614221..121614238,+ | |||
|id=chr9:121614221..121614238,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.26e-13,2;CL:0000738,4.97e-09,17;CL:0002087,4.97e-09,17;CL:0002031,1.45e-08,25;CL:0000213,1.33e-07,1;CL:0002078,1.33e-07,1;CL:0000115,1.33e-07,1;CL:0002262,1.33e-07,1;CL:1000398,1.33e-07,1;CL:0000815,1.53e-07,1;CL:0000792,1.53e-07,1;CL:0000945,1.78e-07,1;CL:0000236,1.78e-07,1;CL:0000826,1.78e-07,1;CL:0002194,3.94e-07,4;CL:0000766,3.94e-07,4;CL:0000234,3.94e-07,4;CL:0000576,3.94e-07,4;CL:0000235,3.94e-07,4;CL:0000864,3.94e-07,4;CL:0002009,3.94e-07,4;CL:0000040,3.94e-07,4;CL:0000559,3.94e-07,4;CL:0000355,4.50e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.33e-07,1;UBERON:0001281,1.33e-07,1;UBERON:0000353,1.33e-07,1;UBERON:0003497,1.33e-07,1;UBERON:0003909,1.33e-07,1;UBERON:0003928,1.33e-07,1;UBERON:0003835,1.33e-07,1;UBERON:0003513,1.33e-07,1;UBERON:0001280,1.33e-07,1;UBERON:0004647,1.33e-07,1;UBERON:0002294,1.33e-07,1;UBERON:0001173,1.33e-07,1;UBERON:0004912,1.33e-07,1;UBERON:0005171,1.33e-07,1;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9;UBERON:0002204,7.99e-07,32 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.33575854382378,0,1.42035655785734,0,0,0,0.0797721589953364,0.513602189793617,1.04904482902797,0,0,0,0.473193248037357,0.274228867211478,1.27316895539409,0.255129870453209,0.595745707205312,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,5.4409111995798,3.906676722619,2.61761871986899,36.4703522579229,13.6609096991689,3.39857247121808,0,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0.514518872071894,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0,0.274462930807229,0.52091337055676,0,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0.151452386666368,0.151143120213571,1.44932244350839,0,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0,0,0,0.209446706813455,0,0.11981512450592,0,0.508280908292259,0.449371918214468,0,0.251308704225729,0,0,0.20778804455956,0,0,0.373220911830279,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0.584799949701329,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0,0.477937595905104,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.712262414669021,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0,0.535106452806212,0.164549020602121,0.608929898229199,0,0.42366414172764,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,1.12738587736838,0,0,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.104859344425711,0.724752362478018,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.403304740547362,0.292373642219257,0.769694733122636,0.350630706544707,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.754505365544305,0.187283014939765,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:121614221..121614238,+ | |||
}} |
Latest revision as of 18:28, 4 August 2015
Short description: | p@chr9:121614221..121614238, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121614221..121614238, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.26e-13 | 2 |
leukocyte | 4.97e-09 | 17 |
nongranular leukocyte | 4.97e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 1.45e-08 | 25 |
lining cell | 1.33e-07 | 1 |
meso-epithelial cell | 1.33e-07 | 1 |
endothelial cell | 1.33e-07 | 1 |
endothelial cell of sinusoid | 1.33e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.33e-07 | 1 |
regulatory T cell | 1.53e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.53e-07 | 1 |
lymphocyte of B lineage | 1.78e-07 | 1 |
B cell | 1.78e-07 | 1 |
pro-B cell | 1.78e-07 | 1 |
monopoietic cell | 3.94e-07 | 4 |
myeloid leukocyte | 3.94e-07 | 4 |
phagocyte | 3.94e-07 | 4 |
monocyte | 3.94e-07 | 4 |
macrophage | 3.94e-07 | 4 |
tissue-resident macrophage | 3.94e-07 | 4 |
macrophage dendritic cell progenitor | 3.94e-07 | 4 |
monoblast | 3.94e-07 | 4 |
promonocyte | 3.94e-07 | 4 |
multi-potent skeletal muscle stem cell | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.33e-07 | 1 |
hepatic sinusoid | 1.33e-07 | 1 |
parenchyma | 1.33e-07 | 1 |
abdomen blood vessel | 1.33e-07 | 1 |
sinusoid | 1.33e-07 | 1 |
digestive system duct | 1.33e-07 | 1 |
abdominal segment blood vessel | 1.33e-07 | 1 |
trunk blood vessel | 1.33e-07 | 1 |
liver parenchyma | 1.33e-07 | 1 |
liver lobule | 1.33e-07 | 1 |
biliary system | 1.33e-07 | 1 |
biliary tree | 1.33e-07 | 1 |
biliary bud | 1.33e-07 | 1 |
hepatic duct | 1.33e-07 | 1 |
skeletal muscle tissue | 4.50e-07 | 9 |
striated muscle tissue | 4.50e-07 | 9 |
muscle tissue | 4.50e-07 | 9 |
multilaminar epithelium | 4.50e-07 | 9 |
epithelial vesicle | 4.50e-07 | 9 |
musculature | 4.50e-07 | 9 |
somite | 4.50e-07 | 9 |
myotome | 4.50e-07 | 9 |
presomitic mesoderm | 4.50e-07 | 9 |
presumptive segmental plate | 4.50e-07 | 9 |
dermomyotome | 4.50e-07 | 9 |
trunk paraxial mesoderm | 4.50e-07 | 9 |
musculoskeletal system | 7.99e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-20 | 3 |
muscle cancer | 4.00e-20 | 3 |
organ system cancer | 2.32e-10 | 6 |