FFCP PHASE1:Mm9::chr12:113348823..113348830,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=56|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:113348823..113348830,+|id=chr12:113348823..113348830,+|ontology_enrichment_celltype=CL:0000708!3.90e-11!2;CL:0002614!9.74e-08!3;CL:0000151!1.05e-07!3;CL:0000499!1.05e-07!3;CL:0000327!1.05e-07!3|ontology_enrichment_celltype_v019_2=CL:0002614,1.12e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!8.21e-16!3;UBERON:0000478!8.21e-16!3;UBERON:0000158!8.21e-16!3;UBERON:0002950!1.05e-11!4;UBERON:0001891!1.05e-11!4;UBERON:0009616!1.05e-11!4;UBERON:0001987!1.94e-11!2;UBERON:0003124!1.94e-11!2;UBERON:0004340!1.94e-11!2;UBERON:0003210!3.90e-11!2;UBERON:0003975!1.13e-09!5;UBERON:0002298!5.70e-08!6;UBERON:0002038!9.74e-08!3;UBERON:0002308!9.74e-08!3;UBERON:0009663!9.74e-08!3;UBERON:0009661!9.74e-08!3;UBERON:0006331!9.74e-08!3;UBERON:0000125!9.74e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.75e-23,2;UBERON:0003124,5.75e-23,2;UBERON:0004340,5.75e-23,2;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0002038,1.12e-15,3;UBERON:0009663,1.12e-15,3;UBERON:0009661,1.12e-15,3;UBERON:0000125,1.12e-15,3;UBERON:0002308,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0002950,4.02e-12,4;UBERON:0001891,4.02e-12,4;UBERON:0009616,4.02e-12,4;UBERON:0010286,4.02e-12,4;UBERON:0003975,4.56e-10,5;UBERON:0003134,8.61e-07,8;UBERON:0002420,9.78e-07,8;UBERON:0007245,9.78e-07,8;UBERON:0010009,9.78e-07,8;UBERON:0010011,9.78e-07,8;UBERON:0000454,9.78e-07,8|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33613611772018,0.63549621259146,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:113348823..113348830,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:113348823..113348830,+ | |||
|description=CAGE_peak_at_chr12:113348823..113348830,+ | |||
|id=chr12:113348823..113348830,+ | |||
|ontology_enrichment_celltype=CL:0000708!3.90e-11!2;CL:0002614!9.74e-08!3;CL:0000151!1.05e-07!3;CL:0000499!1.05e-07!3;CL:0000327!1.05e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.12e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.21e-16!3;UBERON:0000478!8.21e-16!3;UBERON:0000158!8.21e-16!3;UBERON:0002950!1.05e-11!4;UBERON:0001891!1.05e-11!4;UBERON:0009616!1.05e-11!4;UBERON:0001987!1.94e-11!2;UBERON:0003124!1.94e-11!2;UBERON:0004340!1.94e-11!2;UBERON:0003210!3.90e-11!2;UBERON:0003975!1.13e-09!5;UBERON:0002298!5.70e-08!6;UBERON:0002038!9.74e-08!3;UBERON:0002308!9.74e-08!3;UBERON:0009663!9.74e-08!3;UBERON:0009661!9.74e-08!3;UBERON:0006331!9.74e-08!3;UBERON:0000125!9.74e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.75e-23,2;UBERON:0003124,5.75e-23,2;UBERON:0004340,5.75e-23,2;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0002038,1.12e-15,3;UBERON:0009663,1.12e-15,3;UBERON:0009661,1.12e-15,3;UBERON:0000125,1.12e-15,3;UBERON:0002308,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0002950,4.02e-12,4;UBERON:0001891,4.02e-12,4;UBERON:0009616,4.02e-12,4;UBERON:0010286,4.02e-12,4;UBERON:0003975,4.56e-10,5;UBERON:0003134,8.61e-07,8;UBERON:0002420,9.78e-07,8;UBERON:0007245,9.78e-07,8;UBERON:0010009,9.78e-07,8;UBERON:0010011,9.78e-07,8;UBERON:0000454,9.78e-07,8 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33613611772018,0.63549621259146,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:113348823..113348830,+ | |||
}} |
Latest revision as of 18:50, 4 August 2015
Short description: | p@chr12:113348823..113348830, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:113348823..113348830, + |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 5.75e-23 | 2 |
chorion | 5.75e-23 | 2 |
allantois | 5.75e-23 | 2 |
extraembryonic membrane | 8.02e-16 | 3 |
extraembryonic structure | 8.02e-16 | 3 |
membranous layer | 8.02e-16 | 3 |
substantia nigra | 1.12e-15 | 3 |
telencephalic nucleus | 1.12e-15 | 3 |
midbrain nucleus | 1.12e-15 | 3 |
neural nucleus | 1.12e-15 | 3 |
nucleus of brain | 1.12e-15 | 3 |
embryonic uterus | 3.12e-12 | 4 |
uterus | 3.12e-12 | 4 |
regional part of midbrain | 4.02e-12 | 4 |
midbrain | 4.02e-12 | 4 |
presumptive midbrain | 4.02e-12 | 4 |
midbrain neural tube | 4.02e-12 | 4 |
internal female genitalia | 4.56e-10 | 5 |
female reproductive organ | 8.61e-07 | 8 |
basal ganglion | 9.78e-07 | 8 |
nuclear complex of neuraxis | 9.78e-07 | 8 |
aggregate regional part of brain | 9.78e-07 | 8 |
collection of basal ganglia | 9.78e-07 | 8 |
cerebral subcortex | 9.78e-07 | 8 |