FFCP PHASE1:Mm9::chr10:79567046..79567057,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79567046..79567057,-|id=chr10:79567046..79567057,-|ontology_enrichment_celltype=CL:0000066!1.24e-13!25;CL:0000239!1.38e-13!6;CL:0000677!1.38e-13!6;CL:0000212!1.38e-13!6;CL:0000584!1.38e-13!6;CL:0000075!1.35e-11!7;CL:0000222!6.48e-11!7;CL:0000473!1.03e-10!3;CL:0000627!1.03e-10!3;CL:0000682!1.03e-10!3;CL:0000192!4.58e-10!3;CL:0000359!4.58e-10!3;CL:0002539!4.58e-10!3;CL:0000514!4.58e-10!3;CL:0002076!1.10e-09!15;CL:0000223!4.72e-09!20;CL:0002563!6.12e-09!9;CL:0002251!6.12e-09!9;CL:0000680!1.72e-08!6;CL:0000183!1.72e-08!6;CL:0000187!1.72e-08!6;CL:0000056!1.72e-08!6|ontology_enrichment_celltype_v019_2=CL:0000682,4.72e-23,3;CL:0000239,2.69e-20,6;CL:0000677,2.69e-20,6;CL:0000584,2.69e-20,6;CL:0000066,2.02e-18,25;CL:0000075,1.88e-17,7;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0002076,2.33e-12,15;CL:0000192,2.21e-10,3;CL:0000359,2.21e-10,3;CL:0002539,2.21e-10,3;CL:0000514,2.21e-10,3;CL:0000473,3.03e-10,7;CL:0000223,2.86e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.65e-16!15;UBERON:0004923!1.72e-11!24;UBERON:0001242!3.11e-11!13;UBERON:0000060!3.11e-11!13;UBERON:0001262!3.11e-11!13;UBERON:0004786!3.11e-11!13;UBERON:0000055!3.31e-10!5;UBERON:0001981!3.31e-10!5;UBERON:0002049!3.31e-10!5;UBERON:0007500!3.31e-10!5;UBERON:0007798!3.31e-10!5;UBERON:0004537!3.31e-10!5;UBERON:0006965!3.31e-10!5;UBERON:0001135!4.58e-10!3;UBERON:0004237!4.58e-10!3;UBERON:0004695!4.58e-10!3;UBERON:0002111!4.58e-10!3;UBERON:0004178!4.58e-10!3;UBERON:0003350!6.12e-09!9;UBERON:0004808!6.12e-09!9;UBERON:0001277!6.12e-09!9;UBERON:0000947!1.20e-07!4;UBERON:0001637!1.20e-07!4;UBERON:0003509!1.20e-07!4;UBERON:0004573!1.20e-07!4;UBERON:0004571!1.20e-07!4;UBERON:0010191!1.20e-07!4;UBERON:0004572!1.20e-07!4;UBERON:0001962!1.44e-07!2;UBERON:0001961!1.44e-07!2;UBERON:0001744!1.44e-07!2;UBERON:0000485!3.02e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.13e-17,15;UBERON:0001962,1.14e-15,2;UBERON:0001961,1.14e-15,2;UBERON:0001744,1.14e-15,2;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000485,3.19e-11,11;UBERON:0004923,5.68e-11,24;UBERON:0002465,9.09e-11,3;UBERON:0001135,2.21e-10,3;UBERON:0004237,2.21e-10,3;UBERON:0004695,2.21e-10,3;UBERON:0002111,2.21e-10,3;UBERON:0004178,2.21e-10,3;UBERON:0001242,1.55e-09,13;UBERON:0001262,1.55e-09,13;UBERON:0004786,1.55e-09,13;UBERON:0003199,1.47e-08,1;UBERON:0000947,5.19e-08,4;UBERON:0001637,5.19e-08,4;UBERON:0004573,5.19e-08,4;UBERON:0003509,5.19e-08,4;UBERON:0004571,5.19e-08,4;UBERON:0010191,5.19e-08,4;UBERON:0004572,5.19e-08,4|phase1_expression=0,5.58360652222978,5.0049916332849,0,0.500895729946347,1.51091344720701,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,1.60586496747019,4.59385571292016,2.15380998079537,4.52489588640367,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.709638518536602,1.28482726513177,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0.649473123033642,1.01343946190039,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:79567046..79567057,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:79567046..79567057,- | |||
|description=CAGE_peak_at_chr10:79567046..79567057,- | |||
|id=chr10:79567046..79567057,- | |||
|ontology_enrichment_celltype=CL:0000066!1.24e-13!25;CL:0000239!1.38e-13!6;CL:0000677!1.38e-13!6;CL:0000212!1.38e-13!6;CL:0000584!1.38e-13!6;CL:0000075!1.35e-11!7;CL:0000222!6.48e-11!7;CL:0000473!1.03e-10!3;CL:0000627!1.03e-10!3;CL:0000682!1.03e-10!3;CL:0000192!4.58e-10!3;CL:0000359!4.58e-10!3;CL:0002539!4.58e-10!3;CL:0000514!4.58e-10!3;CL:0002076!1.10e-09!15;CL:0000223!4.72e-09!20;CL:0002563!6.12e-09!9;CL:0002251!6.12e-09!9;CL:0000680!1.72e-08!6;CL:0000183!1.72e-08!6;CL:0000187!1.72e-08!6;CL:0000056!1.72e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.72e-23,3;CL:0000239,2.69e-20,6;CL:0000677,2.69e-20,6;CL:0000584,2.69e-20,6;CL:0000066,2.02e-18,25;CL:0000075,1.88e-17,7;CL:0002563,1.19e-13,9;CL:0002251,1.19e-13,9;CL:0002076,2.33e-12,15;CL:0000192,2.21e-10,3;CL:0000359,2.21e-10,3;CL:0002539,2.21e-10,3;CL:0000514,2.21e-10,3;CL:0000473,3.03e-10,7;CL:0000223,2.86e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.65e-16!15;UBERON:0004923!1.72e-11!24;UBERON:0001242!3.11e-11!13;UBERON:0000060!3.11e-11!13;UBERON:0001262!3.11e-11!13;UBERON:0004786!3.11e-11!13;UBERON:0000055!3.31e-10!5;UBERON:0001981!3.31e-10!5;UBERON:0002049!3.31e-10!5;UBERON:0007500!3.31e-10!5;UBERON:0007798!3.31e-10!5;UBERON:0004537!3.31e-10!5;UBERON:0006965!3.31e-10!5;UBERON:0001135!4.58e-10!3;UBERON:0004237!4.58e-10!3;UBERON:0004695!4.58e-10!3;UBERON:0002111!4.58e-10!3;UBERON:0004178!4.58e-10!3;UBERON:0003350!6.12e-09!9;UBERON:0004808!6.12e-09!9;UBERON:0001277!6.12e-09!9;UBERON:0000947!1.20e-07!4;UBERON:0001637!1.20e-07!4;UBERON:0003509!1.20e-07!4;UBERON:0004573!1.20e-07!4;UBERON:0004571!1.20e-07!4;UBERON:0010191!1.20e-07!4;UBERON:0004572!1.20e-07!4;UBERON:0001962!1.44e-07!2;UBERON:0001961!1.44e-07!2;UBERON:0001744!1.44e-07!2;UBERON:0000485!3.02e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.13e-17,15;UBERON:0001962,1.14e-15,2;UBERON:0001961,1.14e-15,2;UBERON:0001744,1.14e-15,2;UBERON:0003350,1.19e-13,9;UBERON:0004808,1.19e-13,9;UBERON:0001277,1.19e-13,9;UBERON:0000485,3.19e-11,11;UBERON:0004923,5.68e-11,24;UBERON:0002465,9.09e-11,3;UBERON:0001135,2.21e-10,3;UBERON:0004237,2.21e-10,3;UBERON:0004695,2.21e-10,3;UBERON:0002111,2.21e-10,3;UBERON:0004178,2.21e-10,3;UBERON:0001242,1.55e-09,13;UBERON:0001262,1.55e-09,13;UBERON:0004786,1.55e-09,13;UBERON:0003199,1.47e-08,1;UBERON:0000947,5.19e-08,4;UBERON:0001637,5.19e-08,4;UBERON:0004573,5.19e-08,4;UBERON:0003509,5.19e-08,4;UBERON:0004571,5.19e-08,4;UBERON:0010191,5.19e-08,4;UBERON:0004572,5.19e-08,4 | |||
|phase1_expression=0,5.58360652222978,5.0049916332849,0,0.500895729946347,1.51091344720701,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,1.60586496747019,4.59385571292016,2.15380998079537,4.52489588640367,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.709638518536602,1.28482726513177,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0.649473123033642,1.01343946190039,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:79567046..79567057,- | |||
}} |
Latest revision as of 19:16, 4 August 2015
Short description: | p@chr10:79567046..79567057, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79567046..79567057, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.72e-23 | 3 |
brush border epithelial cell | 2.69e-20 | 6 |
gut absorptive cell | 2.69e-20 | 6 |
enterocyte | 2.69e-20 | 6 |
epithelial cell | 2.02e-18 | 25 |
columnar/cuboidal epithelial cell | 1.88e-17 | 7 |
intestinal epithelial cell | 1.19e-13 | 9 |
epithelial cell of alimentary canal | 1.19e-13 | 9 |
endo-epithelial cell | 2.33e-12 | 15 |
smooth muscle cell | 2.21e-10 | 3 |
vascular associated smooth muscle cell | 2.21e-10 | 3 |
aortic smooth muscle cell | 2.21e-10 | 3 |
smooth muscle myoblast | 2.21e-10 | 3 |
defensive cell | 3.03e-10 | 7 |
endodermal cell | 2.86e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.13e-17 | 15 |
gut-associated lymphoid tissue | 1.14e-15 | 2 |
mucosa-associated lymphoid tissue | 1.14e-15 | 2 |
lymphoid tissue | 1.14e-15 | 2 |
epithelium of mucosa | 1.19e-13 | 9 |
gastrointestinal system epithelium | 1.19e-13 | 9 |
intestinal epithelium | 1.19e-13 | 9 |
simple columnar epithelium | 3.19e-11 | 11 |
organ component layer | 5.68e-11 | 24 |
lymphoid system | 9.09e-11 | 3 |
smooth muscle tissue | 2.21e-10 | 3 |
blood vessel smooth muscle | 2.21e-10 | 3 |
arterial system smooth muscle | 2.21e-10 | 3 |
artery smooth muscle tissue | 2.21e-10 | 3 |
aorta smooth muscle tissue | 2.21e-10 | 3 |
intestinal mucosa | 1.55e-09 | 13 |
wall of intestine | 1.55e-09 | 13 |
gastrointestinal system mucosa | 1.55e-09 | 13 |
egg chamber | 1.47e-08 | 1 |
aorta | 5.19e-08 | 4 |
artery | 5.19e-08 | 4 |
systemic artery | 5.19e-08 | 4 |
arterial blood vessel | 5.19e-08 | 4 |
systemic arterial system | 5.19e-08 | 4 |
aortic system | 5.19e-08 | 4 |
arterial system | 5.19e-08 | 4 |